RNA–Protein interactions for RNA: ENST00000563366.5

UBFD1-202, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 3

Gene UBFD1, Length 709 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-202ENST00000563366 FCGR2AP12318 317 aa8.61□□□□□ -1.03
UBFD1-202ENST00000563366 CFL1P23528 166 aaKnown RBP8.61□□□□□ -1.03
UBFD1-202ENST00000563366 MAPK3P27361 379 aaPredicted RBP8.61□□□□□ -1.03
UBFD1-202ENST00000563366 CD79BP40259 229 aa8.61□□□□□ -1.03
UBFD1-202ENST00000563366 EIF2S3P41091 472 aaKnown RBP8.61□□□□□ -1.03
UBFD1-202ENST00000563366 GDI2P50395 445 aaKnown RBP8.61□□□□□ -1.03
UBFD1-202ENST00000563366 LHX2P50458 406 aa8.61□□□□□ -1.03
UBFD1-202ENST00000563366 ZNF84P51523 738 aa8.61□□□□□ -1.03
UBFD1-202ENST00000563366 ZNF133P52736 654 aaPredicted RBP8.61□□□□□ -1.03
UBFD1-202ENST00000563366 SUCLG1P53597 346 aaKnown RBP8.61□□□□□ -1.03
UBFD1-202ENST00000563366 CLDN15P56746 228 aa8.61□□□□□ -1.03
UBFD1-202ENST00000563366 RPS25P62851 125 aaKnown RBP8.61□□□□□ -1.03
UBFD1-202ENST00000563366 ROM1Q03395 351 aa8.61□□□□□ -1.03
UBFD1-202ENST00000563366 RASGEF1BQ0VAM2 473 aa8.61□□□□□ -1.03
UBFD1-202ENST00000563366 SRSF6Q13247 344 aaKnown RBP8.61□□□□□ -1.03
UBFD1-202ENST00000563366 RNPS1Q15287 305 aaKnown RBP8.61□□□□□ -1.03
UBFD1-202ENST00000563366 INAQ16352 499 aa8.61□□□□□ -1.03
UBFD1-202ENST00000563366 PCK2Q16822 640 aa8.61□□□□□ -1.03
UBFD1-202ENST00000563366 ZNF404Q494X3 552 aa8.61□□□□□ -1.03
UBFD1-202ENST00000563366 TP53I3Q53FA7 332 aa8.61□□□□□ -1.03
UBFD1-202ENST00000563366 C10orf128Q5T292 105 aa8.61□□□□□ -1.03
UBFD1-202ENST00000563366 ZNF684Q5T5D7 378 aa8.61□□□□□ -1.03
UBFD1-202ENST00000563366 DMKNQ6E0U4 476 aaPredicted RBP8.61□□□□□ -1.03
UBFD1-202ENST00000563366 ARL9Q6T311 187 aa8.61□□□□□ -1.03
UBFD1-202ENST00000563366 TRILQ7L0X0 811 aa8.61□□□□□ -1.03
UBFD1-202ENST00000563366 FCRLAQ7L513 359 aa8.61□□□□□ -1.03
UBFD1-202ENST00000563366 SSX6Q7RTT6 188 aa8.61□□□□□ -1.03
UBFD1-202ENST00000563366 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.61□□□□□ -1.03
UBFD1-202ENST00000563366 ZNF679Q8IYX0 411 aa8.61□□□□□ -1.03
UBFD1-202ENST00000563366 YIPF7Q8N8F6 280 aa8.61□□□□□ -1.03
UBFD1-202ENST00000563366 OR52N5Q8NH56 324 aa8.61□□□□□ -1.03
UBFD1-202ENST00000563366 MCFD2Q8NI22 146 aa8.61□□□□□ -1.03
UBFD1-202ENST00000563366 THEM6Q8WUY1 208 aa8.61□□□□□ -1.03
UBFD1-202ENST00000563366 S100ZQ8WXG8 99 aa8.61□□□□□ -1.03
UBFD1-202ENST00000563366 AP3S1Q92572 193 aa8.61□□□□□ -1.03
UBFD1-202ENST00000563366 RELTQ969Z4 430 aa8.61□□□□□ -1.03
UBFD1-202ENST00000563366 DACH2Q96NX9 599 aa8.61□□□□□ -1.03
UBFD1-202ENST00000563366 OR2M2Q96R28 347 aa8.61□□□□□ -1.03
UBFD1-202ENST00000563366 TMED9Q9BVK6 235 aa8.61□□□□□ -1.03
UBFD1-202ENST00000563366 SRXN1Q9BYN0 137 aa8.61□□□□□ -1.03
UBFD1-202ENST00000563366 COMMD4Q9H0A8 199 aa8.61□□□□□ -1.03
UBFD1-202ENST00000563366 MMP27Q9H306 513 aa8.61□□□□□ -1.03
UBFD1-202ENST00000563366 EXO5Q9H790 373 aa8.61□□□□□ -1.03
UBFD1-202ENST00000563366 RNF122Q9H9V4 155 aa8.61□□□□□ -1.03
UBFD1-202ENST00000563366 GP6Q9HCN6 339 aa8.61□□□□□ -1.03
UBFD1-202ENST00000563366 PARPBPQ9NWS1 579 aa8.61□□□□□ -1.03
UBFD1-202ENST00000563366 GALNT8Q9NY28 637 aa8.61□□□□□ -1.03
UBFD1-202ENST00000563366 GLTPQ9NZD2 209 aa8.61□□□□□ -1.03
UBFD1-202ENST00000563366 IKZF2Q9UKS7 526 aa8.61□□□□□ -1.03
UBFD1-202ENST00000563366 COPS3Q9UNS2 423 aa8.61□□□□□ -1.03
UBFD1-202ENST00000563366 IGKV3D-15A0A087WSY6 115 aa8.6□□□□□ -1.03
UBFD1-202ENST00000563366 A0A1W2PPL8 197 aa8.6□□□□□ -1.03
UBFD1-202ENST00000563366 TMEM212A6NML5 194 aa8.6□□□□□ -1.03
UBFD1-202ENST00000563366 ZNF716A6NP11 495 aa8.6□□□□□ -1.03
UBFD1-202ENST00000563366 ZNF879B4DU55 563 aa8.6□□□□□ -1.03
UBFD1-202ENST00000563366 MKRN2OSH3BPM6 223 aa8.6□□□□□ -1.03
UBFD1-202ENST00000563366 GABRPO00591 440 aa8.6□□□□□ -1.03
UBFD1-202ENST00000563366 CPN1P15169 458 aa8.6□□□□□ -1.03
UBFD1-202ENST00000563366 PAX7P23759 505 aa8.6□□□□□ -1.03
UBFD1-202ENST00000563366 EDNRAP25101 427 aa8.6□□□□□ -1.03
UBFD1-202ENST00000563366 S100A5P33763 92 aa8.6□□□□□ -1.03
UBFD1-202ENST00000563366 RFC3P40938 356 aa8.6□□□□□ -1.03
UBFD1-202ENST00000563366 GATA4P43694 442 aa8.6□□□□□ -1.03
UBFD1-202ENST00000563366 RORCP51449 518 aa8.6□□□□□ -1.03
UBFD1-202ENST00000563366 RIDAP52758 137 aaKnown RBP8.6□□□□□ -1.03
UBFD1-202ENST00000563366 UCNP55089 124 aa8.6□□□□□ -1.03
UBFD1-202ENST00000563366 CLDN18P56856 261 aa8.6□□□□□ -1.03
UBFD1-202ENST00000563366 LSM6P62312 80 aaKnown RBP8.6□□□□□ -1.03
UBFD1-202ENST00000563366 ROR2Q01974 943 aaKnown RBP8.6□□□□□ -1.03
UBFD1-202ENST00000563366 FMODQ06828 376 aa8.6□□□□□ -1.03
UBFD1-202ENST00000563366 EIF2B1Q14232 305 aaKnown RBP8.6□□□□□ -1.03
UBFD1-202ENST00000563366 STK11Q15831 433 aa8.6□□□□□ -1.03
UBFD1-202ENST00000563366 KCNMB1Q16558 191 aa8.6□□□□□ -1.03
UBFD1-202ENST00000563366 MOGQ16653 247 aa8.6□□□□□ -1.03
UBFD1-202ENST00000563366 YIF1BQ5BJH7 314 aa8.6□□□□□ -1.03
UBFD1-202ENST00000563366 RIPPLY2Q5TAB7 128 aa8.6□□□□□ -1.03
UBFD1-202ENST00000563366 SLC25A47Q6Q0C1 308 aa8.6□□□□□ -1.03
UBFD1-202ENST00000563366 KRT77Q7Z794 578 aa8.6□□□□□ -1.03
UBFD1-202ENST00000563366 CROCCP3Q8IVE0 287 aa8.6□□□□□ -1.03
UBFD1-202ENST00000563366 TMEM123Q8N131 208 aa8.6□□□□□ -1.03
UBFD1-202ENST00000563366 RFLNBQ8N5W9 214 aa8.6□□□□□ -1.03
UBFD1-202ENST00000563366 ZFP41Q8N8Y5 198 aa8.6□□□□□ -1.03
UBFD1-202ENST00000563366 OR2AJ1Q8NGZ0 328 aa8.6□□□□□ -1.03
UBFD1-202ENST00000563366 RPS4Y2Q8TD47 263 aa8.6□□□□□ -1.03
UBFD1-202ENST00000563366 RNF128Q8TEB7 428 aa8.6□□□□□ -1.03
UBFD1-202ENST00000563366 TMEM54Q969K7 222 aa8.6□□□□□ -1.03
UBFD1-202ENST00000563366 TMEM203Q969S6 136 aa8.6□□□□□ -1.03
UBFD1-202ENST00000563366 MCHR2Q969V1 340 aa8.6□□□□□ -1.03
UBFD1-202ENST00000563366 TMEM45BQ96B21 275 aa8.6□□□□□ -1.03
UBFD1-202ENST00000563366 OR8B4Q96RC9 309 aa8.6□□□□□ -1.03
UBFD1-202ENST00000563366 PRRG4Q9BZD6 226 aa8.6□□□□□ -1.03
UBFD1-202ENST00000563366 SLIRPQ9GZT3 109 aaKnown RBP8.6□□□□□ -1.03
UBFD1-202ENST00000563366 SLC6A15Q9H2J7 730 aa8.6□□□□□ -1.03
UBFD1-202ENST00000563366 NIPAL2Q9H841 368 aa8.6□□□□□ -1.03
UBFD1-202ENST00000563366 HMG20AQ9NP66 347 aa8.6□□□□□ -1.03
UBFD1-202ENST00000563366 ACOXLQ9NUZ1 547 aa8.6□□□□□ -1.03
UBFD1-202ENST00000563366 MRPL22Q9NWU5 206 aaKnown RBP8.6□□□□□ -1.03
UBFD1-202ENST00000563366 CRNNQ9UBG3 495 aaPredicted RBP8.6□□□□□ -1.03
UBFD1-202ENST00000563366 ST6GALNAC2Q9UJ37 374 aa8.6□□□□□ -1.03
UBFD1-202ENST00000563366 POLR1DQ9Y2S0 133 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms