RNA–Protein interactions for RNA: ENST00000587945.1

VMP1-206, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-206ENST00000587945 VENTXO95231 258 aa12.19□□□□□ -0.46
VMP1-206ENST00000587945 SERPINA1P01009 418 aa12.19□□□□□ -0.46
VMP1-206ENST00000587945 MT-ND5P03915 603 aa12.19□□□□□ -0.46
VMP1-206ENST00000587945 NCK1P16333 377 aa12.19□□□□□ -0.46
VMP1-206ENST00000587945 ZNF26P17031 533 aaPredicted RBP12.19□□□□□ -0.46
VMP1-206ENST00000587945 GSK3BP49841 420 aa12.19□□□□□ -0.46
VMP1-206ENST00000587945 MMP15P51511 669 aa12.19□□□□□ -0.46
VMP1-206ENST00000587945 RAP1BP61224 184 aa12.19□□□□□ -0.46
VMP1-206ENST00000587945 PPP1CBP62140 327 aa12.19□□□□□ -0.46
VMP1-206ENST00000587945 RAP1AP62834 184 aa12.19□□□□□ -0.46
VMP1-206ENST00000587945 TEKQ02763 1124 aa12.19□□□□□ -0.46
VMP1-206ENST00000587945 IFI44LQ53G44 452 aa12.19□□□□□ -0.46
VMP1-206ENST00000587945 SPRNQ5BIV9 151 aa12.19□□□□□ -0.46
VMP1-206ENST00000587945 OTPQ5XKR4 325 aa12.19□□□□□ -0.46
VMP1-206ENST00000587945 FAM205BPQ63HN1 556 aa12.19□□□□□ -0.46
VMP1-206ENST00000587945 FOXL2NBQ6ZUU3 175 aa12.19□□□□□ -0.46
VMP1-206ENST00000587945 FKBP9P1Q75LS8 142 aa12.19□□□□□ -0.46
VMP1-206ENST00000587945 CBLL1Q75N03 491 aa12.19□□□□□ -0.46
VMP1-206ENST00000587945 ARPINQ7Z6K5 226 aa12.19□□□□□ -0.46
VMP1-206ENST00000587945 ACOT11Q8WXI4 607 aaPredicted RBP12.19□□□□□ -0.46
VMP1-206ENST00000587945 CCL17Q92583 94 aa12.19□□□□□ -0.46
VMP1-206ENST00000587945 HSH2DQ96JZ2 352 aa12.19□□□□□ -0.46
VMP1-206ENST00000587945 AP3M1Q9Y2T2 418 aa12.19□□□□□ -0.46
VMP1-206ENST00000587945 TRAV20A0A0B4J274 112 aa12.18□□□□□ -0.46
VMP1-206ENST00000587945 HTR3EA5X5Y0 456 aa12.18□□□□□ -0.46
VMP1-206ENST00000587945 CLDN25C9JDP6 229 aa12.18□□□□□ -0.46
VMP1-206ENST00000587945 HAX1O00165 279 aa12.18□□□□□ -0.46
VMP1-206ENST00000587945 DEAF1O75398 565 aaPredicted RBP12.18□□□□□ -0.46
VMP1-206ENST00000587945 MPZL1O95297 269 aa12.18□□□□□ -0.46
VMP1-206ENST00000587945 AVPP01185 164 aa12.18□□□□□ -0.46
VMP1-206ENST00000587945 MSR1P21757 451 aa12.18□□□□□ -0.46
VMP1-206ENST00000587945 RPL4P36578 427 aaKnown RBP12.18□□□□□ -0.46
VMP1-206ENST00000587945 RBMXP38159 391 aaKnown RBP12.18□□□□□ -0.46
VMP1-206ENST00000587945 GUCA1AP43080 201 aaPredicted RBP12.18□□□□□ -0.46
VMP1-206ENST00000587945 SLC9A3P48764 834 aa12.18□□□□□ -0.46
VMP1-206ENST00000587945 HFEQ30201 348 aa12.18□□□□□ -0.46
VMP1-206ENST00000587945 MBNL2Q5VZF2 373 aaKnown RBP12.18□□□□□ -0.46
VMP1-206ENST00000587945 ACSM5Q6NUN0 579 aa12.18□□□□□ -0.46
VMP1-206ENST00000587945 C1orf229Q6ZS94 237 aaPredicted RBP12.18□□□□□ -0.46
VMP1-206ENST00000587945 MBOAT2Q6ZWT7 520 aa12.18□□□□□ -0.46
VMP1-206ENST00000587945 TSEN54Q7Z6J9 526 aaKnown RBP12.18□□□□□ -0.46
VMP1-206ENST00000587945 TREML1Q86YW5 311 aa12.18□□□□□ -0.46
VMP1-206ENST00000587945 ALDH16A1Q8IZ83 802 aa12.18□□□□□ -0.46
VMP1-206ENST00000587945 FNDC8Q8TC99 324 aa12.18□□□□□ -0.46
VMP1-206ENST00000587945 ELMOD3Q96FG2 381 aa12.18□□□□□ -0.46
VMP1-206ENST00000587945 C4orf45Q96LM5 186 aa12.18□□□□□ -0.46
VMP1-206ENST00000587945 Q96M85 177 aa12.18□□□□□ -0.46
VMP1-206ENST00000587945 POFUT1Q9H488 388 aa12.18□□□□□ -0.46
VMP1-206ENST00000587945 CCDC134Q9H6E4 229 aa12.18□□□□□ -0.46
VMP1-206ENST00000587945 MSL2Q9HCI7 577 aa12.18□□□□□ -0.46
VMP1-206ENST00000587945 POLE4Q9NR33 117 aa12.18□□□□□ -0.46
VMP1-206ENST00000587945 LOC105371242A0A075B767 164 aa12.17□□□□□ -0.46
VMP1-206ENST00000587945 PLSCR5A0PG75 271 aa12.17□□□□□ -0.46
VMP1-206ENST00000587945 IMPA2O14732 288 aa12.17□□□□□ -0.46
VMP1-206ENST00000587945 PLPP2O43688 288 aa12.17□□□□□ -0.46
VMP1-206ENST00000587945 IGHV2-5P01817 119 aa12.17□□□□□ -0.46
VMP1-206ENST00000587945 CD14P08571 375 aa12.17□□□□□ -0.46
VMP1-206ENST00000587945 PCBD1P61457 104 aa12.17□□□□□ -0.46
VMP1-206ENST00000587945 MESTQ5EB52 335 aa12.17□□□□□ -0.46
VMP1-206ENST00000587945 FAM209AQ5JX71 171 aa12.17□□□□□ -0.46
VMP1-206ENST00000587945 C8orf82Q6P1X6 216 aaPredicted RBP12.17□□□□□ -0.46
VMP1-206ENST00000587945 SHQ1Q6PI26 577 aaKnown RBP12.17□□□□□ -0.46
VMP1-206ENST00000587945 UNQ6126/PRO20091Q6UXV3 157 aa12.17□□□□□ -0.46
VMP1-206ENST00000587945 RNF113BQ8IZP6 322 aaKnown RBP12.17□□□□□ -0.46
VMP1-206ENST00000587945 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.17□□□□□ -0.46
VMP1-206ENST00000587945 FAM162AQ96A26 154 aa12.17□□□□□ -0.46
VMP1-206ENST00000587945 FAM46AQ96IP4 442 aaKnown RBP12.17□□□□□ -0.46
VMP1-206ENST00000587945 HOPXQ9BPY8 73 aaPredicted RBP12.17□□□□□ -0.46
VMP1-206ENST00000587945 NMNAT1Q9HAN9 279 aaPredicted RBP12.17□□□□□ -0.46
VMP1-206ENST00000587945 G6PC2Q9NQR9 355 aa12.17□□□□□ -0.46
VMP1-206ENST00000587945 GRHPRQ9UBQ7 328 aa12.17□□□□□ -0.46
VMP1-206ENST00000587945 C12orf71A8MTZ7 269 aa12.16□□□□□ -0.46
VMP1-206ENST00000587945 UBOX5O94941 541 aa12.16□□□□□ -0.46
VMP1-206ENST00000587945 ABHD16AO95870 558 aa12.16□□□□□ -0.46
VMP1-206ENST00000587945 PNPP00491 289 aa12.16□□□□□ -0.46
VMP1-206ENST00000587945 ANPEPP15144 967 aa12.16□□□□□ -0.46
VMP1-206ENST00000587945 CTLA4P16410 223 aa12.16□□□□□ -0.46
VMP1-206ENST00000587945 NUDT2P50583 147 aa12.16□□□□□ -0.46
VMP1-206ENST00000587945 PSG7Q13046 419 aa12.16□□□□□ -0.46
VMP1-206ENST00000587945 ANKDD1AQ495B1 522 aa12.16□□□□□ -0.46
VMP1-206ENST00000587945 ZBED5Q49AG3 693 aa12.16□□□□□ -0.46
VMP1-206ENST00000587945 TMPRSS11FQ6ZWK6 438 aa12.16□□□□□ -0.46
VMP1-206ENST00000587945 FAM122BQ7Z309 247 aa12.16□□□□□ -0.46
VMP1-206ENST00000587945 SLC7A13Q8TCU3 470 aa12.16□□□□□ -0.46
VMP1-206ENST00000587945 RAB1CQ92928 201 aa12.16□□□□□ -0.46
VMP1-206ENST00000587945 RASD2Q96D21 266 aa12.16□□□□□ -0.46
VMP1-206ENST00000587945 RAB39BQ96DA2 213 aa12.16□□□□□ -0.46
VMP1-206ENST00000587945 TIMD4Q96H15 378 aa12.16□□□□□ -0.46
VMP1-206ENST00000587945 ZNF570Q96NI8 536 aa12.16□□□□□ -0.46
VMP1-206ENST00000587945 KCTD14Q9BQ13 255 aaPredicted RBP12.16□□□□□ -0.46
VMP1-206ENST00000587945 RERGLQ9H628 205 aa12.16□□□□□ -0.46
VMP1-206ENST00000587945 EFCAB1Q9HAE3 211 aa12.16□□□□□ -0.46
VMP1-206ENST00000587945 ELOVL3Q9HB03 270 aa12.16□□□□□ -0.46
VMP1-206ENST00000587945 DCAF16Q9NXF7 216 aa12.16□□□□□ -0.46
VMP1-206ENST00000587945 IL20RAQ9UHF4 553 aa12.16□□□□□ -0.46
VMP1-206ENST00000587945 KLHL21Q9UJP4 597 aa12.16□□□□□ -0.46
VMP1-206ENST00000587945 ENPP4Q9Y6X5 453 aa12.16□□□□□ -0.46
VMP1-206ENST00000587945 TEX13CA0A0J9YWL9 993 aa12.15□□□□□ -0.46
VMP1-206ENST00000587945 ISPDA4D126 451 aa12.15□□□□□ -0.46
VMP1-206ENST00000587945 PRSS37A4D1T9 235 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms