RNA–Protein interactions for RNA: ENST00000562389.5

CLK3-207, Transcript of CDC like kinase 3, humanhuman

TSL 4

Gene CLK3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-207ENST00000562389 ITGB1BP2Q9UKP3 347 aa14.47□□□□□ -0.09
CLK3-207ENST00000562389 TIMM10BQ9Y5J6 103 aa14.47□□□□□ -0.09
CLK3-207ENST00000562389 RIIAD1A6NNX1 92 aa14.46□□□□□ -0.09
CLK3-207ENST00000562389 OVOL3O00110 214 aa14.46□□□□□ -0.09
CLK3-207ENST00000562389 SMPD2O60906 423 aa14.46□□□□□ -0.09
CLK3-207ENST00000562389 SNAP29O95721 258 aa14.46□□□□□ -0.09
CLK3-207ENST00000562389 CD8AP01732 235 aa14.46□□□□□ -0.09
CLK3-207ENST00000562389 PAX1P15863 534 aa14.46□□□□□ -0.09
CLK3-207ENST00000562389 ZNF3P17036 446 aa14.46□□□□□ -0.09
CLK3-207ENST00000562389 NR4A1P22736 598 aa14.46□□□□□ -0.09
CLK3-207ENST00000562389 POU1F1P28069 291 aa14.46□□□□□ -0.09
CLK3-207ENST00000562389 NKX6-1P78426 367 aaPredicted RBP14.46□□□□□ -0.09
CLK3-207ENST00000562389 CDK5Q00535 292 aa14.46□□□□□ -0.09
CLK3-207ENST00000562389 AQP6Q13520 282 aa14.46□□□□□ -0.09
CLK3-207ENST00000562389 CRMP1Q14194 572 aa14.46□□□□□ -0.09
CLK3-207ENST00000562389 TESK1Q15569 626 aa14.46□□□□□ -0.09
CLK3-207ENST00000562389 TBC1D28Q2M2D7 210 aa14.46□□□□□ -0.09
CLK3-207ENST00000562389 KDM4DQ6B0I6 523 aa14.46□□□□□ -0.09
CLK3-207ENST00000562389 LRRC75A-AS1Q8N1F1 130 aa14.46□□□□□ -0.09
CLK3-207ENST00000562389 CYB561A3Q8NBI2 242 aa14.46□□□□□ -0.09
CLK3-207ENST00000562389 CPEB3Q8NE35 698 aaKnown RBP14.46□□□□□ -0.09
CLK3-207ENST00000562389 OR1J2Q8NGS2 313 aa14.46□□□□□ -0.09
CLK3-207ENST00000562389 OR2T4Q8NH00 348 aa14.46□□□□□ -0.09
CLK3-207ENST00000562389 C11orf40Q8WZ69 217 aa14.46□□□□□ -0.09
CLK3-207ENST00000562389 NMNAT2Q9BZQ4 307 aa14.46□□□□□ -0.09
CLK3-207ENST00000562389 WNT5BQ9H1J7 359 aa14.46□□□□□ -0.09
CLK3-207ENST00000562389 SLC25A19Q9HC21 320 aa14.46□□□□□ -0.09
CLK3-207ENST00000562389 CBLN4Q9NTU7 201 aa14.46□□□□□ -0.09
CLK3-207ENST00000562389 MAST4O15021 2626 aa14.45□□□□□ -0.1
CLK3-207ENST00000562389 MPZL1O95297 269 aa14.45□□□□□ -0.1
CLK3-207ENST00000562389 TACC2O95359 2948 aa14.45□□□□□ -0.1
CLK3-207ENST00000562389 GPANK1O95872 356 aa14.45□□□□□ -0.1
CLK3-207ENST00000562389 APEX1P27695 318 aaKnown RBP14.45□□□□□ -0.1
CLK3-207ENST00000562389 APLNRP35414 380 aa14.45□□□□□ -0.1
CLK3-207ENST00000562389 CENPAP49450 140 aa14.45□□□□□ -0.1
CLK3-207ENST00000562389 SLC25A1P53007 311 aa14.45□□□□□ -0.1
CLK3-207ENST00000562389 CRISP1P54107 249 aa14.45□□□□□ -0.1
CLK3-207ENST00000562389 GALK2Q01415 458 aa14.45□□□□□ -0.1
CLK3-207ENST00000562389 SCRN3Q0VDG4 424 aa14.45□□□□□ -0.1
CLK3-207ENST00000562389 SNTB2Q13425 540 aaKnown RBP14.45□□□□□ -0.1
CLK3-207ENST00000562389 DAG1Q14118 895 aa14.45□□□□□ -0.1
CLK3-207ENST00000562389 GINS1Q14691 196 aa14.45□□□□□ -0.1
CLK3-207ENST00000562389 ZSCAN26Q16670 478 aa14.45□□□□□ -0.1
CLK3-207ENST00000562389 C11orf71Q6IPW1 123 aa14.45□□□□□ -0.1
CLK3-207ENST00000562389 KRT80Q6KB66 452 aa14.45□□□□□ -0.1
CLK3-207ENST00000562389 ACSM5Q6NUN0 579 aa14.45□□□□□ -0.1
CLK3-207ENST00000562389 ALDH16A1Q8IZ83 802 aa14.45□□□□□ -0.1
CLK3-207ENST00000562389 SLC26A10Q8NG04 563 aa14.45□□□□□ -0.1
CLK3-207ENST00000562389 AKR7LQ8NHP1 331 aa14.45□□□□□ -0.1
CLK3-207ENST00000562389 PKP2Q99959 881 aa14.45□□□□□ -0.1
CLK3-207ENST00000562389 GSX2Q9BZM3 304 aa14.45□□□□□ -0.1
CLK3-207ENST00000562389 CDH20Q9HBT6 801 aa14.45□□□□□ -0.1
CLK3-207ENST00000562389 KRT84Q9NSB2 600 aa14.45□□□□□ -0.1
CLK3-207ENST00000562389 ZNF701Q9NV72 531 aaPredicted RBP14.45□□□□□ -0.1
CLK3-207ENST00000562389 OAZ3Q9UMX2 235 aa14.45□□□□□ -0.1
CLK3-207ENST00000562389 SPEF1Q9Y4P9 236 aa14.45□□□□□ -0.1
CLK3-207ENST00000562389 PRRC2AP48634 2157 aaKnown RBP14.44□□□□□ -0.1
CLK3-207ENST00000562389 HMGN1P05114 100 aa14.44□□□□□ -0.1
CLK3-207ENST00000562389 COX5BP10606 129 aa14.44□□□□□ -0.1
CLK3-207ENST00000562389 STOMP27105 288 aa14.44□□□□□ -0.1
CLK3-207ENST00000562389 ESRRGP62508 458 aa14.44□□□□□ -0.1
CLK3-207ENST00000562389 TEKQ02763 1124 aa14.44□□□□□ -0.1
CLK3-207ENST00000562389 DBPQ10586 325 aaPredicted RBP14.44□□□□□ -0.1
CLK3-207ENST00000562389 ADIPOQQ15848 244 aa14.44□□□□□ -0.1
CLK3-207ENST00000562389 MEP1BQ16820 701 aa14.44□□□□□ -0.1
CLK3-207ENST00000562389 PAQR4Q8N4S7 273 aaPredicted RBP14.44□□□□□ -0.1
CLK3-207ENST00000562389 ICA1LQ8NDH6 482 aa14.44□□□□□ -0.1
CLK3-207ENST00000562389 PROKR2Q8NFJ6 384 aa14.44□□□□□ -0.1
CLK3-207ENST00000562389 POM121L2Q96KW2 1035 aa14.44□□□□□ -0.1
CLK3-207ENST00000562389 OSBPL10Q9BXB5 764 aa14.44□□□□□ -0.1
CLK3-207ENST00000562389 S100A14Q9HCY8 104 aa14.44□□□□□ -0.1
CLK3-207ENST00000562389 ASH2LQ9UBL3 628 aa14.44□□□□□ -0.1
CLK3-207ENST00000562389 ENOPH1Q9UHY7 261 aa14.44□□□□□ -0.1
CLK3-207ENST00000562389 LRBAP50851 2863 aa14.44□□□□□ -0.1
CLK3-207ENST00000562389 SAC3D1A6NKF1 404 aa14.43□□□□□ -0.1
CLK3-207ENST00000562389 FAM171A2A8MVW0 826 aa14.43□□□□□ -0.1
CLK3-207ENST00000562389 SURF4O15260 269 aa14.43□□□□□ -0.1
CLK3-207ENST00000562389 SGCEO43556 437 aa14.43□□□□□ -0.1
CLK3-207ENST00000562389 DOK2O60496 412 aa14.43□□□□□ -0.1
CLK3-207ENST00000562389 TFP02787 698 aa14.43□□□□□ -0.1
CLK3-207ENST00000562389 CCL2P13500 99 aa14.43□□□□□ -0.1
CLK3-207ENST00000562389 SPI1P17947 270 aa14.43□□□□□ -0.1
CLK3-207ENST00000562389 PCSK6P29122 969 aa14.43□□□□□ -0.1
CLK3-207ENST00000562389 PYCR1P32322 319 aa14.43□□□□□ -0.1
CLK3-207ENST00000562389 THBS4P35443 961 aa14.43□□□□□ -0.1
CLK3-207ENST00000562389 GLRXP35754 106 aa14.43□□□□□ -0.1
CLK3-207ENST00000562389 PTH2RP49190 550 aa14.43□□□□□ -0.1
CLK3-207ENST00000562389 RPS23P62266 143 aaKnown RBP14.43□□□□□ -0.1
CLK3-207ENST00000562389 PPP2R2BQ00005 443 aa14.43□□□□□ -0.1
CLK3-207ENST00000562389 EFNB3Q15768 340 aa14.43□□□□□ -0.1
CLK3-207ENST00000562389 OTPQ5XKR4 325 aa14.43□□□□□ -0.1
CLK3-207ENST00000562389 ZNF774Q6NX45 483 aa14.43□□□□□ -0.1
CLK3-207ENST00000562389 VHLLQ6RSH7 139 aa14.43□□□□□ -0.1
CLK3-207ENST00000562389 OR10H5Q8NGA6 315 aa14.43□□□□□ -0.1
CLK3-207ENST00000562389 OR9Q1Q8NGQ5 310 aa14.43□□□□□ -0.1
CLK3-207ENST00000562389 TEX12Q9BXU0 123 aa14.43□□□□□ -0.1
CLK3-207ENST00000562389 MRPL22Q9NWU5 206 aaKnown RBP14.43□□□□□ -0.1
CLK3-207ENST00000562389 TMEFF2Q9UIK5 374 aaPredicted RBP14.43□□□□□ -0.1
CLK3-207ENST00000562389 KCNG2Q9UJ96 466 aa14.43□□□□□ -0.1
CLK3-207ENST00000562389 NDRG4Q9ULP0 352 aaKnown RBP14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms