RNA–Protein interactions for RNA: ENST00000577901.5

VAPA-204, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 917 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-204ENST00000577901 FXYD6P3P58550 94 aa13.8□□□□□ -0.2
VAPA-204ENST00000577901 KRR1Q13601 381 aaKnown RBP13.8□□□□□ -0.2
VAPA-204ENST00000577901 GK3PQ14409 553 aa13.8□□□□□ -0.2
VAPA-204ENST00000577901 RAB39AQ14964 217 aa13.8□□□□□ -0.2
VAPA-204ENST00000577901 ADIPOQQ15848 244 aa13.8□□□□□ -0.2
VAPA-204ENST00000577901 MESTQ5EB52 335 aa13.8□□□□□ -0.2
VAPA-204ENST00000577901 PGBD2Q6P3X8 592 aa13.8□□□□□ -0.2
VAPA-204ENST00000577901 VHLLQ6RSH7 139 aa13.8□□□□□ -0.2
VAPA-204ENST00000577901 THSD4Q6ZMP0 1018 aa13.8□□□□□ -0.2
VAPA-204ENST00000577901 ADCK1Q86TW2 530 aa13.8□□□□□ -0.2
VAPA-204ENST00000577901 MYPOPQ86VE0 399 aaPredicted RBP13.8□□□□□ -0.2
VAPA-204ENST00000577901 ADGRG5Q8IZF4 528 aa13.8□□□□□ -0.2
VAPA-204ENST00000577901 OR4C15Q8NGM1 316 aa13.8□□□□□ -0.2
VAPA-204ENST00000577901 FGFBP3Q8TAT2 258 aa13.8□□□□□ -0.2
VAPA-204ENST00000577901 ZNF75AQ96N20 296 aa13.8□□□□□ -0.2
VAPA-204ENST00000577901 BPESC1Q9GZL8 116 aa13.8□□□□□ -0.2
VAPA-204ENST00000577901 OR52D1Q9H346 318 aa13.8□□□□□ -0.2
VAPA-204ENST00000577901 C1orf198Q9H425 327 aa13.8□□□□□ -0.2
VAPA-204ENST00000577901 HEATR1Q9H583 2144 aaKnown RBP13.8□□□□□ -0.2
VAPA-204ENST00000577901 CCNB1IP1Q9NPC3 277 aa13.8□□□□□ -0.2
VAPA-204ENST00000577901 POMPQ9Y244 141 aa13.8□□□□□ -0.2
VAPA-204ENST00000577901 IGKV1D-43A0A0B4J1Z2 117 aa13.79□□□□□ -0.2
VAPA-204ENST00000577901 IQCMA0A1B0GVH7 501 aa13.79□□□□□ -0.2
VAPA-204ENST00000577901 A0A1W2PPL8 197 aa13.79□□□□□ -0.2
VAPA-204ENST00000577901 H7C1C5 153 aa13.79□□□□□ -0.2
VAPA-204ENST00000577901 GNGT2O14610 69 aa13.79□□□□□ -0.2
VAPA-204ENST00000577901 IMPA2O14732 288 aa13.79□□□□□ -0.2
VAPA-204ENST00000577901 TXNDC12O95881 172 aa13.79□□□□□ -0.2
VAPA-204ENST00000577901 CST1P01037 141 aa13.79□□□□□ -0.2
VAPA-204ENST00000577901 LCN6P62502 163 aa13.79□□□□□ -0.2
VAPA-204ENST00000577901 GALK2Q01415 458 aa13.79□□□□□ -0.2
VAPA-204ENST00000577901 HGFACQ04756 655 aa13.79□□□□□ -0.2
VAPA-204ENST00000577901 EFNB3Q15768 340 aa13.79□□□□□ -0.2
VAPA-204ENST00000577901 MICAQ29983 383 aa13.79□□□□□ -0.2
VAPA-204ENST00000577901 FAM27BQ5VT28 67 aa13.79□□□□□ -0.2
VAPA-204ENST00000577901 LIPNQ5VXI9 398 aa13.79□□□□□ -0.2
VAPA-204ENST00000577901 RPL13AP3Q6NVV1 102 aa13.79□□□□□ -0.2
VAPA-204ENST00000577901 CANT1Q8WVQ1 401 aa13.79□□□□□ -0.2
VAPA-204ENST00000577901 RASD2Q96D21 266 aa13.79□□□□□ -0.2
VAPA-204ENST00000577901 ERMAPQ96PL5 475 aaPredicted RBP13.79□□□□□ -0.2
VAPA-204ENST00000577901 IFT27Q9BW83 186 aa13.79□□□□□ -0.2
VAPA-204ENST00000577901 CADM1Q9BY67 442 aaKnown RBP13.79□□□□□ -0.2
VAPA-204ENST00000577901 LRMDAQ9H2I8 198 aa13.79□□□□□ -0.2
VAPA-204ENST00000577901 MMADHCQ9H3L0 296 aaPredicted RBP13.79□□□□□ -0.2
VAPA-204ENST00000577901 PLK3Q9H4B4 646 aa13.79□□□□□ -0.2
VAPA-204ENST00000577901 YY1AP1Q9H869 796 aa13.79□□□□□ -0.2
VAPA-204ENST00000577901 U3KQV3 271 aa13.79□□□□□ -0.2
VAPA-204ENST00000577901 SOCS2O14508 198 aa13.78□□□□□ -0.2
VAPA-204ENST00000577901 ARPC3O15145 178 aa13.78□□□□□ -0.2
VAPA-204ENST00000577901 PPP1R3DO95685 299 aa13.78□□□□□ -0.2
VAPA-204ENST00000577901 GASTP01350 101 aa13.78□□□□□ -0.2
VAPA-204ENST00000577901 ZNF35P13682 527 aa13.78□□□□□ -0.2
VAPA-204ENST00000577901 NOS3P29474 1203 aa13.78□□□□□ -0.2
VAPA-204ENST00000577901 PPOXP50336 477 aa13.78□□□□□ -0.2
VAPA-204ENST00000577901 PCBD1P61457 104 aa13.78□□□□□ -0.2
VAPA-204ENST00000577901 HSF2Q03933 536 aa13.78□□□□□ -0.2
VAPA-204ENST00000577901 PPP1R8Q12972 351 aaKnown RBP13.78□□□□□ -0.2
VAPA-204ENST00000577901 DAG1Q14118 895 aa13.78□□□□□ -0.2
VAPA-204ENST00000577901 CR1LQ2VPA4 569 aa13.78□□□□□ -0.2
VAPA-204ENST00000577901 FOXL2NBQ6ZUU3 175 aa13.78□□□□□ -0.2
VAPA-204ENST00000577901 AQP11Q8NBQ7 271 aa13.78□□□□□ -0.2
VAPA-204ENST00000577901 SLC30A7Q8NEW0 376 aa13.78□□□□□ -0.2
VAPA-204ENST00000577901 OR9Q2Q8NGE9 314 aa13.78□□□□□ -0.2
VAPA-204ENST00000577901 OR52L1Q8NGH7 329 aa13.78□□□□□ -0.2
VAPA-204ENST00000577901 OR1J2Q8NGS2 313 aa13.78□□□□□ -0.2
VAPA-204ENST00000577901 NABP1Q96AH0 204 aa13.78□□□□□ -0.2
VAPA-204ENST00000577901 SAMD8Q96LT4 415 aa13.78□□□□□ -0.2
VAPA-204ENST00000577901 SOX7Q9BT81 388 aa13.78□□□□□ -0.2
VAPA-204ENST00000577901 RAB1BQ9H0U4 201 aa13.78□□□□□ -0.2
VAPA-204ENST00000577901 ZNF442Q9H7R0 627 aa13.78□□□□□ -0.2
VAPA-204ENST00000577901 SLC7A8Q9UHI5 535 aa13.78□□□□□ -0.2
VAPA-204ENST00000577901 LRP5LA4QPB2 252 aa13.77□□□□□ -0.21
VAPA-204ENST00000577901 C12orf71A8MTZ7 269 aa13.77□□□□□ -0.21
VAPA-204ENST00000577901 IDH3BO43837 385 aa13.77□□□□□ -0.21
VAPA-204ENST00000577901 SLC16A7O60669 478 aa13.77□□□□□ -0.21
VAPA-204ENST00000577901 KHDRBS3O75525 346 aaKnown RBP13.77□□□□□ -0.21
VAPA-204ENST00000577901 CST2P09228 141 aa13.77□□□□□ -0.21
VAPA-204ENST00000577901 MMP7P09237 267 aaPredicted RBP13.77□□□□□ -0.21
VAPA-204ENST00000577901 GSTM3P21266 225 aa13.77□□□□□ -0.21
VAPA-204ENST00000577901 MSR1P21757 451 aa13.77□□□□□ -0.21
VAPA-204ENST00000577901 NR4A1P22736 598 aa13.77□□□□□ -0.21
VAPA-204ENST00000577901 LAP3P28838 519 aa13.77□□□□□ -0.21
VAPA-204ENST00000577901 THBS4P35443 961 aa13.77□□□□□ -0.21
VAPA-204ENST00000577901 SNTB2Q13425 540 aaKnown RBP13.77□□□□□ -0.21
VAPA-204ENST00000577901 TBC1D28Q2M2D7 210 aa13.77□□□□□ -0.21
VAPA-204ENST00000577901 ZNF770Q6IQ21 691 aaPredicted RBP13.77□□□□□ -0.21
VAPA-204ENST00000577901 KRT80Q6KB66 452 aa13.77□□□□□ -0.21
VAPA-204ENST00000577901 DNM1P34Q6PK57 102 aa13.77□□□□□ -0.21
VAPA-204ENST00000577901 ZNF620Q6ZNG0 422 aa13.77□□□□□ -0.21
VAPA-204ENST00000577901 JAZF1Q86VZ6 243 aa13.77□□□□□ -0.21
VAPA-204ENST00000577901 ZNF584Q8IVC4 421 aa13.77□□□□□ -0.21
VAPA-204ENST00000577901 ALDH16A1Q8IZ83 802 aa13.77□□□□□ -0.21
VAPA-204ENST00000577901 WACQ9BTA9 647 aa13.77□□□□□ -0.21
VAPA-204ENST00000577901 SYT4Q9H2B2 425 aa13.77□□□□□ -0.21
VAPA-204ENST00000577901 RERGLQ9H628 205 aa13.77□□□□□ -0.21
VAPA-204ENST00000577901 VSX1Q9NZR4 365 aaPredicted RBP13.77□□□□□ -0.21
VAPA-204ENST00000577901 FBXO9Q9UK97 447 aaPredicted RBP13.77□□□□□ -0.21
VAPA-204ENST00000577901 TIMM10BQ9Y5J6 103 aa13.77□□□□□ -0.21
VAPA-204ENST00000577901 ARFGEF3Q5TH69 2177 aa13.76□□□□□ -0.21
VAPA-204ENST00000577901 MALRD1Q5VYJ5 2156 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms