RNA–Protein interactions for RNA: ENST00000581265.1

RFFL-209, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-209ENST00000581265 DVL3Q92997 716 aaPredicted RBP8.97□□□□□ -0.97
RFFL-209ENST00000581265 LRRC58Q96CX6 371 aa8.97□□□□□ -0.97
RFFL-209ENST00000581265 THOC1Q96FV9 657 aaKnown RBP8.97□□□□□ -0.97
RFFL-209ENST00000581265 MAGEB18Q96M61 343 aa8.97□□□□□ -0.97
RFFL-209ENST00000581265 SLC6A7Q99884 636 aa8.97□□□□□ -0.97
RFFL-209ENST00000581265 ECSITQ9BQ95 431 aa8.97□□□□□ -0.97
RFFL-209ENST00000581265 SIKE1Q9BRV8 207 aa8.97□□□□□ -0.97
RFFL-209ENST00000581265 ALG12Q9BV10 488 aa8.97□□□□□ -0.97
RFFL-209ENST00000581265 WNT5BQ9H1J7 359 aa8.97□□□□□ -0.97
RFFL-209ENST00000581265 ELOVL3Q9HB03 270 aa8.97□□□□□ -0.97
RFFL-209ENST00000581265 NTN4Q9HB63 628 aa8.97□□□□□ -0.97
RFFL-209ENST00000581265 ESM1Q9NQ30 184 aa8.97□□□□□ -0.97
RFFL-209ENST00000581265 POLR3KQ9Y2Y1 108 aaPredicted RBP8.97□□□□□ -0.97
RFFL-209ENST00000581265 FXYD1O00168 92 aa8.96□□□□□ -0.98
RFFL-209ENST00000581265 TMPRSS2O15393 492 aa8.96□□□□□ -0.98
RFFL-209ENST00000581265 SHOX2O60902 331 aaPredicted RBP8.96□□□□□ -0.98
RFFL-209ENST00000581265 FOXH1O75593 365 aa8.96□□□□□ -0.98
RFFL-209ENST00000581265 PRSS23O95084 383 aa8.96□□□□□ -0.98
RFFL-209ENST00000581265 IGHMP01871 453 aa8.96□□□□□ -0.98
RFFL-209ENST00000581265 TUBG1P23258 451 aa8.96□□□□□ -0.98
RFFL-209ENST00000581265 ZFP36P26651 326 aaKnown RBP8.96□□□□□ -0.98
RFFL-209ENST00000581265 GUCA1AP43080 201 aaPredicted RBP8.96□□□□□ -0.98
RFFL-209ENST00000581265 OR1E2P47887 323 aa8.96□□□□□ -0.98
RFFL-209ENST00000581265 RPL27P61353 136 aaKnown RBP8.96□□□□□ -0.98
RFFL-209ENST00000581265 LCN2P80188 198 aa8.96□□□□□ -0.98
RFFL-209ENST00000581265 ST3GAL3Q11203 375 aa8.96□□□□□ -0.98
RFFL-209ENST00000581265 CDK5R2Q13319 367 aa8.96□□□□□ -0.98
RFFL-209ENST00000581265 ANKDD1AQ495B1 522 aa8.96□□□□□ -0.98
RFFL-209ENST00000581265 AWAT1Q58HT5 328 aa8.96□□□□□ -0.98
RFFL-209ENST00000581265 SPRNQ5BIV9 151 aa8.96□□□□□ -0.98
RFFL-209ENST00000581265 ZMAT1Q5H9K5 638 aa8.96□□□□□ -0.98
RFFL-209ENST00000581265 MTX3Q5HYI7 312 aa8.96□□□□□ -0.98
RFFL-209ENST00000581265 COQ5Q5HYK3 327 aa8.96□□□□□ -0.98
RFFL-209ENST00000581265 FAM205BPQ63HN1 556 aa8.96□□□□□ -0.98
RFFL-209ENST00000581265 ERICH5Q6P6B1 374 aa8.96□□□□□ -0.98
RFFL-209ENST00000581265 ARL9Q6T311 187 aa8.96□□□□□ -0.98
RFFL-209ENST00000581265 SHISA2Q6UWI4 295 aa8.96□□□□□ -0.98
RFFL-209ENST00000581265 TREML4Q6UXN2 200 aa8.96□□□□□ -0.98
RFFL-209ENST00000581265 RFPL4BQ6ZWI9 263 aa8.96□□□□□ -0.98
RFFL-209ENST00000581265 ZER1Q7Z7L7 766 aa8.96□□□□□ -0.98
RFFL-209ENST00000581265 SYT9Q86SS6 491 aa8.96□□□□□ -0.98
RFFL-209ENST00000581265 LRRC75AQ8NAA5 344 aa8.96□□□□□ -0.98
RFFL-209ENST00000581265 ABHD4Q8TB40 342 aa8.96□□□□□ -0.98
RFFL-209ENST00000581265 ST7LQ8TDW4 575 aa8.96□□□□□ -0.98
RFFL-209ENST00000581265 BPIFA2Q96DR5 249 aa8.96□□□□□ -0.98
RFFL-209ENST00000581265 C4orf45Q96LM5 186 aa8.96□□□□□ -0.98
RFFL-209ENST00000581265 ZNF583Q96ND8 569 aa8.96□□□□□ -0.98
RFFL-209ENST00000581265 WACQ9BTA9 647 aa8.96□□□□□ -0.98
RFFL-209ENST00000581265 MSL2Q9HCI7 577 aa8.96□□□□□ -0.98
RFFL-209ENST00000581265 TUBG2Q9NRH3 451 aa8.96□□□□□ -0.98
RFFL-209ENST00000581265 DDX28Q9NUL7 540 aaKnown RBP8.96□□□□□ -0.98
RFFL-209ENST00000581265 TBCCD1Q9NVR7 557 aa8.96□□□□□ -0.98
RFFL-209ENST00000581265 UBAP1Q9NZ09 502 aa8.96□□□□□ -0.98
RFFL-209ENST00000581265 PCDHGB1Q9Y5G3 927 aa8.96□□□□□ -0.98
RFFL-209ENST00000581265 NPTNQ9Y639 398 aa8.96□□□□□ -0.98
RFFL-209ENST00000581265 A0A0G2JND7 137 aa8.95□□□□□ -0.98
RFFL-209ENST00000581265 ISPDA4D126 451 aa8.95□□□□□ -0.98
RFFL-209ENST00000581265 C12orf71A8MTZ7 269 aa8.95□□□□□ -0.98
RFFL-209ENST00000581265 EDF1O60869 148 aaKnown RBP8.95□□□□□ -0.98
RFFL-209ENST00000581265 SBK2P0C263 348 aa8.95□□□□□ -0.98
RFFL-209ENST00000581265 COX5BP10606 129 aa8.95□□□□□ -0.98
RFFL-209ENST00000581265 KDELR2P33947 212 aa8.95□□□□□ -0.98
RFFL-209ENST00000581265 ARHGDIAP52565 204 aa8.95□□□□□ -0.98
RFFL-209ENST00000581265 CTXN1P60606 82 aa8.95□□□□□ -0.98
RFFL-209ENST00000581265 UBA52P62987 128 aaKnown RBP8.95□□□□□ -0.98
RFFL-209ENST00000581265 SELENOWP63302 87 aa8.95□□□□□ -0.98
RFFL-209ENST00000581265 PSG7Q13046 419 aa8.95□□□□□ -0.98
RFFL-209ENST00000581265 TOP3AQ13472 1001 aaPredicted RBP8.95□□□□□ -0.98
RFFL-209ENST00000581265 FHL1Q13642 323 aa8.95□□□□□ -0.98
RFFL-209ENST00000581265 ENDOGQ14249 297 aaKnown RBP8.95□□□□□ -0.98
RFFL-209ENST00000581265 CYBRD1Q53TN4 286 aa8.95□□□□□ -0.98
RFFL-209ENST00000581265 ZNF774Q6NX45 483 aa8.95□□□□□ -0.98
RFFL-209ENST00000581265 LRRC28Q86X40 367 aaPredicted RBP8.95□□□□□ -0.98
RFFL-209ENST00000581265 CLDN22Q8N7P3 220 aa8.95□□□□□ -0.98
RFFL-209ENST00000581265 DEFB108BQ8NET1 73 aa8.95□□□□□ -0.98
RFFL-209ENST00000581265 C10orf82Q8WW14 230 aa8.95□□□□□ -0.98
RFFL-209ENST00000581265 GEMIN6Q8WXD5 167 aaKnown RBP8.95□□□□□ -0.98
RFFL-209ENST00000581265 C22orf15Q8WYQ4 148 aa8.95□□□□□ -0.98
RFFL-209ENST00000581265 POP5Q969H6 163 aaKnown RBP8.95□□□□□ -0.98
RFFL-209ENST00000581265 SAMD8Q96LT4 415 aa8.95□□□□□ -0.98
RFFL-209ENST00000581265 ZNF747Q9BV97 191 aa8.95□□□□□ -0.98
RFFL-209ENST00000581265 NPHS2Q9NP85 383 aa8.95□□□□□ -0.98
RFFL-209ENST00000581265 MMP26Q9NRE1 261 aa8.95□□□□□ -0.98
RFFL-209ENST00000581265 MRGBPQ9NV56 204 aa8.95□□□□□ -0.98
RFFL-209ENST00000581265 PURGQ9UJV8 347 aaKnown RBP8.95□□□□□ -0.98
RFFL-209ENST00000581265 NDRG4Q9ULP0 352 aaKnown RBP8.95□□□□□ -0.98
RFFL-209ENST00000581265 A4GNTQ9UNA3 340 aa8.95□□□□□ -0.98
RFFL-209ENST00000581265 A6NIZ1 184 aa8.94□□□□□ -0.98
RFFL-209ENST00000581265 HMGB1P1B2RPK0 211 aaPredicted RBP8.94□□□□□ -0.98
RFFL-209ENST00000581265 TRAPPC2LH3BP13 241 aa8.94□□□□□ -0.98
RFFL-209ENST00000581265 PIP5K1CO60331 668 aa8.94□□□□□ -0.98
RFFL-209ENST00000581265 IGHV2-70P01814 119 aa8.94□□□□□ -0.98
RFFL-209ENST00000581265 HKR1P10072 659 aa8.94□□□□□ -0.98
RFFL-209ENST00000581265 IFI30P13284 250 aa8.94□□□□□ -0.98
RFFL-209ENST00000581265 TNFRSF1AP19438 455 aa8.94□□□□□ -0.98
RFFL-209ENST00000581265 MSR1P21757 451 aa8.94□□□□□ -0.98
RFFL-209ENST00000581265 IFNA8P32881 189 aa8.94□□□□□ -0.98
RFFL-209ENST00000581265 SLC6A9P48067 706 aa8.94□□□□□ -0.98
RFFL-209ENST00000581265 RAP1BP61224 184 aa8.94□□□□□ -0.98
RFFL-209ENST00000581265 RAP1AP62834 184 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms