RNA–Protein interactions for RNA: ENST00000573936.5

CHD3-216, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-216ENST00000573936 PLEKHA6Q9Y2H5 1048 aa9.58□□□□□ -0.88
CHD3-216ENST00000573936 SPEF1Q9Y4P9 236 aa9.58□□□□□ -0.88
CHD3-216ENST00000573936 TIMM10BQ9Y5J6 103 aa9.58□□□□□ -0.88
CHD3-216ENST00000573936 OR6C68A6NDL8 312 aa9.57□□□□□ -0.88
CHD3-216ENST00000573936 SAC3D1A6NKF1 404 aa9.57□□□□□ -0.88
CHD3-216ENST00000573936 MMP7P09237 267 aaPredicted RBP9.57□□□□□ -0.88
CHD3-216ENST00000573936 PATE4P0C8F1 98 aa9.57□□□□□ -0.88
CHD3-216ENST00000573936 PAICSP22234 425 aaKnown RBP9.57□□□□□ -0.88
CHD3-216ENST00000573936 APLNRP35414 380 aa9.57□□□□□ -0.88
CHD3-216ENST00000573936 FABP6P51161 128 aa9.57□□□□□ -0.88
CHD3-216ENST00000573936 SLC25A1P53007 311 aa9.57□□□□□ -0.88
CHD3-216ENST00000573936 CRISP1P54107 249 aa9.57□□□□□ -0.88
CHD3-216ENST00000573936 SLC34A1Q06495 639 aa9.57□□□□□ -0.88
CHD3-216ENST00000573936 GINS1Q14691 196 aa9.57□□□□□ -0.88
CHD3-216ENST00000573936 RAB39AQ14964 217 aa9.57□□□□□ -0.88
CHD3-216ENST00000573936 KCNMB1Q16558 191 aa9.57□□□□□ -0.88
CHD3-216ENST00000573936 TBC1D28Q2M2D7 210 aa9.57□□□□□ -0.88
CHD3-216ENST00000573936 KDM4DQ6B0I6 523 aa9.57□□□□□ -0.88
CHD3-216ENST00000573936 ZNF544Q6NX49 715 aa9.57□□□□□ -0.88
CHD3-216ENST00000573936 OR6V1Q8N148 313 aa9.57□□□□□ -0.88
CHD3-216ENST00000573936 OR2T4Q8NH00 348 aa9.57□□□□□ -0.88
CHD3-216ENST00000573936 FGFBP3Q8TAT2 258 aa9.57□□□□□ -0.88
CHD3-216ENST00000573936 SMAP2Q8WU79 429 aaPredicted RBP9.57□□□□□ -0.88
CHD3-216ENST00000573936 DDOQ99489 341 aa9.57□□□□□ -0.88
CHD3-216ENST00000573936 DHRS9Q9BPW9 319 aa9.57□□□□□ -0.88
CHD3-216ENST00000573936 RBM4BQ9BQ04 359 aaKnown RBP9.57□□□□□ -0.88
CHD3-216ENST00000573936 RBM4Q9BWF3 364 aaKnown RBP9.57□□□□□ -0.88
CHD3-216ENST00000573936 ZNF416Q9BWM5 594 aa9.57□□□□□ -0.88
CHD3-216ENST00000573936 PRRG3Q9BZD7 231 aa9.57□□□□□ -0.88
CHD3-216ENST00000573936 SLC25A19Q9HC21 320 aa9.57□□□□□ -0.88
CHD3-216ENST00000573936 CMC2Q9NRP2 79 aa9.57□□□□□ -0.88
CHD3-216ENST00000573936 OAZ3Q9UMX2 235 aa9.57□□□□□ -0.88
CHD3-216ENST00000573936 IGLV1-36A0A0B4J1U3 117 aa9.56□□□□□ -0.88
CHD3-216ENST00000573936 IGHV2OR16-5A0A0B4J2B6 119 aa9.56□□□□□ -0.88
CHD3-216ENST00000573936 ATP6V1G2-DDX39BF2Z307 99 aa9.56□□□□□ -0.88
CHD3-216ENST00000573936 CASQ2O14958 399 aaPredicted RBP9.56□□□□□ -0.88
CHD3-216ENST00000573936 ATE1O95260 518 aa9.56□□□□□ -0.88
CHD3-216ENST00000573936 CELA3BP08861 270 aa9.56□□□□□ -0.88
CHD3-216ENST00000573936 ZNF32P17041 273 aa9.56□□□□□ -0.88
CHD3-216ENST00000573936 CD53P19397 219 aa9.56□□□□□ -0.88
CHD3-216ENST00000573936 APOBEC3AP31941 199 aaPredicted RBP9.56□□□□□ -0.88
CHD3-216ENST00000573936 BLVRAP53004 296 aa9.56□□□□□ -0.88
CHD3-216ENST00000573936 GALK2Q01415 458 aa9.56□□□□□ -0.88
CHD3-216ENST00000573936 SPOCK1Q08629 439 aa9.56□□□□□ -0.88
CHD3-216ENST00000573936 SCRN3Q0VDG4 424 aa9.56□□□□□ -0.88
CHD3-216ENST00000573936 AQP6Q13520 282 aa9.56□□□□□ -0.88
CHD3-216ENST00000573936 ENDOGQ14249 297 aaKnown RBP9.56□□□□□ -0.88
CHD3-216ENST00000573936 TRIP10Q15642 601 aa9.56□□□□□ -0.88
CHD3-216ENST00000573936 ZNF362Q5T0B9 420 aaPredicted RBP9.56□□□□□ -0.88
CHD3-216ENST00000573936 AGAP6Q5VW22 663 aa9.56□□□□□ -0.88
CHD3-216ENST00000573936 LPCAT4Q643R3 524 aa9.56□□□□□ -0.88
CHD3-216ENST00000573936 ACSM5Q6NUN0 579 aa9.56□□□□□ -0.88
CHD3-216ENST00000573936 BIVMQ86UB2 503 aa9.56□□□□□ -0.88
CHD3-216ENST00000573936 FBXL14Q8N1E6 418 aa9.56□□□□□ -0.88
CHD3-216ENST00000573936 CYB561A3Q8NBI2 242 aa9.56□□□□□ -0.88
CHD3-216ENST00000573936 SLC30A7Q8NEW0 376 aa9.56□□□□□ -0.88
CHD3-216ENST00000573936 NUP37Q8NFH4 326 aa9.56□□□□□ -0.88
CHD3-216ENST00000573936 PROKR2Q8NFJ6 384 aa9.56□□□□□ -0.88
CHD3-216ENST00000573936 OR10H5Q8NGA6 315 aa9.56□□□□□ -0.88
CHD3-216ENST00000573936 TMEM171Q8WVE6 324 aa9.56□□□□□ -0.88
CHD3-216ENST00000573936 C11orf40Q8WZ69 217 aa9.56□□□□□ -0.88
CHD3-216ENST00000573936 HTRA1Q92743 480 aa9.56□□□□□ -0.88
CHD3-216ENST00000573936 NEUROG1Q92886 237 aa9.56□□□□□ -0.88
CHD3-216ENST00000573936 MBD6Q96DN6 1003 aa9.56□□□□□ -0.88
CHD3-216ENST00000573936 FBXO17Q96EF6 278 aa9.56□□□□□ -0.88
CHD3-216ENST00000573936 PLEKHA8Q96JA3 519 aa9.56□□□□□ -0.88
CHD3-216ENST00000573936 TSSK2Q96PF2 358 aa9.56□□□□□ -0.88
CHD3-216ENST00000573936 CCL19Q99731 98 aa9.56□□□□□ -0.88
CHD3-216ENST00000573936 CIB1Q99828 191 aa9.56□□□□□ -0.88
CHD3-216ENST00000573936 CDADC1Q9BWV3 514 aa9.56□□□□□ -0.88
CHD3-216ENST00000573936 GRIP2Q9C0E4 1043 aa9.56□□□□□ -0.88
CHD3-216ENST00000573936 CDH20Q9HBT6 801 aa9.56□□□□□ -0.88
CHD3-216ENST00000573936 NOX3Q9HBY0 568 aa9.56□□□□□ -0.88
CHD3-216ENST00000573936 BEX4Q9NWD9 120 aaPredicted RBP9.56□□□□□ -0.88
CHD3-216ENST00000573936 KCNG2Q9UJ96 466 aa9.56□□□□□ -0.88
CHD3-216ENST00000573936 POLR1DQ9Y2S0 133 aa9.56□□□□□ -0.88
CHD3-216ENST00000573936 ORC6Q9Y5N6 252 aa9.56□□□□□ -0.88
CHD3-216ENST00000573936 ZANQ9Y493 2812 aa9.56□□□□□ -0.88
CHD3-216ENST00000573936 E7EQL1 145 aa9.55□□□□□ -0.88
CHD3-216ENST00000573936 PRR23D1E9PI22 279 aaPredicted RBP9.55□□□□□ -0.88
CHD3-216ENST00000573936 DCTN6O00399 190 aa9.55□□□□□ -0.88
CHD3-216ENST00000573936 SURF4O15260 269 aa9.55□□□□□ -0.88
CHD3-216ENST00000573936 HLA-DQA2P01906 255 aa9.55□□□□□ -0.88
CHD3-216ENST00000573936 SCG5P05408 212 aa9.55□□□□□ -0.88
CHD3-216ENST00000573936 PRR23D2P0DMB1 279 aaPredicted RBP9.55□□□□□ -0.88
CHD3-216ENST00000573936 GAAP10253 952 aa9.55□□□□□ -0.88
CHD3-216ENST00000573936 COX5BP10606 129 aa9.55□□□□□ -0.88
CHD3-216ENST00000573936 BMP4P12644 408 aa9.55□□□□□ -0.88
CHD3-216ENST00000573936 ZNF35P13682 527 aa9.55□□□□□ -0.88
CHD3-216ENST00000573936 ZNF823P16415 610 aa9.55□□□□□ -0.88
CHD3-216ENST00000573936 IGFBP5P24593 272 aa9.55□□□□□ -0.88
CHD3-216ENST00000573936 PEX2P28328 305 aa9.55□□□□□ -0.88
CHD3-216ENST00000573936 CALCRP30988 508 aa9.55□□□□□ -0.88
CHD3-216ENST00000573936 FMO3P31513 532 aa9.55□□□□□ -0.88
CHD3-216ENST00000573936 TTKP33981 857 aa9.55□□□□□ -0.88
CHD3-216ENST00000573936 RPS23P62266 143 aaKnown RBP9.55□□□□□ -0.88
CHD3-216ENST00000573936 ADAM8P78325 824 aa9.55□□□□□ -0.88
CHD3-216ENST00000573936 PSG4Q00888 419 aa9.55□□□□□ -0.88
CHD3-216ENST00000573936 TEKQ02763 1124 aa9.55□□□□□ -0.88
CHD3-216ENST00000573936 DAG1Q14118 895 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms