RNA–Protein interactions for RNA: ENST00000557311.5

ATXN3-247, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-247ENST00000557311 C2orf88Q9BSF0 95 aa4.3□□□□□ -1.72
ATXN3-247ENST00000557311 EFCAB11Q9BUY7 163 aa4.3□□□□□ -1.72
ATXN3-247ENST00000557311 OSBPL11Q9BXB4 747 aa4.3□□□□□ -1.72
ATXN3-247ENST00000557311 MS4A8Q9BY19 250 aa4.3□□□□□ -1.72
ATXN3-247ENST00000557311 CADM1Q9BY67 442 aaKnown RBP4.3□□□□□ -1.72
ATXN3-247ENST00000557311 ACTR6Q9GZN1 396 aa4.3□□□□□ -1.72
ATXN3-247ENST00000557311 DDX31Q9H8H2 851 aaKnown RBP4.3□□□□□ -1.72
ATXN3-247ENST00000557311 GRHL1Q9NZI5 618 aa4.3□□□□□ -1.72
ATXN3-247ENST00000557311 KLRF1Q9NZS2 232 aa4.3□□□□□ -1.72
ATXN3-247ENST00000557311 MIOXQ9UGB7 285 aa4.3□□□□□ -1.72
ATXN3-247ENST00000557311 KCNE5Q9UJ90 142 aa4.3□□□□□ -1.72
ATXN3-247ENST00000557311 IKZF3Q9UKT9 509 aa4.3□□□□□ -1.72
ATXN3-247ENST00000557311 KCNS2Q9ULS6 477 aa4.3□□□□□ -1.72
ATXN3-247ENST00000557311 SNX12Q9UMY4 172 aa4.3□□□□□ -1.72
ATXN3-247ENST00000557311 ABCG2Q9UNQ0 655 aa4.3□□□□□ -1.72
ATXN3-247ENST00000557311 B3GALT5Q9Y2C3 310 aa4.3□□□□□ -1.72
ATXN3-247ENST00000557311 KCNK7Q9Y2U2 307 aa4.3□□□□□ -1.72
ATXN3-247ENST00000557311 STARD10Q9Y365 291 aa4.3□□□□□ -1.72
ATXN3-247ENST00000557311 GRIP1Q9Y3R0 1128 aa4.3□□□□□ -1.72
ATXN3-247ENST00000557311 OARD1Q9Y530 152 aa4.3□□□□□ -1.72
ATXN3-247ENST00000557311 PUS1Q9Y606 427 aaKnown RBP eCLIP4.3□□□□□ -1.72
ATXN3-247ENST00000557311 ABCA1O95477 2261 aa4.3□□□□□ -1.72
ATXN3-247ENST00000557311 CUBNO60494 3623 aa4.29□□□□□ -1.72
ATXN3-247ENST00000557311 RNF103-CHMP3A0A140T963 221 aa4.29□□□□□ -1.72
ATXN3-247ENST00000557311 A0A1W2PN81 502 aa4.29□□□□□ -1.72
ATXN3-247ENST00000557311 A0A1W2PPQ1 181 aa4.29□□□□□ -1.72
ATXN3-247ENST00000557311 WASHC1A8K0Z3 465 aa4.29□□□□□ -1.72
ATXN3-247ENST00000557311 KRBOX1C9JBD0 128 aa4.29□□□□□ -1.72
ATXN3-247ENST00000557311 E9PI62 339 aa4.29□□□□□ -1.72
ATXN3-247ENST00000557311 H0Y8G0 127 aa4.29□□□□□ -1.72
ATXN3-247ENST00000557311 H0YAE9 185 aa4.29□□□□□ -1.72
ATXN3-247ENST00000557311 M0QZK8 103 aa4.29□□□□□ -1.72
ATXN3-247ENST00000557311 SAP18O00422 153 aaKnown RBP4.29□□□□□ -1.72
ATXN3-247ENST00000557311 SCAMP2O15127 329 aaKnown RBP4.29□□□□□ -1.72
ATXN3-247ENST00000557311 TAPBPO15533 448 aa4.29□□□□□ -1.72
ATXN3-247ENST00000557311 TCF21O43680 179 aa4.29□□□□□ -1.72
ATXN3-247ENST00000557311 UGT2B11O75310 529 aa4.29□□□□□ -1.72
ATXN3-247ENST00000557311 SH3BGRLO75368 114 aa4.29□□□□□ -1.72
ATXN3-247ENST00000557311 PRKRAO75569 313 aaKnown RBP4.29□□□□□ -1.72
ATXN3-247ENST00000557311 STK16O75716 305 aa4.29□□□□□ -1.72
ATXN3-247ENST00000557311 GATBO75879 557 aaKnown RBP4.29□□□□□ -1.72
ATXN3-247ENST00000557311 TTC4O95801 387 aa4.29□□□□□ -1.72
ATXN3-247ENST00000557311 CD8AP01732 235 aa4.29□□□□□ -1.72
ATXN3-247ENST00000557311 HCKP08631 526 aa4.29□□□□□ -1.72
ATXN3-247ENST00000557311 IGHV4-31P0DP07 118 aa4.29□□□□□ -1.72
ATXN3-247ENST00000557311 FCGR2AP12318 317 aa4.29□□□□□ -1.72
ATXN3-247ENST00000557311 CBR1P16152 277 aa4.29□□□□□ -1.72
ATXN3-247ENST00000557311 EGR1P18146 543 aa4.29□□□□□ -1.72
ATXN3-247ENST00000557311 PGAM1P18669 254 aa4.29□□□□□ -1.72
ATXN3-247ENST00000557311 PSMB1P20618 241 aaKnown RBP4.29□□□□□ -1.72
ATXN3-247ENST00000557311 DRD5P21918 477 aa4.29□□□□□ -1.72
ATXN3-247ENST00000557311 USF1P22415 310 aaPredicted RBP4.29□□□□□ -1.72
ATXN3-247ENST00000557311 PAX6P26367 422 aa4.29□□□□□ -1.72
ATXN3-247ENST00000557311 DPP4P27487 766 aa4.29□□□□□ -1.72
ATXN3-247ENST00000557311 GCAP28676 217 aa4.29□□□□□ -1.72
ATXN3-247ENST00000557311 GGT5P36269 586 aa4.29□□□□□ -1.72
ATXN3-247ENST00000557311 CHRNA7P36544 502 aa4.29□□□□□ -1.72
ATXN3-247ENST00000557311 MAGEA3P43357 314 aa4.29□□□□□ -1.72
ATXN3-247ENST00000557311 CDC34P49427 236 aaPredicted RBP4.29□□□□□ -1.72
ATXN3-247ENST00000557311 XKP51811 444 aa4.29□□□□□ -1.72
ATXN3-247ENST00000557311 LUMP51884 338 aaPredicted RBP4.29□□□□□ -1.72
ATXN3-247ENST00000557311 NUDT6P53370 316 aa4.29□□□□□ -1.72
ATXN3-247ENST00000557311 PGGT1BP53609 377 aa4.29□□□□□ -1.72
ATXN3-247ENST00000557311 DSCR4P56555 118 aaPredicted RBP4.29□□□□□ -1.72
ATXN3-247ENST00000557311 CLDN15P56746 228 aa4.29□□□□□ -1.72
ATXN3-247ENST00000557311 B3GALT5-AS1P59052 145 aa4.29□□□□□ -1.72
ATXN3-247ENST00000557311 BLOC1S1P78537 153 aa4.29□□□□□ -1.72
ATXN3-247ENST00000557311 IRF8Q02556 426 aa4.29□□□□□ -1.72
ATXN3-247ENST00000557311 HSF2Q03933 536 aa4.29□□□□□ -1.72
ATXN3-247ENST00000557311 PLCXD2Q0VAA5 305 aa4.29□□□□□ -1.72
ATXN3-247ENST00000557311 MADCAM1Q13477 382 aa4.29□□□□□ -1.72
ATXN3-247ENST00000557311 GPR176Q14439 515 aa4.29□□□□□ -1.72
ATXN3-247ENST00000557311 HNF4GQ14541 408 aa4.29□□□□□ -1.72
ATXN3-247ENST00000557311 TRIP10Q15642 601 aa4.29□□□□□ -1.72
ATXN3-247ENST00000557311 SGCBQ16585 318 aa4.29□□□□□ -1.72
ATXN3-247ENST00000557311 PDK4Q16654 411 aa4.29□□□□□ -1.72
ATXN3-247ENST00000557311 ZNF181Q2M3W8 571 aa4.29□□□□□ -1.72
ATXN3-247ENST00000557311 C18orf21Q32NC0 220 aaPredicted RBP4.29□□□□□ -1.72
ATXN3-247ENST00000557311 SLC36A3Q495N2 470 aa4.29□□□□□ -1.72
ATXN3-247ENST00000557311 ZNF672Q499Z4 452 aaPredicted RBP4.29□□□□□ -1.72
ATXN3-247ENST00000557311 FAM120AOSQ5T036 256 aa4.29□□□□□ -1.72
ATXN3-247ENST00000557311 NCMAPQ5T1S8 102 aa4.29□□□□□ -1.72
ATXN3-247ENST00000557311 KHDRBS2Q5VWX1 349 aaKnown RBP4.29□□□□□ -1.72
ATXN3-247ENST00000557311 ANKRD22Q5VYY1 191 aa4.29□□□□□ -1.72
ATXN3-247ENST00000557311 C18orf63Q68DL7 685 aa4.29□□□□□ -1.72
ATXN3-247ENST00000557311 FAM166AQ6J272 317 aa4.29□□□□□ -1.72
ATXN3-247ENST00000557311 FAM45BPQ6NSW5 357 aa4.29□□□□□ -1.72
ATXN3-247ENST00000557311 SLC27A4Q6P1M0 643 aa4.29□□□□□ -1.72
ATXN3-247ENST00000557311 MED27Q6P2C8 311 aa4.29□□□□□ -1.72
ATXN3-247ENST00000557311 TFAP2EQ6VUC0 442 aa4.29□□□□□ -1.72
ATXN3-247ENST00000557311 AMIGO2Q86SJ2 522 aa4.29□□□□□ -1.72
ATXN3-247ENST00000557311 DTX2Q86UW9 622 aa4.29□□□□□ -1.72
ATXN3-247ENST00000557311 COMMD7Q86VX2 200 aa4.29□□□□□ -1.72
ATXN3-247ENST00000557311 CNTN4Q8IWV2 1026 aa4.29□□□□□ -1.72
ATXN3-247ENST00000557311 LAS2Q8IYD9 372 aa4.29□□□□□ -1.72
ATXN3-247ENST00000557311 UBQLNLQ8IYU4 475 aa4.29□□□□□ -1.72
ATXN3-247ENST00000557311 CENPLQ8N0S6 344 aaPredicted RBP4.29□□□□□ -1.72
ATXN3-247ENST00000557311 STX19Q8N4C7 294 aa4.29□□□□□ -1.72
ATXN3-247ENST00000557311 BANPQ8N9N5 519 aa4.29□□□□□ -1.72
ATXN3-247ENST00000557311 OR5M1Q8NGP8 315 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms