RNA–Protein interactions for RNA: ENST00000570828.5

CTDNEP1-205, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-205ENST00000570828 MOGQ16653 247 aa10.58□□□□□ -0.72
CTDNEP1-205ENST00000570828 PCGF3Q3KNV8 242 aa10.58□□□□□ -0.72
CTDNEP1-205ENST00000570828 FGD3Q5JSP0 725 aa10.58□□□□□ -0.72
CTDNEP1-205ENST00000570828 FAM27BQ5VT28 67 aa10.58□□□□□ -0.72
CTDNEP1-205ENST00000570828 SLC25A47Q6Q0C1 308 aa10.58□□□□□ -0.72
CTDNEP1-205ENST00000570828 LINC01356Q8N9X3 169 aa10.58□□□□□ -0.72
CTDNEP1-205ENST00000570828 LRRC75AQ8NAA5 344 aa10.58□□□□□ -0.72
CTDNEP1-205ENST00000570828 FAM156AQ8NDB6 213 aa10.58□□□□□ -0.72
CTDNEP1-205ENST00000570828 CPEB3Q8NE35 698 aaKnown RBP10.58□□□□□ -0.72
CTDNEP1-205ENST00000570828 OR1J1Q8NGS3 322 aa10.58□□□□□ -0.72
CTDNEP1-205ENST00000570828 AKR7LQ8NHP1 331 aa10.58□□□□□ -0.72
CTDNEP1-205ENST00000570828 SOX7Q9BT81 388 aa10.58□□□□□ -0.72
CTDNEP1-205ENST00000570828 ZNF416Q9BWM5 594 aa10.58□□□□□ -0.72
CTDNEP1-205ENST00000570828 NMNAT1Q9HAN9 279 aaPredicted RBP10.58□□□□□ -0.72
CTDNEP1-205ENST00000570828 EIF3KQ9UBQ5 218 aaKnown RBP10.58□□□□□ -0.72
CTDNEP1-205ENST00000570828 GRHPRQ9UBQ7 328 aa10.58□□□□□ -0.72
CTDNEP1-205ENST00000570828 FAM32AQ9Y421 112 aaKnown RBP10.58□□□□□ -0.72
CTDNEP1-205ENST00000570828 ENPP4Q9Y6X5 453 aa10.58□□□□□ -0.72
CTDNEP1-205ENST00000570828 CUBNO60494 3623 aa10.58□□□□□ -0.72
CTDNEP1-205ENST00000570828 C5orf49A4QMS7 147 aa10.57□□□□□ -0.72
CTDNEP1-205ENST00000570828 C12orf71A8MTZ7 269 aa10.57□□□□□ -0.72
CTDNEP1-205ENST00000570828 C17orf100A8MU93 164 aa10.57□□□□□ -0.72
CTDNEP1-205ENST00000570828 H7C1C5 153 aa10.57□□□□□ -0.72
CTDNEP1-205ENST00000570828 XKRYO14609 159 aa10.57□□□□□ -0.72
CTDNEP1-205ENST00000570828 CDC42EP2O14613 210 aa10.57□□□□□ -0.72
CTDNEP1-205ENST00000570828 PPIHO43447 177 aaKnown RBP10.57□□□□□ -0.72
CTDNEP1-205ENST00000570828 ATP8B1O43520 1251 aa10.57□□□□□ -0.72
CTDNEP1-205ENST00000570828 H1F0P07305 194 aaKnown RBP10.57□□□□□ -0.72
CTDNEP1-205ENST00000570828 CD14P08571 375 aa10.57□□□□□ -0.72
CTDNEP1-205ENST00000570828 CST2P09228 141 aa10.57□□□□□ -0.72
CTDNEP1-205ENST00000570828 MSR1P21757 451 aa10.57□□□□□ -0.72
CTDNEP1-205ENST00000570828 LAP3P28838 519 aa10.57□□□□□ -0.72
CTDNEP1-205ENST00000570828 PRDX6P30041 224 aa10.57□□□□□ -0.72
CTDNEP1-205ENST00000570828 GCH1P30793 250 aa10.57□□□□□ -0.72
CTDNEP1-205ENST00000570828 MAGEB1P43366 347 aa10.57□□□□□ -0.72
CTDNEP1-205ENST00000570828 CDH15P55291 814 aa10.57□□□□□ -0.72
CTDNEP1-205ENST00000570828 LCN6P62502 163 aa10.57□□□□□ -0.72
CTDNEP1-205ENST00000570828 CCL8P80075 99 aa10.57□□□□□ -0.72
CTDNEP1-205ENST00000570828 PSG4Q00888 419 aa10.57□□□□□ -0.72
CTDNEP1-205ENST00000570828 FHL1Q13642 323 aa10.57□□□□□ -0.72
CTDNEP1-205ENST00000570828 CR1LQ2VPA4 569 aa10.57□□□□□ -0.72
CTDNEP1-205ENST00000570828 TBPL2Q6SJ96 375 aa10.57□□□□□ -0.72
CTDNEP1-205ENST00000570828 TMPRSS11FQ6ZWK6 438 aa10.57□□□□□ -0.72
CTDNEP1-205ENST00000570828 ALDH16A1Q8IZ83 802 aa10.57□□□□□ -0.72
CTDNEP1-205ENST00000570828 POM121L2Q96KW2 1035 aa10.57□□□□□ -0.72
CTDNEP1-205ENST00000570828 ZNF570Q96NI8 536 aa10.57□□□□□ -0.72
CTDNEP1-205ENST00000570828 OR2H1Q9GZK4 316 aa10.57□□□□□ -0.72
CTDNEP1-205ENST00000570828 MYLK2Q9H1R3 596 aa10.57□□□□□ -0.72
CTDNEP1-205ENST00000570828 NARFLQ9H6Q4 476 aa10.57□□□□□ -0.72
CTDNEP1-205ENST00000570828 KRCC1Q9NPI7 259 aaPredicted RBP10.57□□□□□ -0.72
CTDNEP1-205ENST00000570828 ZNF275Q9NSD4 429 aaPredicted RBP10.57□□□□□ -0.72
CTDNEP1-205ENST00000570828 ADA2Q9NZK5 511 aa10.57□□□□□ -0.72
CTDNEP1-205ENST00000570828 SAMD4AQ9UPU9 718 aaKnown RBP10.57□□□□□ -0.72
CTDNEP1-205ENST00000570828 ADAM18Q9Y3Q7 739 aa10.57□□□□□ -0.72
CTDNEP1-205ENST00000570828 TIMM10BQ9Y5J6 103 aa10.57□□□□□ -0.72
CTDNEP1-205ENST00000570828 A0A1W2PRQ8 180 aa10.56□□□□□ -0.72
CTDNEP1-205ENST00000570828 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.56□□□□□ -0.72
CTDNEP1-205ENST00000570828 PCMT1P22061 227 aa10.56□□□□□ -0.72
CTDNEP1-205ENST00000570828 COL8A2P25067 703 aa10.56□□□□□ -0.72
CTDNEP1-205ENST00000570828 WNT5AP41221 380 aa10.56□□□□□ -0.72
CTDNEP1-205ENST00000570828 TMEM33P57088 247 aa10.56□□□□□ -0.72
CTDNEP1-205ENST00000570828 DGCR6Q14129 220 aa10.56□□□□□ -0.72
CTDNEP1-205ENST00000570828 ZNF718Q3SXZ3 478 aa10.56□□□□□ -0.72
CTDNEP1-205ENST00000570828 ZBED5Q49AG3 693 aa10.56□□□□□ -0.72
CTDNEP1-205ENST00000570828 SPATA46Q5T0L3 261 aa10.56□□□□□ -0.72
CTDNEP1-205ENST00000570828 FOXL2NBQ6ZUU3 175 aa10.56□□□□□ -0.72
CTDNEP1-205ENST00000570828 RFPL4BQ6ZWI9 263 aa10.56□□□□□ -0.72
CTDNEP1-205ENST00000570828 ZNF101Q8IZC7 436 aa10.56□□□□□ -0.72
CTDNEP1-205ENST00000570828 ABHD4Q8TB40 342 aa10.56□□□□□ -0.72
CTDNEP1-205ENST00000570828 SLC7A13Q8TCU3 470 aa10.56□□□□□ -0.72
CTDNEP1-205ENST00000570828 YIPF5Q969M3 257 aa10.56□□□□□ -0.72
CTDNEP1-205ENST00000570828 FAM46AQ96IP4 442 aaKnown RBP10.56□□□□□ -0.72
CTDNEP1-205ENST00000570828 KRTAP9-2Q9BYQ4 174 aa10.56□□□□□ -0.72
CTDNEP1-205ENST00000570828 WNT5BQ9H1J7 359 aa10.56□□□□□ -0.72
CTDNEP1-205ENST00000570828 POLE4Q9NR33 117 aa10.56□□□□□ -0.72
CTDNEP1-205ENST00000570828 DECR2Q9NUI1 292 aa10.56□□□□□ -0.72
CTDNEP1-205ENST00000570828 NKIRAS2Q9NYR9 191 aa10.56□□□□□ -0.72
CTDNEP1-205ENST00000570828 NDUFAF4Q9P032 175 aa10.56□□□□□ -0.72
CTDNEP1-205ENST00000570828 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.56□□□□□ -0.723e-8■□□□□ 9.7
CTDNEP1-205ENST00000570828 FBN3Q75N90 2809 aa10.55□□□□□ -0.72
CTDNEP1-205ENST00000570828 LOC100509620A0A075B734 347 aa10.55□□□□□ -0.72
CTDNEP1-205ENST00000570828 TEX13CA0A0J9YWL9 993 aa10.55□□□□□ -0.72
CTDNEP1-205ENST00000570828 PLSCR5A0PG75 271 aa10.55□□□□□ -0.72
CTDNEP1-205ENST00000570828 PRSS37A4D1T9 235 aa10.55□□□□□ -0.72
CTDNEP1-205ENST00000570828 B4DSR2 109 aa10.55□□□□□ -0.72
CTDNEP1-205ENST00000570828 AHCYL1O43865 530 aa10.55□□□□□ -0.72
CTDNEP1-205ENST00000570828 SNX3O60493 162 aa10.55□□□□□ -0.72
CTDNEP1-205ENST00000570828 CDC14BO60729 498 aa10.55□□□□□ -0.72
CTDNEP1-205ENST00000570828 RP2O75695 350 aa10.55□□□□□ -0.72
CTDNEP1-205ENST00000570828 NDUFB2O95178 105 aa10.55□□□□□ -0.72
CTDNEP1-205ENST00000570828 IGHV3-13P01766 116 aa10.55□□□□□ -0.72
CTDNEP1-205ENST00000570828 TFP02787 698 aa10.55□□□□□ -0.72
CTDNEP1-205ENST00000570828 RHCEP18577 417 aa10.55□□□□□ -0.72
CTDNEP1-205ENST00000570828 THBS2P35442 1172 aa10.55□□□□□ -0.72
CTDNEP1-205ENST00000570828 ZNF81P51508 661 aa10.55□□□□□ -0.72
CTDNEP1-205ENST00000570828 TEKQ02763 1124 aa10.55□□□□□ -0.72
CTDNEP1-205ENST00000570828 SCRN3Q0VDG4 424 aa10.55□□□□□ -0.72
CTDNEP1-205ENST00000570828 KRR1Q13601 381 aaKnown RBP10.55□□□□□ -0.72
CTDNEP1-205ENST00000570828 ENDOGQ14249 297 aaKnown RBP10.55□□□□□ -0.72
CTDNEP1-205ENST00000570828 KRT72Q14CN4 511 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms