RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 RIIAD1A6NNX1 92 aa13.59□□□□□ -0.23
USB1-208ENST00000563207 CRLF1O75462 422 aa13.59□□□□□ -0.23
USB1-208ENST00000563207 KHDRBS3O75525 346 aaKnown RBP13.59□□□□□ -0.23
USB1-208ENST00000563207 SLC2A10O95528 541 aa13.59□□□□□ -0.23
USB1-208ENST00000563207 ALPLP05186 524 aa13.59□□□□□ -0.23
USB1-208ENST00000563207 ANPEPP15144 967 aa13.59□□□□□ -0.23
USB1-208ENST00000563207 ZNF3P17036 446 aa13.59□□□□□ -0.23
USB1-208ENST00000563207 PTAFRP25105 342 aa13.59□□□□□ -0.23
USB1-208ENST00000563207 RAD23AP54725 363 aa13.59□□□□□ -0.23
USB1-208ENST00000563207 FMODQ06828 376 aa13.59□□□□□ -0.23
USB1-208ENST00000563207 DAG1Q14118 895 aa13.59□□□□□ -0.23
USB1-208ENST00000563207 GINS1Q14691 196 aa13.59□□□□□ -0.23
USB1-208ENST00000563207 RCN1Q15293 331 aa13.59□□□□□ -0.23
USB1-208ENST00000563207 ZBTB49Q6ZSB9 765 aa13.59□□□□□ -0.23
USB1-208ENST00000563207 FOXL2NBQ6ZUU3 175 aa13.59□□□□□ -0.23
USB1-208ENST00000563207 NPEPL1Q8NDH3 523 aa13.59□□□□□ -0.23
USB1-208ENST00000563207 OR52E2Q8NGJ4 325 aa13.59□□□□□ -0.23
USB1-208ENST00000563207 OR4Q3Q8NH05 313 aa13.59□□□□□ -0.23
USB1-208ENST00000563207 EME1Q96AY2 570 aa13.59□□□□□ -0.23
USB1-208ENST00000563207 NMNAT3Q96T66 252 aa13.59□□□□□ -0.23
USB1-208ENST00000563207 SYT4Q9H2B2 425 aa13.59□□□□□ -0.23
USB1-208ENST00000563207 KCNN2Q9H2S1 579 aa13.59□□□□□ -0.23
USB1-208ENST00000563207 FKBP7Q9Y680 259 aa13.59□□□□□ -0.23
USB1-208ENST00000563207 PLCE1Q9P212 2302 aa13.59□□□□□ -0.23
USB1-208ENST00000563207 SONP18583 2426 aaKnown RBP13.58□□□□□ -0.24
USB1-208ENST00000563207 A0A096LPE4 126 aa13.58□□□□□ -0.24
USB1-208ENST00000563207 A0A1W2PPZ6 126 aa13.58□□□□□ -0.24
USB1-208ENST00000563207 ATP6V1G2-DDX39BF2Z307 99 aa13.58□□□□□ -0.24
USB1-208ENST00000563207 H0YHG0 523 aa13.58□□□□□ -0.24
USB1-208ENST00000563207 H7C1C5 153 aa13.58□□□□□ -0.24
USB1-208ENST00000563207 RRP9O43818 475 aaKnown RBP13.58□□□□□ -0.24
USB1-208ENST00000563207 SLC16A7O60669 478 aa13.58□□□□□ -0.24
USB1-208ENST00000563207 UBL3O95164 117 aa13.58□□□□□ -0.24
USB1-208ENST00000563207 B4GALT1P15291 398 aa13.58□□□□□ -0.24
USB1-208ENST00000563207 FABP6P51161 128 aa13.58□□□□□ -0.24
USB1-208ENST00000563207 LCN6P62502 163 aa13.58□□□□□ -0.24
USB1-208ENST00000563207 TUBA1BP68363 451 aa13.58□□□□□ -0.24
USB1-208ENST00000563207 TUBA4AP68366 448 aa13.58□□□□□ -0.24
USB1-208ENST00000563207 NPRL3Q12980 569 aa13.58□□□□□ -0.24
USB1-208ENST00000563207 PTGES3Q15185 160 aaKnown RBP13.58□□□□□ -0.24
USB1-208ENST00000563207 ZNF362Q5T0B9 420 aaPredicted RBP13.58□□□□□ -0.24
USB1-208ENST00000563207 SLC35F1Q5T1Q4 408 aa13.58□□□□□ -0.24
USB1-208ENST00000563207 AGAP6Q5VW22 663 aa13.58□□□□□ -0.24
USB1-208ENST00000563207 TUBA1AQ71U36 451 aa13.58□□□□□ -0.24
USB1-208ENST00000563207 ZBTB46Q86UZ6 589 aa13.58□□□□□ -0.24
USB1-208ENST00000563207 GLB1L2Q8IW92 636 aa13.58□□□□□ -0.24
USB1-208ENST00000563207 MUC15Q8N387 334 aa13.58□□□□□ -0.24
USB1-208ENST00000563207 CBR4Q8N4T8 237 aa13.58□□□□□ -0.24
USB1-208ENST00000563207 ZNF525Q8N782 197 aa13.58□□□□□ -0.24
USB1-208ENST00000563207 SDR9C7Q8NEX9 313 aa13.58□□□□□ -0.24
USB1-208ENST00000563207 NSMAFQ92636 917 aa13.58□□□□□ -0.24
USB1-208ENST00000563207 SLC38A2Q96QD8 506 aa13.58□□□□□ -0.24
USB1-208ENST00000563207 DDOQ99489 341 aa13.58□□□□□ -0.24
USB1-208ENST00000563207 GABARAPL3Q9BY60 117 aa13.58□□□□□ -0.24
USB1-208ENST00000563207 GRIP2Q9C0E4 1043 aa13.58□□□□□ -0.24
USB1-208ENST00000563207 NUAK2Q9H093 628 aa13.58□□□□□ -0.24
USB1-208ENST00000563207 RACGAP1Q9H0H5 632 aa13.58□□□□□ -0.24
USB1-208ENST00000563207 SEC61A2Q9H9S3 476 aa13.58□□□□□ -0.24
USB1-208ENST00000563207 CBLN4Q9NTU7 201 aa13.58□□□□□ -0.24
USB1-208ENST00000563207 FBXL3Q9UKT7 428 aa13.58□□□□□ -0.24
USB1-208ENST00000563207 MOKQ9UQ07 419 aa13.58□□□□□ -0.24
USB1-208ENST00000563207 UGT2A1Q9Y4X1 527 aa13.58□□□□□ -0.24
USB1-208ENST00000563207 ATP23Q9Y6H3 246 aa13.58□□□□□ -0.24
USB1-208ENST00000563207 ABCA1O95477 2261 aa13.57□□□□□ -0.24
USB1-208ENST00000563207 IGKV1D-43A0A0B4J1Z2 117 aa13.57□□□□□ -0.24
USB1-208ENST00000563207 OR6C68A6NDL8 312 aa13.57□□□□□ -0.24
USB1-208ENST00000563207 EI24O14681 340 aa13.57□□□□□ -0.24
USB1-208ENST00000563207 CTLA4P16410 223 aa13.57□□□□□ -0.24
USB1-208ENST00000563207 PAICSP22234 425 aaKnown RBP13.57□□□□□ -0.24
USB1-208ENST00000563207 LAP3P28838 519 aa13.57□□□□□ -0.24
USB1-208ENST00000563207 ARR3P36575 388 aa13.57□□□□□ -0.24
USB1-208ENST00000563207 CENPAP49450 140 aa13.57□□□□□ -0.24
USB1-208ENST00000563207 SLC25A1P53007 311 aa13.57□□□□□ -0.24
USB1-208ENST00000563207 ETFDHQ16134 617 aa13.57□□□□□ -0.24
USB1-208ENST00000563207 SLC36A2Q495M3 483 aa13.57□□□□□ -0.24
USB1-208ENST00000563207 FAM27BQ5VT28 67 aa13.57□□□□□ -0.24
USB1-208ENST00000563207 ACSM5Q6NUN0 579 aa13.57□□□□□ -0.24
USB1-208ENST00000563207 SLC37A3Q8NCC5 494 aa13.57□□□□□ -0.24
USB1-208ENST00000563207 OR10H5Q8NGA6 315 aa13.57□□□□□ -0.24
USB1-208ENST00000563207 OR2T4Q8NH00 348 aa13.57□□□□□ -0.24
USB1-208ENST00000563207 RADILQ96JH8 1075 aa13.57□□□□□ -0.24
USB1-208ENST00000563207 YAE1D1Q9NRH1 226 aa13.57□□□□□ -0.24
USB1-208ENST00000563207 FAIMQ9NVQ4 179 aa13.57□□□□□ -0.24
USB1-208ENST00000563207 CRNNQ9UBG3 495 aaPredicted RBP13.57□□□□□ -0.24
USB1-208ENST00000563207 B9D1Q9UPM9 204 aa13.57□□□□□ -0.24
USB1-208ENST00000563207 IGHV1-18A0A0C4DH31 117 aa13.56□□□□□ -0.24
USB1-208ENST00000563207 ZAR1LA6NP61 321 aa13.56□□□□□ -0.24
USB1-208ENST00000563207 SURF4O15260 269 aa13.56□□□□□ -0.24
USB1-208ENST00000563207 MITFO75030 526 aaPredicted RBP13.56□□□□□ -0.24
USB1-208ENST00000563207 IGKV3-15P01624 115 aa13.56□□□□□ -0.24
USB1-208ENST00000563207 CST2P09228 141 aa13.56□□□□□ -0.24
USB1-208ENST00000563207 CBR1P16152 277 aa13.56□□□□□ -0.24
USB1-208ENST00000563207 MSR1P21757 451 aa13.56□□□□□ -0.24
USB1-208ENST00000563207 PTDSS1P48651 473 aaKnown RBP13.56□□□□□ -0.24
USB1-208ENST00000563207 BLVRAP53004 296 aa13.56□□□□□ -0.24
USB1-208ENST00000563207 NUDT6P53370 316 aa13.56□□□□□ -0.24
USB1-208ENST00000563207 PCBD1P61457 104 aa13.56□□□□□ -0.24
USB1-208ENST00000563207 LSM6P62312 80 aaKnown RBP13.56□□□□□ -0.24
USB1-208ENST00000563207 GLO1Q04760 184 aa13.56□□□□□ -0.24
USB1-208ENST00000563207 MST1LQ2TV78 715 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms