RNA–Protein interactions for RNA: ENST00000569891.5

CYLD-216, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

TSL 1 (best)

Gene CYLD, Length 4,665 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-216ENST00000569891 OR13C3Q8NGS6 347 aa5.39□□□□□ -1.55
CYLD-216ENST00000569891 ABHD6Q9BV23 337 aa5.39□□□□□ -1.55
CYLD-216ENST00000569891 SLC17A5Q9NRA2 495 aa5.39□□□□□ -1.55
CYLD-216ENST00000569891 SPATA2Q9UM82 520 aa5.39□□□□□ -1.55
CYLD-216ENST00000569891 A0A0A6YYH2 397 aa5.39□□□□□ -1.55
CYLD-216ENST00000569891 A6NJ64 397 aa5.39□□□□□ -1.55
CYLD-216ENST00000569891 H7C1C5 153 aa5.39□□□□□ -1.55
CYLD-216ENST00000569891 MRPL33O75394 65 aaKnown RBP5.39□□□□□ -1.55
CYLD-216ENST00000569891 HPNP05981 417 aa5.39□□□□□ -1.55
CYLD-216ENST00000569891 SP1P08047 785 aa5.39□□□□□ -1.55
CYLD-216ENST00000569891 PITPNBP48739 271 aa5.39□□□□□ -1.55
CYLD-216ENST00000569891 EFNA3P52797 238 aa5.39□□□□□ -1.55
CYLD-216ENST00000569891 LCN6P62502 163 aa5.39□□□□□ -1.55
CYLD-216ENST00000569891 PLP2Q04941 152 aa5.39□□□□□ -1.55
CYLD-216ENST00000569891 ZNF57Q68EA5 555 aaPredicted RBP5.39□□□□□ -1.55
CYLD-216ENST00000569891 TMEM53Q6P2H8 277 aa5.39□□□□□ -1.55
CYLD-216ENST00000569891 CDH26Q8IXH8 852 aa5.39□□□□□ -1.55
CYLD-216ENST00000569891 TRMT10AQ8TBZ6 339 aaKnown RBP5.39□□□□□ -1.55
CYLD-216ENST00000569891 POC1BQ8TC44 478 aa5.39□□□□□ -1.55
CYLD-216ENST00000569891 CPT1CQ8TCG5 803 aa5.39□□□□□ -1.55
CYLD-216ENST00000569891 HAS2Q92819 552 aa5.39□□□□□ -1.55
CYLD-216ENST00000569891 C4orf45Q96LM5 186 aa5.39□□□□□ -1.55
CYLD-216ENST00000569891 OR10A2Q9H208 303 aa5.39□□□□□ -1.55
CYLD-216ENST00000569891 RNF122Q9H9V4 155 aa5.39□□□□□ -1.55
CYLD-216ENST00000569891 EXTL2Q9UBQ6 330 aa5.39□□□□□ -1.55
CYLD-216ENST00000569891 UPB1Q9UBR1 384 aa5.39□□□□□ -1.55
CYLD-216ENST00000569891 OR52A1Q9UKL2 312 aa5.39□□□□□ -1.55
CYLD-216ENST00000569891 A0A1W2PNR3 127 aa5.38□□□□□ -1.55
CYLD-216ENST00000569891 NAP1L6A6NFF2 107 aa5.38□□□□□ -1.55
CYLD-216ENST00000569891 FAM171A2A8MVW0 826 aa5.38□□□□□ -1.55
CYLD-216ENST00000569891 J3QRK9 145 aa5.38□□□□□ -1.55
CYLD-216ENST00000569891 AIPO00170 330 aa5.38□□□□□ -1.55
CYLD-216ENST00000569891 QDPRP09417 244 aa5.38□□□□□ -1.55
CYLD-216ENST00000569891 TCEA1P23193 301 aaKnown RBP5.38□□□□□ -1.55
CYLD-216ENST00000569891 ART1P52961 327 aa5.38□□□□□ -1.55
CYLD-216ENST00000569891 TGFBR3Q03167 851 aa5.38□□□□□ -1.55
CYLD-216ENST00000569891 MRPL49Q13405 166 aaKnown RBP5.38□□□□□ -1.55
CYLD-216ENST00000569891 CAMK2DQ13557 499 aa5.38□□□□□ -1.55
CYLD-216ENST00000569891 RAB11BQ15907 218 aa5.38□□□□□ -1.55
CYLD-216ENST00000569891 C10orf128Q5T292 105 aa5.38□□□□□ -1.55
CYLD-216ENST00000569891 C1QL3Q5VWW1 255 aa5.38□□□□□ -1.55
CYLD-216ENST00000569891 RAB12Q6IQ22 244 aa5.38□□□□□ -1.55
CYLD-216ENST00000569891 LRFN4Q6PJG9 635 aa5.38□□□□□ -1.55
CYLD-216ENST00000569891 PLET1Q6UQ28 207 aa5.38□□□□□ -1.55
CYLD-216ENST00000569891 UNQ9370/PRO34162Q6UXP9 181 aa5.38□□□□□ -1.55
CYLD-216ENST00000569891 FCRLAQ7L513 359 aa5.38□□□□□ -1.55
CYLD-216ENST00000569891 DCXRQ7Z4W1 244 aa5.38□□□□□ -1.55
CYLD-216ENST00000569891 CCDC36Q8IYA8 594 aa5.38□□□□□ -1.55
CYLD-216ENST00000569891 CENPSQ8N2Z9 138 aa5.38□□□□□ -1.55
CYLD-216ENST00000569891 SAMD12Q8N8I0 201 aa5.38□□□□□ -1.55
CYLD-216ENST00000569891 FAM83FQ8NEG4 500 aaPredicted RBP5.38□□□□□ -1.55
CYLD-216ENST00000569891 TMEM45BQ96B21 275 aa5.38□□□□□ -1.55
CYLD-216ENST00000569891 SARAFQ96BY9 339 aa5.38□□□□□ -1.55
CYLD-216ENST00000569891 SLAMF6Q96DU3 332 aa5.38□□□□□ -1.55
CYLD-216ENST00000569891 GNRHR2Q96P88 292 aa5.38□□□□□ -1.55
CYLD-216ENST00000569891 RGCCQ9H4X1 137 aa5.38□□□□□ -1.55
CYLD-216ENST00000569891 AKIRIN1Q9H9L7 192 aaPredicted RBP5.38□□□□□ -1.55
CYLD-216ENST00000569891 ABCB9Q9NP78 766 aa5.38□□□□□ -1.55
CYLD-216ENST00000569891 FAIMQ9NVQ4 179 aa5.38□□□□□ -1.55
CYLD-216ENST00000569891 NOSIPQ9Y314 301 aaKnown RBP5.38□□□□□ -1.55
CYLD-216ENST00000569891 LOC101059948A0A1B0GTJ6 334 aa5.38□□□□□ -1.55
CYLD-216ENST00000569891 ARGFXA6NJG6 315 aa5.38□□□□□ -1.55
CYLD-216ENST00000569891 TFECO14948 347 aaPredicted RBP5.38□□□□□ -1.55
CYLD-216ENST00000569891 SYT7O43581 403 aa5.38□□□□□ -1.55
CYLD-216ENST00000569891 NME2P1O60361 137 aa5.38□□□□□ -1.55
CYLD-216ENST00000569891 UBL3O95164 117 aa5.38□□□□□ -1.55
CYLD-216ENST00000569891 UBBP0CG47 229 aa5.38□□□□□ -1.55
CYLD-216ENST00000569891 CTLA4P16410 223 aa5.38□□□□□ -1.55
CYLD-216ENST00000569891 NME2P22392 152 aa5.38□□□□□ -1.55
CYLD-216ENST00000569891 CD96P40200 585 aa5.38□□□□□ -1.55
CYLD-216ENST00000569891 MMP16P51512 607 aa5.38□□□□□ -1.55
CYLD-216ENST00000569891 PSMA6P60900 246 aaKnown RBP5.38□□□□□ -1.55
CYLD-216ENST00000569891 PPIAP62937 165 aaKnown RBP5.38□□□□□ -1.55
CYLD-216ENST00000569891 SLC36A2Q495M3 483 aa5.38□□□□□ -1.55
CYLD-216ENST00000569891 ZNF766Q5HY98 468 aa5.38□□□□□ -1.55
CYLD-216ENST00000569891 DESI1Q6ICB0 168 aa5.38□□□□□ -1.55
CYLD-216ENST00000569891 B3GLCTQ6Y288 498 aa5.38□□□□□ -1.55
CYLD-216ENST00000569891 DOK3Q7L591 496 aa5.38□□□□□ -1.55
CYLD-216ENST00000569891 TMPRSS7Q7RTY8 843 aa5.38□□□□□ -1.55
CYLD-216ENST00000569891 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.38□□□□□ -1.55
CYLD-216ENST00000569891 SHISA5Q8N114 240 aa5.38□□□□□ -1.55
CYLD-216ENST00000569891 MFSD4AQ8N468 514 aa5.38□□□□□ -1.55
CYLD-216ENST00000569891 FTMTQ8N4E7 242 aa5.38□□□□□ -1.55
CYLD-216ENST00000569891 OR52H1Q8NGJ2 320 aa5.38□□□□□ -1.55
CYLD-216ENST00000569891 RNF133Q8WVZ7 376 aa5.38□□□□□ -1.55
CYLD-216ENST00000569891 RFT1Q96AA3 541 aa5.38□□□□□ -1.55
CYLD-216ENST00000569891 PGAM5Q96HS1 289 aa5.38□□□□□ -1.55
CYLD-216ENST00000569891 OPA3Q9H6K4 179 aa5.38□□□□□ -1.55
CYLD-216ENST00000569891 ACKR4Q9NPB9 350 aa5.38□□□□□ -1.55
CYLD-216ENST00000569891 ATPIF1Q9UII2 106 aa5.38□□□□□ -1.55
CYLD-216ENST00000569891 ZNF175Q9Y473 711 aa5.38□□□□□ -1.55
CYLD-216ENST00000569891 ZDBF2Q9HCK1 2354 aa5.38□□□□□ -1.55
CYLD-216ENST00000569891 PGA4P0DJD7 388 aa5.38□□□□□ -1.55
CYLD-216ENST00000569891 PGA3P0DJD8 388 aa5.38□□□□□ -1.55
CYLD-216ENST00000569891 HOXC12P31275 282 aa5.38□□□□□ -1.55
CYLD-216ENST00000569891 MNDAP41218 407 aa5.38□□□□□ -1.55
CYLD-216ENST00000569891 CDC20Q12834 499 aa5.38□□□□□ -1.55
CYLD-216ENST00000569891 RIN1Q13671 783 aa5.38□□□□□ -1.55
CYLD-216ENST00000569891 RTL6Q6ICC9 239 aa5.38□□□□□ -1.55
CYLD-216ENST00000569891 SLC25A47Q6Q0C1 308 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms