RNA–Protein interactions for RNA: ENST00000578700.5

SS18-210, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-210ENST00000578700 TPBGQ13641 420 aa9.01□□□□□ -0.97
SS18-210ENST00000578700 TRAM1Q15629 374 aa9.01□□□□□ -0.97
SS18-210ENST00000578700 OR2G6Q5TZ20 316 aa9.01□□□□□ -0.97
SS18-210ENST00000578700 LIPKQ5VXJ0 399 aa9.01□□□□□ -0.97
SS18-210ENST00000578700 SHEQ5VZ18 495 aa9.01□□□□□ -0.97
SS18-210ENST00000578700 PAQR6Q6TCH4 344 aa9.01□□□□□ -0.97
SS18-210ENST00000578700 ZNF322Q6U7Q0 402 aaPredicted RBP9.01□□□□□ -0.97
SS18-210ENST00000578700 B3GLCTQ6Y288 498 aa9.01□□□□□ -0.97
SS18-210ENST00000578700 PLEKHG7Q6ZR37 379 aa9.01□□□□□ -0.97
SS18-210ENST00000578700 TMPPEQ6ZT21 453 aa9.01□□□□□ -0.97
SS18-210ENST00000578700 SLC35D2Q76EJ3 337 aa9.01□□□□□ -0.97
SS18-210ENST00000578700 SLC16A9Q7RTY1 509 aa9.01□□□□□ -0.97
SS18-210ENST00000578700 FAM220AQ7Z4H9 259 aa9.01□□□□□ -0.97
SS18-210ENST00000578700 EGFL6Q8IUX8 553 aa9.01□□□□□ -0.97
SS18-210ENST00000578700 SYS1Q8N2H4 156 aa9.01□□□□□ -0.97
SS18-210ENST00000578700 CIARTQ8N365 385 aaPredicted RBP9.01□□□□□ -0.97
SS18-210ENST00000578700 TMEM99Q8N816 258 aa9.01□□□□□ -0.97
SS18-210ENST00000578700 OR51L1Q8NGJ5 315 aa9.01□□□□□ -0.97
SS18-210ENST00000578700 OR5M1Q8NGP8 315 aa9.01□□□□□ -0.97
SS18-210ENST00000578700 FNDC8Q8TC99 324 aa9.01□□□□□ -0.97
SS18-210ENST00000578700 SPRYD4Q8WW59 207 aaPredicted RBP9.01□□□□□ -0.97
SS18-210ENST00000578700 KISS1RQ969F8 398 aaPredicted RBP9.01□□□□□ -0.97
SS18-210ENST00000578700 SFXN2Q96NB2 322 aa9.01□□□□□ -0.97
SS18-210ENST00000578700 RBP7Q96R05 134 aa9.01□□□□□ -0.97
SS18-210ENST00000578700 COQ7Q99807 217 aa9.01□□□□□ -0.97
SS18-210ENST00000578700 SYT4Q9H2B2 425 aa9.01□□□□□ -0.97
SS18-210ENST00000578700 PLEKHF2Q9H8W4 249 aa9.01□□□□□ -0.97
SS18-210ENST00000578700 RASD1Q9Y272 281 aa9.01□□□□□ -0.97
SS18-210ENST00000578700 GSTK1Q9Y2Q3 226 aa9.01□□□□□ -0.97
SS18-210ENST00000578700 FKBP7Q9Y680 259 aa9.01□□□□□ -0.97
SS18-210ENST00000578700 ANK3Q12955 4377 aaKnown RBP9.01□□□□□ -0.97
SS18-210ENST00000578700 ZNF726A6NNF4 738 aa9□□□□□ -0.97
SS18-210ENST00000578700 AHRRA9YTQ3 701 aa9□□□□□ -0.97
SS18-210ENST00000578700 H7C1C5 153 aa9□□□□□ -0.97
SS18-210ENST00000578700 H7C1Q1 480 aa9□□□□□ -0.97
SS18-210ENST00000578700 J3QLW9 94 aa9□□□□□ -0.97
SS18-210ENST00000578700 J3QRE1 110 aa9□□□□□ -0.97
SS18-210ENST00000578700 SLC16A7O60669 478 aa9□□□□□ -0.97
SS18-210ENST00000578700 HLA-DPB1P04440 258 aa9□□□□□ -0.97
SS18-210ENST00000578700 IFNGR1P15260 489 aa9□□□□□ -0.97
SS18-210ENST00000578700 ZNF19P17023 458 aa9□□□□□ -0.97
SS18-210ENST00000578700 ZNF182P17025 639 aaPredicted RBP9□□□□□ -0.97
SS18-210ENST00000578700 ZNF43P17038 809 aa9□□□□□ -0.97
SS18-210ENST00000578700 CD53P19397 219 aa9□□□□□ -0.97
SS18-210ENST00000578700 IL11P20809 199 aa9□□□□□ -0.97
SS18-210ENST00000578700 PAX7P23759 505 aa9□□□□□ -0.97
SS18-210ENST00000578700 GABRA5P31644 462 aa9□□□□□ -0.97
SS18-210ENST00000578700 UGT2B10P36537 528 aa9□□□□□ -0.97
SS18-210ENST00000578700 NAA10P41227 235 aaPredicted RBP9□□□□□ -0.97
SS18-210ENST00000578700 CLRN1P58418 232 aa9□□□□□ -0.97
SS18-210ENST00000578700 LCN6P62502 163 aa9□□□□□ -0.97
SS18-210ENST00000578700 GLO1Q04760 184 aa9□□□□□ -0.97
SS18-210ENST00000578700 MRPL28Q13084 256 aaKnown RBP9□□□□□ -0.97
SS18-210ENST00000578700 SPCS2Q15005 226 aa9□□□□□ -0.97
SS18-210ENST00000578700 HYAL4Q2M3T9 481 aa9□□□□□ -0.97
SS18-210ENST00000578700 EEF1A1P5Q5VTE0 462 aa9□□□□□ -0.97
SS18-210ENST00000578700 KCTD20Q7Z5Y7 419 aa9□□□□□ -0.97
SS18-210ENST00000578700 GPAT4Q86UL3 456 aa9□□□□□ -0.97
SS18-210ENST00000578700 KLBQ86Z14 1044 aa9□□□□□ -0.97
SS18-210ENST00000578700 PHC2Q8IXK0 858 aa9□□□□□ -0.97
SS18-210ENST00000578700 PM20D2Q8IYS1 436 aa9□□□□□ -0.97
SS18-210ENST00000578700 NEIL3Q8TAT5 605 aa9□□□□□ -0.97
SS18-210ENST00000578700 ZNF519Q8TB69 540 aa9□□□□□ -0.97
SS18-210ENST00000578700 NTNG2Q96CW9 530 aa9□□□□□ -0.97
SS18-210ENST00000578700 ADAD1Q96M93 576 aaKnown RBP9□□□□□ -0.97
SS18-210ENST00000578700 KLHL15Q96M94 604 aa9□□□□□ -0.97
SS18-210ENST00000578700 OXGR1Q96P68 337 aa9□□□□□ -0.97
SS18-210ENST00000578700 TRIB1Q96RU8 372 aa9□□□□□ -0.97
SS18-210ENST00000578700 INTS14Q96SY0 518 aa9□□□□□ -0.97
SS18-210ENST00000578700 DDOQ99489 341 aa9□□□□□ -0.97
SS18-210ENST00000578700 NPAS1Q99742 590 aa9□□□□□ -0.97
SS18-210ENST00000578700 DCSTAMPQ9H295 470 aa9□□□□□ -0.97
SS18-210ENST00000578700 PROK2Q9HC23 129 aa9□□□□□ -0.97
SS18-210ENST00000578700 FANCFQ9NPI8 374 aa9□□□□□ -0.97
SS18-210ENST00000578700 BEX4Q9NWD9 120 aaPredicted RBP9□□□□□ -0.97
SS18-210ENST00000578700 VSX1Q9NZR4 365 aaPredicted RBP9□□□□□ -0.97
SS18-210ENST00000578700 ZNF629Q9UEG4 869 aaPredicted RBP9□□□□□ -0.97
SS18-210ENST00000578700 LAMP5Q9UJQ1 280 aa9□□□□□ -0.97
SS18-210ENST00000578700 FOXD3Q9UJU5 478 aaPredicted RBP9□□□□□ -0.97
SS18-210ENST00000578700 CAMK2AQ9UQM7 478 aa9□□□□□ -0.97
SS18-210ENST00000578700 HIVEP2P31629 2446 aa9□□□□□ -0.97
SS18-210ENST00000578700 DOCK7Q96N67 2140 aa8.99□□□□□ -0.97
SS18-210ENST00000578700 LOC102725191A0A1B0GVB3 256 aa8.99□□□□□ -0.97
SS18-210ENST00000578700 A0A1W2PNR3 127 aa8.99□□□□□ -0.97
SS18-210ENST00000578700 A0A1W2PQL4 384 aaPredicted RBP8.99□□□□□ -0.97
SS18-210ENST00000578700 SLC22A23A1A5C7 686 aa8.99□□□□□ -0.97
SS18-210ENST00000578700 AQP7P3A6NL99 342 aa8.99□□□□□ -0.97
SS18-210ENST00000578700 B4DXG7 233 aa8.99□□□□□ -0.97
SS18-210ENST00000578700 INAFM1C9JVW0 142 aa8.99□□□□□ -0.97
SS18-210ENST00000578700 MS4A18H0YCH9 400 aa8.99□□□□□ -0.97
SS18-210ENST00000578700 CASKO14936 926 aa8.99□□□□□ -0.97
SS18-210ENST00000578700 EFNA2O43921 213 aa8.99□□□□□ -0.97
SS18-210ENST00000578700 ZIC3O60481 467 aa8.99□□□□□ -0.97
SS18-210ENST00000578700 TMCC2O75069 709 aa8.99□□□□□ -0.97
SS18-210ENST00000578700 SERPINA3P01011 423 aa8.99□□□□□ -0.97
SS18-210ENST00000578700 IGHG1P01857 330 aa8.99□□□□□ -0.97
SS18-210ENST00000578700 OPN1LWP04000 364 aa8.99□□□□□ -0.97
SS18-210ENST00000578700 KRT8P05787 483 aa8.99□□□□□ -0.97
SS18-210ENST00000578700 ADRA2AP08913 450 aa8.99□□□□□ -0.97
SS18-210ENST00000578700 ZNF823P16415 610 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 94.2 ms