RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 SGCDQ92629 289 aa11.17□□□□□ -0.62
VMP1-202ENST00000585847 ZMYND19Q96E35 227 aaPredicted RBP11.17□□□□□ -0.62
VMP1-202ENST00000585847 YIPF6Q96EC8 236 aa11.17□□□□□ -0.62
VMP1-202ENST00000585847 OR2M2Q96R28 347 aa11.17□□□□□ -0.62
VMP1-202ENST00000585847 LINC00470Q9BZP3 86 aa11.17□□□□□ -0.62
VMP1-202ENST00000585847 NIPAL2Q9H841 368 aa11.17□□□□□ -0.62
VMP1-202ENST00000585847 MED20Q9H944 212 aa11.17□□□□□ -0.62
VMP1-202ENST00000585847 BABAM2Q9NXR7 383 aa11.17□□□□□ -0.62
VMP1-202ENST00000585847 GLTPQ9NZD2 209 aa11.17□□□□□ -0.62
VMP1-202ENST00000585847 PTTG2Q9NZH5 202 aa11.17□□□□□ -0.62
VMP1-202ENST00000585847 Q9UFV3 132 aa11.17□□□□□ -0.62
VMP1-202ENST00000585847 FLVCR1Q9Y5Y0 555 aa11.17□□□□□ -0.62
VMP1-202ENST00000585847 CEPT1Q9Y6K0 416 aa11.17□□□□□ -0.62
VMP1-202ENST00000585847 CRYBG3Q68DQ2 2970 aa11.16□□□□□ -0.62
VMP1-202ENST00000585847 A0A1B0GUH1 482 aa11.16□□□□□ -0.62
VMP1-202ENST00000585847 TRIM64BA6NI03 449 aa11.16□□□□□ -0.62
VMP1-202ENST00000585847 GPRIN2O60269 458 aa11.16□□□□□ -0.62
VMP1-202ENST00000585847 ZNF432O94892 652 aa11.16□□□□□ -0.62
VMP1-202ENST00000585847 CNOT4O95628 575 aaKnown RBP11.16□□□□□ -0.62
VMP1-202ENST00000585847 KRT8P05787 483 aa11.16□□□□□ -0.62
VMP1-202ENST00000585847 GAAP10253 952 aa11.16□□□□□ -0.62
VMP1-202ENST00000585847 HLA-DOBP13765 273 aa11.16□□□□□ -0.62
VMP1-202ENST00000585847 CTLA4P16410 223 aa11.16□□□□□ -0.62
VMP1-202ENST00000585847 CPEP16870 476 aa11.16□□□□□ -0.62
VMP1-202ENST00000585847 LAP3P28838 519 aa11.16□□□□□ -0.62
VMP1-202ENST00000585847 GABRA5P31644 462 aa11.16□□□□□ -0.62
VMP1-202ENST00000585847 DCTDP32321 178 aa11.16□□□□□ -0.62
VMP1-202ENST00000585847 MAP2K4P45985 399 aa11.16□□□□□ -0.62
VMP1-202ENST00000585847 TGM4P49221 684 aa11.16□□□□□ -0.62
VMP1-202ENST00000585847 ETV1P50549 477 aa11.16□□□□□ -0.62
VMP1-202ENST00000585847 GBX2P52951 348 aaPredicted RBP11.16□□□□□ -0.62
VMP1-202ENST00000585847 CLDN17P56750 224 aa11.16□□□□□ -0.62
VMP1-202ENST00000585847 ROM1Q03395 351 aa11.16□□□□□ -0.62
VMP1-202ENST00000585847 PIGFQ07326 219 aa11.16□□□□□ -0.62
VMP1-202ENST00000585847 RASGEF1BQ0VAM2 473 aa11.16□□□□□ -0.62
VMP1-202ENST00000585847 MELKQ14680 651 aa11.16□□□□□ -0.62
VMP1-202ENST00000585847 C1QTNF12Q5T7M4 302 aa11.16□□□□□ -0.62
VMP1-202ENST00000585847 LINC00299Q6ZSB3 139 aa11.16□□□□□ -0.62
VMP1-202ENST00000585847 FOXL2NBQ6ZUU3 175 aa11.16□□□□□ -0.62
VMP1-202ENST00000585847 DPPA2Q7Z7J5 298 aa11.16□□□□□ -0.62
VMP1-202ENST00000585847 CDC20BQ86Y33 519 aa11.16□□□□□ -0.62
VMP1-202ENST00000585847 WDFY1Q8IWB7 410 aa11.16□□□□□ -0.62
VMP1-202ENST00000585847 C20orf196Q8IYI0 205 aa11.16□□□□□ -0.62
VMP1-202ENST00000585847 KDM8Q8N371 416 aa11.16□□□□□ -0.62
VMP1-202ENST00000585847 MS4A15Q8N5U1 240 aa11.16□□□□□ -0.62
VMP1-202ENST00000585847 KBTBD8Q8NFY9 601 aa11.16□□□□□ -0.62
VMP1-202ENST00000585847 SLC26A10Q8NG04 563 aa11.16□□□□□ -0.62
VMP1-202ENST00000585847 OR6N1Q8NGY5 312 aa11.16□□□□□ -0.62
VMP1-202ENST00000585847 PHYHIPQ92561 330 aa11.16□□□□□ -0.62
VMP1-202ENST00000585847 TMEM54Q969K7 222 aa11.16□□□□□ -0.62
VMP1-202ENST00000585847 ISOC1Q96CN7 298 aa11.16□□□□□ -0.62
VMP1-202ENST00000585847 ZFP3Q96NJ6 502 aa11.16□□□□□ -0.62
VMP1-202ENST00000585847 PRRG4Q9BZD6 226 aa11.16□□□□□ -0.62
VMP1-202ENST00000585847 KCNN2Q9H2S1 579 aa11.16□□□□□ -0.62
VMP1-202ENST00000585847 MED29Q9NX70 200 aa11.16□□□□□ -0.62
VMP1-202ENST00000585847 LAMP5Q9UJQ1 280 aa11.16□□□□□ -0.62
VMP1-202ENST00000585847 FOXD3Q9UJU5 478 aaPredicted RBP11.16□□□□□ -0.62
VMP1-202ENST00000585847 CLEC4AQ9UMR7 237 aa11.16□□□□□ -0.62
VMP1-202ENST00000585847 CELSR2Q9HCU4 2923 aa11.16□□□□□ -0.62
VMP1-202ENST00000585847 LRBAP50851 2863 aa11.16□□□□□ -0.62
VMP1-202ENST00000585847 TNFSF13O75888 250 aa11.15□□□□□ -0.62
VMP1-202ENST00000585847 CLDN1O95832 211 aa11.15□□□□□ -0.62
VMP1-202ENST00000585847 SERPINA3P01011 423 aa11.15□□□□□ -0.62
VMP1-202ENST00000585847 HLA-DQA2P01906 255 aa11.15□□□□□ -0.62
VMP1-202ENST00000585847 HLA-DPB1P04440 258 aa11.15□□□□□ -0.62
VMP1-202ENST00000585847 LCKP06239 509 aa11.15□□□□□ -0.62
VMP1-202ENST00000585847 CRHP06850 196 aa11.15□□□□□ -0.62
VMP1-202ENST00000585847 CLUP10909 449 aa11.15□□□□□ -0.62
VMP1-202ENST00000585847 CD36P16671 472 aa11.15□□□□□ -0.62
VMP1-202ENST00000585847 EDNRAP25101 427 aa11.15□□□□□ -0.62
VMP1-202ENST00000585847 KIR2DL2P43627 348 aaPredicted RBP11.15□□□□□ -0.62
VMP1-202ENST00000585847 CASP6P55212 293 aa11.15□□□□□ -0.62
VMP1-202ENST00000585847 TUBA1BP68363 451 aa11.15□□□□□ -0.62
VMP1-202ENST00000585847 MRPS34P82930 218 aaKnown RBP11.15□□□□□ -0.62
VMP1-202ENST00000585847 TMEM211Q6ICI0 200 aa11.15□□□□□ -0.62
VMP1-202ENST00000585847 PAMR1Q6UXH9 720 aa11.15□□□□□ -0.62
VMP1-202ENST00000585847 TUBA1AQ71U36 451 aa11.15□□□□□ -0.62
VMP1-202ENST00000585847 AAED1Q7RTV5 226 aa11.15□□□□□ -0.62
VMP1-202ENST00000585847 ERI1Q8IV48 349 aaKnown RBP11.15□□□□□ -0.62
VMP1-202ENST00000585847 GCNT2Q8N0V5 402 aa11.15□□□□□ -0.62
VMP1-202ENST00000585847 ZIC4Q8N9L1 334 aa11.15□□□□□ -0.62
VMP1-202ENST00000585847 GMPPAQ96IJ6 420 aaPredicted RBP11.15□□□□□ -0.62
VMP1-202ENST00000585847 OPALINQ96PE5 141 aa11.15□□□□□ -0.62
VMP1-202ENST00000585847 ZNF649Q9BS31 505 aa11.15□□□□□ -0.62
VMP1-202ENST00000585847 FUNDC2Q9BWH2 189 aa11.15□□□□□ -0.62
VMP1-202ENST00000585847 ULBP2Q9BZM5 246 aa11.15□□□□□ -0.62
VMP1-202ENST00000585847 SRA1Q9HD15 236 aaKnown RBP11.15□□□□□ -0.62
VMP1-202ENST00000585847 CACNA1DQ01668 2161 aa11.14□□□□□ -0.63
VMP1-202ENST00000585847 A0A1W2PQL4 384 aaPredicted RBP11.14□□□□□ -0.63
VMP1-202ENST00000585847 WIPF3A6NGB9 483 aa11.14□□□□□ -0.63
VMP1-202ENST00000585847 SS18L1O75177 396 aaPredicted RBP11.14□□□□□ -0.63
VMP1-202ENST00000585847 MRPL33O75394 65 aaKnown RBP11.14□□□□□ -0.63
VMP1-202ENST00000585847 CGAP01215 116 aa11.14□□□□□ -0.63
VMP1-202ENST00000585847 APOC1P02654 83 aa11.14□□□□□ -0.63
VMP1-202ENST00000585847 GYPBP06028 91 aa11.14□□□□□ -0.63
VMP1-202ENST00000585847 YES1P07947 543 aa11.14□□□□□ -0.63
VMP1-202ENST00000585847 HSMCR30P0CW71 290 aa11.14□□□□□ -0.63
VMP1-202ENST00000585847 TMIGD3P0DMS9 266 aaPredicted RBP11.14□□□□□ -0.63
VMP1-202ENST00000585847 ALOX5APP20292 161 aa11.14□□□□□ -0.63
VMP1-202ENST00000585847 ADAM8P78325 824 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms