RNA–Protein interactions for RNA: ENST00000565324.5

SMG1-211, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 12,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-211ENST00000565324 OR8B8Q15620 311 aa4.69□□□□□ -1.66
SMG1-211ENST00000565324 GGNBP1Q5YKI7 109 aa4.69□□□□□ -1.66
SMG1-211ENST00000565324 TMEM184AQ6ZMB5 413 aa4.69□□□□□ -1.66
SMG1-211ENST00000565324 OR14A16Q8NHC5 309 aa4.69□□□□□ -1.66
SMG1-211ENST00000565324 SLC38A5Q8WUX1 472 aa4.69□□□□□ -1.66
SMG1-211ENST00000565324 RPL3LQ92901 407 aaKnown RBP4.69□□□□□ -1.66
SMG1-211ENST00000565324 OR10C1Q96KK4 312 aa4.69□□□□□ -1.66
SMG1-211ENST00000565324 SLC35B3Q9H1N7 401 aa4.69□□□□□ -1.66
SMG1-211ENST00000565324 SFXN1Q9H9B4 322 aa4.69□□□□□ -1.66
SMG1-211ENST00000565324 TCRBV21S2A2A0A5A6 115 aa4.69□□□□□ -1.66
SMG1-211ENST00000565324 FAM171A2A8MVW0 826 aa4.69□□□□□ -1.66
SMG1-211ENST00000565324 GPR75O95800 540 aa4.69□□□□□ -1.66
SMG1-211ENST00000565324 FABP4P15090 132 aa4.69□□□□□ -1.66
SMG1-211ENST00000565324 GPR12P47775 334 aa4.69□□□□□ -1.66
SMG1-211ENST00000565324 RRADP55042 308 aa4.69□□□□□ -1.66
SMG1-211ENST00000565324 CLLU1Q5K131 121 aa4.69□□□□□ -1.66
SMG1-211ENST00000565324 GDPD3Q7L5L3 318 aa4.69□□□□□ -1.66
SMG1-211ENST00000565324 NALCNQ8IZF0 1738 aa4.69□□□□□ -1.66
SMG1-211ENST00000565324 LMNTD1Q8N9Z9 388 aa4.69□□□□□ -1.66
SMG1-211ENST00000565324 NEIL2Q969S2 332 aa4.69□□□□□ -1.66
SMG1-211ENST00000565324 A0A087X0M5 115 aa4.69□□□□□ -1.66
SMG1-211ENST00000565324 A0A1B0GX30 115 aa4.69□□□□□ -1.66
SMG1-211ENST00000565324 UNCXA6NJT0 531 aa4.69□□□□□ -1.66
SMG1-211ENST00000565324 FZD6O60353 706 aa4.69□□□□□ -1.66
SMG1-211ENST00000565324 CSO75390 466 aaKnown RBP4.69□□□□□ -1.66
SMG1-211ENST00000565324 NPY4RP50391 375 aa4.69□□□□□ -1.66
SMG1-211ENST00000565324 RAG2P55895 527 aa4.69□□□□□ -1.66
SMG1-211ENST00000565324 TEAD2Q15562 447 aa4.69□□□□□ -1.66
SMG1-211ENST00000565324 RANBP10Q6VN20 620 aa4.69□□□□□ -1.66
SMG1-211ENST00000565324 DOK3Q7L591 496 aa4.69□□□□□ -1.66
SMG1-211ENST00000565324 OR2T6Q8NHC8 308 aa4.69□□□□□ -1.66
SMG1-211ENST00000565324 COPS9Q8WXC6 57 aa4.69□□□□□ -1.66
SMG1-211ENST00000565324 DNAJA3Q96EY1 480 aa4.69□□□□□ -1.66
SMG1-211ENST00000565324 WDR83Q9BRX9 315 aaKnown RBP4.69□□□□□ -1.66
SMG1-211ENST00000565324 SYT17Q9BSW7 474 aa4.69□□□□□ -1.66
SMG1-211ENST00000565324 MENTQ9BUN1 341 aa4.69□□□□□ -1.66
SMG1-211ENST00000565324 ZNF768Q9H5H4 540 aaKnown RBP4.69□□□□□ -1.66
SMG1-211ENST00000565324 GNB4Q9HAV0 340 aa4.69□□□□□ -1.66
SMG1-211ENST00000565324 M0R1X1 148 aa4.69□□□□□ -1.66
SMG1-211ENST00000565324 SEMA4FO95754 770 aa4.69□□□□□ -1.66
SMG1-211ENST00000565324 WNT11O96014 354 aa4.69□□□□□ -1.66
SMG1-211ENST00000565324 SFTA3P0C7M3 94 aa4.69□□□□□ -1.66
SMG1-211ENST00000565324 CD46P15529 392 aa4.69□□□□□ -1.66
SMG1-211ENST00000565324 SDHAP31040 664 aa4.69□□□□□ -1.66
SMG1-211ENST00000565324 EVX1P49640 407 aa4.69□□□□□ -1.66
SMG1-211ENST00000565324 CLDN20P56880 219 aa4.69□□□□□ -1.66
SMG1-211ENST00000565324 PPP2CAP67775 309 aa4.69□□□□□ -1.66
SMG1-211ENST00000565324 NHLH1Q02575 133 aa4.69□□□□□ -1.66
SMG1-211ENST00000565324 NHLH2Q02577 135 aa4.69□□□□□ -1.66
SMG1-211ENST00000565324 PMS2P11Q13670 270 aa4.69□□□□□ -1.66
SMG1-211ENST00000565324 ZNF528Q3MIS6 628 aa4.69□□□□□ -1.66
SMG1-211ENST00000565324 PLAC9Q5JTB6 97 aa4.69□□□□□ -1.66
SMG1-211ENST00000565324 TMEM88Q6PEY1 159 aa4.69□□□□□ -1.66
SMG1-211ENST00000565324 SLC39A11Q8N1S5 342 aa4.69□□□□□ -1.66
SMG1-211ENST00000565324 FAM26EQ8N5C1 309 aa4.69□□□□□ -1.66
SMG1-211ENST00000565324 TMEM104Q8NE00 496 aa4.69□□□□□ -1.66
SMG1-211ENST00000565324 RPUSD4Q96CM3 377 aaKnown RBP4.69□□□□□ -1.66
SMG1-211ENST00000565324 MACROD1Q9BQ69 325 aa4.69□□□□□ -1.66
SMG1-211ENST00000565324 AAMDCQ9H7C9 122 aa4.69□□□□□ -1.66
SMG1-211ENST00000565324 MED16Q9Y2X0 877 aa4.69□□□□□ -1.66
SMG1-211ENST00000565324 NWD2Q9ULI1 1742 aa4.69□□□□□ -1.66
SMG1-211ENST00000565324 GABRR3A8MPY1 467 aa4.69□□□□□ -1.66
SMG1-211ENST00000565324 EN2P19622 333 aaPredicted RBP4.69□□□□□ -1.66
SMG1-211ENST00000565324 ITGB7P26010 798 aa4.69□□□□□ -1.66
SMG1-211ENST00000565324 NTSR1P30989 418 aa4.69□□□□□ -1.66
SMG1-211ENST00000565324 P2RX3P56373 397 aa4.69□□□□□ -1.66
SMG1-211ENST00000565324 IHHQ14623 411 aa4.69□□□□□ -1.66
SMG1-211ENST00000565324 ZNF429Q86V71 674 aa4.69□□□□□ -1.66
SMG1-211ENST00000565324 ST8SIA2Q92186 375 aa4.69□□□□□ -1.66
SMG1-211ENST00000565324 BOD1Q96IK1 185 aa4.69□□□□□ -1.66
SMG1-211ENST00000565324 ZNF778Q96MU6 729 aa4.69□□□□□ -1.66
SMG1-211ENST00000565324 IKZF5Q9H5V7 419 aa4.69□□□□□ -1.66
SMG1-211ENST00000565324 HEATR5BQ9P2D3 2071 aa4.69□□□□□ -1.66
SMG1-211ENST00000565324 ACOD1A6NK06 481 aa4.69□□□□□ -1.66
SMG1-211ENST00000565324 PLSCR1O15162 318 aa4.69□□□□□ -1.66
SMG1-211ENST00000565324 SOD1P00441 154 aa4.69□□□□□ -1.66
SMG1-211ENST00000565324 GNG4P50150 75 aa4.69□□□□□ -1.66
SMG1-211ENST00000565324 VASPP50552 380 aaPredicted RBP4.69□□□□□ -1.66
SMG1-211ENST00000565324 LGALS4P56470 323 aa4.69□□□□□ -1.66
SMG1-211ENST00000565324 RPS23P62266 143 aaKnown RBP4.69□□□□□ -1.66
SMG1-211ENST00000565324 Q3ZCU0 254 aa4.69□□□□□ -1.66
SMG1-211ENST00000565324 ZNF787Q6DD87 383 aa4.69□□□□□ -1.66
SMG1-211ENST00000565324 AMIGO3Q86WK7 504 aa4.69□□□□□ -1.66
SMG1-211ENST00000565324 VRK3Q8IV63 474 aa4.69□□□□□ -1.66
SMG1-211ENST00000565324 UBTD2Q8WUN7 234 aa4.69□□□□□ -1.66
SMG1-211ENST00000565324 SCAMP4Q969E2 229 aa4.69□□□□□ -1.66
SMG1-211ENST00000565324 S1PR3Q99500 378 aa4.69□□□□□ -1.66
SMG1-211ENST00000565324 CXXC1Q9P0U4 656 aaPredicted RBP4.69□□□□□ -1.66
SMG1-211ENST00000565324 SOD2P04179 222 aa4.69□□□□□ -1.66
SMG1-211ENST00000565324 PKIAP61925 76 aa4.69□□□□□ -1.66
SMG1-211ENST00000565324 CLDN10P78369 228 aa4.69□□□□□ -1.66
SMG1-211ENST00000565324 STUMQ69YW2 141 aa4.69□□□□□ -1.66
SMG1-211ENST00000565324 GALNT16Q8N428 558 aa4.69□□□□□ -1.66
SMG1-211ENST00000565324 FLVCR2Q9UPI3 526 aa4.69□□□□□ -1.66
SMG1-211ENST00000565324 COL14A1Q05707 1796 aaKnown RBP4.69□□□□□ -1.66
SMG1-211ENST00000565324 ZNF320A2RRD8 509 aa4.69□□□□□ -1.66
SMG1-211ENST00000565324 LEFTY2O00292 366 aa4.69□□□□□ -1.66
SMG1-211ENST00000565324 C1orf105O95561 183 aa4.69□□□□□ -1.66
SMG1-211ENST00000565324 ELNP15502 786 aa4.69□□□□□ -1.66
SMG1-211ENST00000565324 PMCHP20382 165 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms