RNA–Protein interactions for RNA: ENST00000573166.5

SMG6-213, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best)

Gene SMG6, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-213ENST00000573166 PRELID1Q9Y255 219 aa9.06□□□□□ -0.96
SMG6-213ENST00000573166 ZNF281Q9Y2X9 895 aa9.06□□□□□ -0.96
SMG6-213ENST00000573166 LOC102723996A0A087X1L8 192 aa9.06□□□□□ -0.96
SMG6-213ENST00000573166 TMIGD3P0DMS9 266 aaPredicted RBP9.06□□□□□ -0.96
SMG6-213ENST00000573166 CLDN20P56880 219 aa9.06□□□□□ -0.96
SMG6-213ENST00000573166 GRB2P62993 217 aaKnown RBP9.06□□□□□ -0.96
SMG6-213ENST00000573166 PLCXD3Q63HM9 321 aa9.06□□□□□ -0.96
SMG6-213ENST00000573166 SPACA3Q8IXA5 215 aa9.06□□□□□ -0.96
SMG6-213ENST00000573166 NFAM1Q8NET5 270 aaPredicted RBP9.06□□□□□ -0.96
SMG6-213ENST00000573166 GRPEL2Q8TAA5 225 aa9.06□□□□□ -0.96
SMG6-213ENST00000573166 OR5M11Q96RB7 305 aa9.06□□□□□ -0.96
SMG6-213ENST00000573166 RNF167Q9H6Y7 350 aa9.06□□□□□ -0.96
SMG6-213ENST00000573166 MEPEQ9NQ76 525 aaPredicted RBP9.06□□□□□ -0.96
SMG6-213ENST00000573166 ERVK13-1Q9NX77 482 aa9.06□□□□□ -0.96
SMG6-213ENST00000573166 HIF3AQ9Y2N7 669 aa9.06□□□□□ -0.96
SMG6-213ENST00000573166 A0A0J9YW62 118 aa9.06□□□□□ -0.96
SMG6-213ENST00000573166 ACOD1A6NK06 481 aa9.06□□□□□ -0.96
SMG6-213ENST00000573166 FAM90A27PA6NNH2 459 aa9.06□□□□□ -0.96
SMG6-213ENST00000573166 IMPA2O14732 288 aa9.06□□□□□ -0.96
SMG6-213ENST00000573166 HSPA12AO43301 675 aa9.06□□□□□ -0.96
SMG6-213ENST00000573166 CSN2P05814 226 aa9.06□□□□□ -0.96
SMG6-213ENST00000573166 UCHL1P09936 223 aa9.06□□□□□ -0.96
SMG6-213ENST00000573166 SPOCK1Q08629 439 aa9.06□□□□□ -0.96
SMG6-213ENST00000573166 RAB11BQ15907 218 aa9.06□□□□□ -0.96
SMG6-213ENST00000573166 AWAT2Q6E213 333 aa9.06□□□□□ -0.96
SMG6-213ENST00000573166 TMEM211Q6ICI0 200 aa9.06□□□□□ -0.96
SMG6-213ENST00000573166 GDPGP1Q6ZNW5 385 aa9.06□□□□□ -0.96
SMG6-213ENST00000573166 SHISA5Q8N114 240 aa9.06□□□□□ -0.96
SMG6-213ENST00000573166 BHLHE23Q8NDY6 225 aa9.06□□□□□ -0.96
SMG6-213ENST00000573166 ABHD3Q8WU67 409 aa9.06□□□□□ -0.96
SMG6-213ENST00000573166 TMEM106AQ96A25 262 aa9.06□□□□□ -0.96
SMG6-213ENST00000573166 ATG5Q9H1Y0 275 aa9.06□□□□□ -0.96
SMG6-213ENST00000573166 ZNF226Q9NYT6 803 aa9.06□□□□□ -0.96
SMG6-213ENST00000573166 A0A1W2PQL4 384 aaPredicted RBP9.05□□□□□ -0.96
SMG6-213ENST00000573166 TMEM212A6NML5 194 aa9.05□□□□□ -0.96
SMG6-213ENST00000573166 P2RY10O00398 339 aa9.05□□□□□ -0.96
SMG6-213ENST00000573166 YES1P07947 543 aa9.05□□□□□ -0.96
SMG6-213ENST00000573166 APEHP13798 732 aaKnown RBP9.05□□□□□ -0.96
SMG6-213ENST00000573166 SLC2A5P22732 501 aa9.05□□□□□ -0.96
SMG6-213ENST00000573166 MAP2K3P46734 347 aa9.05□□□□□ -0.96
SMG6-213ENST00000573166 GNG2P59768 71 aa9.05□□□□□ -0.96
SMG6-213ENST00000573166 ARF1P84077 181 aaKnown RBP9.05□□□□□ -0.96
SMG6-213ENST00000573166 HES5Q5TA89 166 aa9.05□□□□□ -0.96
SMG6-213ENST00000573166 LIN54Q6MZP7 749 aa9.05□□□□□ -0.96
SMG6-213ENST00000573166 MOB3CQ70IA8 216 aa9.05□□□□□ -0.96
SMG6-213ENST00000573166 PGAP1Q75T13 922 aa9.05□□□□□ -0.96
SMG6-213ENST00000573166 ZNF611Q8N823 705 aa9.05□□□□□ -0.96
SMG6-213ENST00000573166 OR13C9Q8NGT0 318 aa9.05□□□□□ -0.96
SMG6-213ENST00000573166 HAS2Q92819 552 aa9.05□□□□□ -0.96
SMG6-213ENST00000573166 ABHD17AQ96GS6 310 aa9.05□□□□□ -0.96
SMG6-213ENST00000573166 MYEF2Q9P2K5 600 aaKnown RBP9.05□□□□□ -0.96
SMG6-213ENST00000573166 KCNG2Q9UJ96 466 aa9.05□□□□□ -0.96
SMG6-213ENST00000573166 C17orf51A8MQB3 221 aa9.05□□□□□ -0.96
SMG6-213ENST00000573166 MAGEB4O15481 346 aaPredicted RBP9.05□□□□□ -0.96
SMG6-213ENST00000573166 HTR3BO95264 441 aa9.05□□□□□ -0.96
SMG6-213ENST00000573166 CAPNS1P04632 268 aa9.05□□□□□ -0.96
SMG6-213ENST00000573166 ARR3P36575 388 aa9.05□□□□□ -0.96
SMG6-213ENST00000573166 ZNF468Q5VIY5 522 aaPredicted RBP9.05□□□□□ -0.96
SMG6-213ENST00000573166 SIGLEC12Q96PQ1 595 aa9.05□□□□□ -0.96
SMG6-213ENST00000573166 DNAJB11Q9UBS4 358 aa9.05□□□□□ -0.96
SMG6-213ENST00000573166 OR52A1Q9UKL2 312 aa9.05□□□□□ -0.96
SMG6-213ENST00000573166 C5orf49A4QMS7 147 aa9.05□□□□□ -0.96
SMG6-213ENST00000573166 M0R135 149 aa9.05□□□□□ -0.96
SMG6-213ENST00000573166 GLRX5Q86SX6 157 aa9.05□□□□□ -0.96
SMG6-213ENST00000573166 TUSC5Q8IXB3 177 aa9.05□□□□□ -0.96
SMG6-213ENST00000573166 ABHD4Q8TB40 342 aa9.05□□□□□ -0.96
SMG6-213ENST00000573166 C11orf40Q8WZ69 217 aa9.05□□□□□ -0.96
SMG6-213ENST00000573166 HSD17B8Q92506 261 aa9.05□□□□□ -0.96
SMG6-213ENST00000573166 ZNF799Q96GE5 643 aa9.05□□□□□ -0.96
SMG6-213ENST00000573166 ATF6BQ99941 703 aa9.05□□□□□ -0.96
SMG6-213ENST00000573166 CST11Q9H112 138 aa9.05□□□□□ -0.96
SMG6-213ENST00000573166 PMF1-BGLAPU3KQ54 211 aa9.05□□□□□ -0.96
SMG6-213ENST00000573166 RANBP2P49792 3224 aaKnown RBP9.05□□□□□ -0.96
SMG6-213ENST00000573166 ZNF17P17021 662 aa9.04□□□□□ -0.96
SMG6-213ENST00000573166 ALKBH1Q13686 389 aaKnown RBP9.04□□□□□ -0.96
SMG6-213ENST00000573166 SLC22A25Q6T423 547 aa9.04□□□□□ -0.96
SMG6-213ENST00000573166 OR6V1Q8N148 313 aa9.04□□□□□ -0.96
SMG6-213ENST00000573166 DTX3Q8N9I9 347 aa9.04□□□□□ -0.96
SMG6-213ENST00000573166 OR52N1Q8NH53 320 aa9.04□□□□□ -0.96
SMG6-213ENST00000573166 AKR7LQ8NHP1 331 aa9.04□□□□□ -0.96
SMG6-213ENST00000573166 C15orf40Q8WUR7 153 aa9.04□□□□□ -0.96
SMG6-213ENST00000573166 MICU1Q9BPX6 476 aa9.04□□□□□ -0.96
SMG6-213ENST00000573166 COMMD9Q9P000 198 aa9.04□□□□□ -0.96
SMG6-213ENST00000573166 OR6C68A6NDL8 312 aa9.04□□□□□ -0.96
SMG6-213ENST00000573166 ORC5O43913 435 aa9.04□□□□□ -0.96
SMG6-213ENST00000573166 MPIG6BO95866 241 aa9.04□□□□□ -0.96
SMG6-213ENST00000573166 CX3CR1P49238 355 aa9.04□□□□□ -0.96
SMG6-213ENST00000573166 SLC35A2P78381 396 aa9.04□□□□□ -0.96
SMG6-213ENST00000573166 CNN3Q15417 329 aaKnown RBP9.04□□□□□ -0.96
SMG6-213ENST00000573166 CADM3Q8N126 398 aa9.04□□□□□ -0.96
SMG6-213ENST00000573166 OR8D4Q8NGM9 314 aa9.04□□□□□ -0.96
SMG6-213ENST00000573166 AKAP1Q92667 903 aaKnown RBP eCLIP9.04□□□□□ -0.964e-7■■■■□ 26
SMG6-213ENST00000573166 RND1Q92730 232 aa9.04□□□□□ -0.96
SMG6-213ENST00000573166 TSPAN32Q96QS1 320 aa9.04□□□□□ -0.96
SMG6-213ENST00000573166 PDCD1LG2Q9BQ51 273 aa9.04□□□□□ -0.96
SMG6-213ENST00000573166 ZNF442Q9H7R0 627 aa9.04□□□□□ -0.96
SMG6-213ENST00000573166 MBD2Q9UBB5 411 aa9.04□□□□□ -0.96
SMG6-213ENST00000573166 EXTL2Q9UBQ6 330 aa9.04□□□□□ -0.96
SMG6-213ENST00000573166 PLEKHA6Q9Y2H5 1048 aa9.04□□□□□ -0.96
SMG6-213ENST00000573166 M0R1B8 84 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms