RNA–Protein interactions for RNA: ENST00000574776.5

CTNS-209, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 4

Gene CTNS, Length 565 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-209ENST00000574776 C7orf69Q9H7B7 122 aa12.9□□□□□ -0.34
CTNS-209ENST00000574776 MSL2Q9HCI7 577 aa12.9□□□□□ -0.34
CTNS-209ENST00000574776 SAR1AQ9NR31 198 aa12.9□□□□□ -0.34
CTNS-209ENST00000574776 CYSLTR2Q9NS75 346 aa12.9□□□□□ -0.34
CTNS-209ENST00000574776 GID8Q9NWU2 228 aa12.9□□□□□ -0.34
CTNS-209ENST00000574776 UBAP1Q9NZ09 502 aa12.9□□□□□ -0.34
CTNS-209ENST00000574776 SNX13Q9Y5W8 968 aa12.9□□□□□ -0.34
CTNS-209ENST00000574776 TRAV27A0A087WT01 109 aa12.89□□□□□ -0.35
CTNS-209ENST00000574776 ISPDA4D126 451 aa12.89□□□□□ -0.35
CTNS-209ENST00000574776 HTR3EA5X5Y0 456 aa12.89□□□□□ -0.35
CTNS-209ENST00000574776 BBIP1A8MTZ0 92 aa12.89□□□□□ -0.35
CTNS-209ENST00000574776 FAM220BPB1ANY3 271 aa12.89□□□□□ -0.35
CTNS-209ENST00000574776 TRIM77I1YAP6 450 aa12.89□□□□□ -0.35
CTNS-209ENST00000574776 J3QLI3 93 aa12.89□□□□□ -0.35
CTNS-209ENST00000574776 IGHMP01871 453 aa12.89□□□□□ -0.35
CTNS-209ENST00000574776 SCG5P05408 212 aa12.89□□□□□ -0.35
CTNS-209ENST00000574776 IFNA8P32881 189 aa12.89□□□□□ -0.35
CTNS-209ENST00000574776 RBMXP38159 391 aaKnown RBP12.89□□□□□ -0.35
CTNS-209ENST00000574776 LIPAP38571 399 aa12.89□□□□□ -0.35
CTNS-209ENST00000574776 LCN2P80188 198 aa12.89□□□□□ -0.35
CTNS-209ENST00000574776 FHL1Q13642 323 aa12.89□□□□□ -0.35
CTNS-209ENST00000574776 ENDOGQ14249 297 aaKnown RBP12.89□□□□□ -0.35
CTNS-209ENST00000574776 NRMQ8IXM6 262 aa12.89□□□□□ -0.35
CTNS-209ENST00000574776 C1orf174Q8IYL3 243 aa12.89□□□□□ -0.35
CTNS-209ENST00000574776 PCYOX1LQ8NBM8 494 aa12.89□□□□□ -0.35
CTNS-209ENST00000574776 OR2T12Q8NG77 320 aa12.89□□□□□ -0.35
CTNS-209ENST00000574776 NANPQ8TBE9 248 aa12.89□□□□□ -0.35
CTNS-209ENST00000574776 FNDC8Q8TC99 324 aa12.89□□□□□ -0.35
CTNS-209ENST00000574776 FAM216AQ8WUB2 273 aa12.89□□□□□ -0.35
CTNS-209ENST00000574776 GEMIN6Q8WXD5 167 aaKnown RBP12.89□□□□□ -0.35
CTNS-209ENST00000574776 PRRC1Q96M27 445 aa12.89□□□□□ -0.35
CTNS-209ENST00000574776 DCLRE1CQ96SD1 692 aaKnown RBP12.89□□□□□ -0.35
CTNS-209ENST00000574776 FNDC11Q9BVV2 318 aa12.89□□□□□ -0.35
CTNS-209ENST00000574776 VIPAS39Q9H9C1 493 aa12.89□□□□□ -0.35
CTNS-209ENST00000574776 ELOVL3Q9HB03 270 aa12.89□□□□□ -0.35
CTNS-209ENST00000574776 GMPR2Q9P2T1 348 aaKnown RBP12.89□□□□□ -0.35
CTNS-209ENST00000574776 ZDHHC8Q9ULC8 765 aa12.89□□□□□ -0.35
CTNS-209ENST00000574776 ELOVL7A1L3X0 281 aa12.88□□□□□ -0.35
CTNS-209ENST00000574776 TMEM89A2RUT3 159 aa12.88□□□□□ -0.35
CTNS-209ENST00000574776 A6NIZ1 184 aa12.88□□□□□ -0.35
CTNS-209ENST00000574776 C12orf71A8MTZ7 269 aa12.88□□□□□ -0.35
CTNS-209ENST00000574776 EFCAB9A8MZ26 197 aa12.88□□□□□ -0.35
CTNS-209ENST00000574776 J3KTA2 159 aa12.88□□□□□ -0.35
CTNS-209ENST00000574776 ADH4P08319 380 aa12.88□□□□□ -0.35
CTNS-209ENST00000574776 TROVE2P10155 538 aaKnown RBP eCLIP12.88□□□□□ -0.35
CTNS-209ENST00000574776 ARHGDIAP52565 204 aa12.88□□□□□ -0.35
CTNS-209ENST00000574776 RAP1BP61224 184 aa12.88□□□□□ -0.35
CTNS-209ENST00000574776 RAP1AP62834 184 aa12.88□□□□□ -0.35
CTNS-209ENST00000574776 PRKCDQ05655 676 aa12.88□□□□□ -0.35
CTNS-209ENST00000574776 SLC3A1Q07837 685 aa12.88□□□□□ -0.35
CTNS-209ENST00000574776 PSG7Q13046 419 aa12.88□□□□□ -0.35
CTNS-209ENST00000574776 TRAM2Q15035 370 aa12.88□□□□□ -0.35
CTNS-209ENST00000574776 MAPRE2Q15555 327 aa12.88□□□□□ -0.35
CTNS-209ENST00000574776 FOXL2NBQ6ZUU3 175 aa12.88□□□□□ -0.35
CTNS-209ENST00000574776 VTCN1Q7Z7D3 282 aa12.88□□□□□ -0.35
CTNS-209ENST00000574776 OAFQ86UD1 273 aa12.88□□□□□ -0.35
CTNS-209ENST00000574776 LZICQ8WZA0 190 aa12.88□□□□□ -0.35
CTNS-209ENST00000574776 JMJD8Q96S16 334 aa12.88□□□□□ -0.35
CTNS-209ENST00000574776 SLC6A7Q99884 636 aa12.88□□□□□ -0.35
CTNS-209ENST00000574776 EMC7Q9NPA0 242 aa12.88□□□□□ -0.35
CTNS-209ENST00000574776 MAN2C1Q9NTJ4 1040 aa12.88□□□□□ -0.35
CTNS-209ENST00000574776 MRGBPQ9NV56 204 aa12.88□□□□□ -0.35
CTNS-209ENST00000574776 DCAF16Q9NXF7 216 aa12.88□□□□□ -0.35
CTNS-209ENST00000574776 OPN4Q9UHM6 478 aa12.88□□□□□ -0.35
CTNS-209ENST00000574776 H7C1C5 153 aa12.87□□□□□ -0.35
CTNS-209ENST00000574776 FFAR1O14842 300 aa12.87□□□□□ -0.35
CTNS-209ENST00000574776 TIMM8AO60220 97 aaPredicted RBP12.87□□□□□ -0.35
CTNS-209ENST00000574776 ICMTO60725 284 aa12.87□□□□□ -0.35
CTNS-209ENST00000574776 SBK2P0C263 348 aa12.87□□□□□ -0.35
CTNS-209ENST00000574776 MSR1P21757 451 aa12.87□□□□□ -0.35
CTNS-209ENST00000574776 ZFP36P26651 326 aaKnown RBP12.87□□□□□ -0.35
CTNS-209ENST00000574776 COMPP49747 757 aaPredicted RBP12.87□□□□□ -0.35
CTNS-209ENST00000574776 LCN6P62502 163 aa12.87□□□□□ -0.35
CTNS-209ENST00000574776 TNFAIP6P98066 277 aaPredicted RBP12.87□□□□□ -0.35
CTNS-209ENST00000574776 CDK5R2Q13319 367 aa12.87□□□□□ -0.35
CTNS-209ENST00000574776 MTX3Q5HYI7 312 aa12.87□□□□□ -0.35
CTNS-209ENST00000574776 FAM205BPQ63HN1 556 aa12.87□□□□□ -0.35
CTNS-209ENST00000574776 CGB2Q6NT52 195 aa12.87□□□□□ -0.35
CTNS-209ENST00000574776 TBPL2Q6SJ96 375 aa12.87□□□□□ -0.35
CTNS-209ENST00000574776 ARL9Q6T311 187 aa12.87□□□□□ -0.35
CTNS-209ENST00000574776 SYT9Q86SS6 491 aa12.87□□□□□ -0.35
CTNS-209ENST00000574776 TREML1Q86YW5 311 aa12.87□□□□□ -0.35
CTNS-209ENST00000574776 C3orf56Q8N813 242 aa12.87□□□□□ -0.35
CTNS-209ENST00000574776 OR13C2Q8NGS9 318 aa12.87□□□□□ -0.35
CTNS-209ENST00000574776 ST7LQ8TDW4 575 aa12.87□□□□□ -0.35
CTNS-209ENST00000574776 C22orf15Q8WYQ4 148 aa12.87□□□□□ -0.35
CTNS-209ENST00000574776 DIRC2Q96SL1 478 aa12.87□□□□□ -0.35
CTNS-209ENST00000574776 RBM4Q9BWF3 364 aaKnown RBP12.87□□□□□ -0.35
CTNS-209ENST00000574776 SUCNR1Q9BXA5 334 aa12.87□□□□□ -0.35
CTNS-209ENST00000574776 POFUT1Q9H488 388 aa12.87□□□□□ -0.35
CTNS-209ENST00000574776 POLE4Q9NR33 117 aa12.87□□□□□ -0.35
CTNS-209ENST00000574776 FGFR1OP2Q9NVK5 253 aa12.87□□□□□ -0.35
CTNS-209ENST00000574776 CMTM6Q9NX76 183 aa12.87□□□□□ -0.35
CTNS-209ENST00000574776 A0A087WUU8 490 aa12.86□□□□□ -0.35
CTNS-209ENST00000574776 H3BSA7 217 aa12.86□□□□□ -0.35
CTNS-209ENST00000574776 ABHD16AO95870 558 aa12.86□□□□□ -0.35
CTNS-209ENST00000574776 IFNW1P05000 195 aa12.86□□□□□ -0.35
CTNS-209ENST00000574776 CD55P08174 381 aa12.86□□□□□ -0.35
CTNS-209ENST00000574776 GATA3P23771 443 aa12.86□□□□□ -0.35
CTNS-209ENST00000574776 RPL4P36578 427 aaKnown RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms