RNA–Protein interactions for RNA: ENST00000556846.1

PCNX1-213, Transcript of pecanex 1, humanhuman

TSL 3

Gene PCNX1, Length 506 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-213ENST00000556846 ARL9Q6T311 187 aa6.14□□□□□ -1.43
PCNX1-213ENST00000556846 VTCN1Q7Z7D3 282 aa6.14□□□□□ -1.43
PCNX1-213ENST00000556846 MEX3DQ86XN8 651 aaKnown RBP6.14□□□□□ -1.43
PCNX1-213ENST00000556846 SLC15A3Q8IY34 581 aa6.14□□□□□ -1.43
PCNX1-213ENST00000556846 RNF113BQ8IZP6 322 aaKnown RBP6.14□□□□□ -1.43
PCNX1-213ENST00000556846 CLDN22Q8N7P3 220 aa6.14□□□□□ -1.43
PCNX1-213ENST00000556846 CPEB3Q8NE35 698 aaKnown RBP6.14□□□□□ -1.43
PCNX1-213ENST00000556846 AKR7LQ8NHP1 331 aa6.14□□□□□ -1.43
PCNX1-213ENST00000556846 CLDND2Q8NHS1 167 aa6.14□□□□□ -1.43
PCNX1-213ENST00000556846 ABHD4Q8TB40 342 aa6.14□□□□□ -1.43
PCNX1-213ENST00000556846 YIPF5Q969M3 257 aa6.14□□□□□ -1.43
PCNX1-213ENST00000556846 FAHD2AQ96GK7 314 aa6.14□□□□□ -1.43
PCNX1-213ENST00000556846 TIMD4Q96H15 378 aa6.14□□□□□ -1.43
PCNX1-213ENST00000556846 TSPAN32Q96QS1 320 aa6.14□□□□□ -1.43
PCNX1-213ENST00000556846 SEPHS2Q99611 448 aa6.14□□□□□ -1.43
PCNX1-213ENST00000556846 ALG12Q9BV10 488 aa6.14□□□□□ -1.43
PCNX1-213ENST00000556846 RERGLQ9H628 205 aa6.14□□□□□ -1.43
PCNX1-213ENST00000556846 A4GNTQ9UNA3 340 aa6.14□□□□□ -1.43
PCNX1-213ENST00000556846 HIF3AQ9Y2N7 669 aa6.14□□□□□ -1.43
PCNX1-213ENST00000556846 GRIP1Q9Y3R0 1128 aa6.14□□□□□ -1.43
PCNX1-213ENST00000556846 SNX13Q9Y5W8 968 aa6.14□□□□□ -1.43
PCNX1-213ENST00000556846 ZNF469Q96JG9 3925 aaPredicted RBP6.13□□□□□ -1.43
PCNX1-213ENST00000556846 ALPK2Q86TB3 2170 aa6.13□□□□□ -1.43
PCNX1-213ENST00000556846 IGLV3-9A0A075B6K5 115 aa6.13□□□□□ -1.43
PCNX1-213ENST00000556846 IGKV1D-43A0A0B4J1Z2 117 aa6.13□□□□□ -1.43
PCNX1-213ENST00000556846 IGHV1-69-2A0A0G2JMI3 117 aa6.13□□□□□ -1.43
PCNX1-213ENST00000556846 NPIPB13A6NJU9 1138 aa6.13□□□□□ -1.43
PCNX1-213ENST00000556846 C12orf71A8MTZ7 269 aa6.13□□□□□ -1.43
PCNX1-213ENST00000556846 NPIPB4C9JG80 1138 aa6.13□□□□□ -1.43
PCNX1-213ENST00000556846 WNT9BO14905 357 aa6.13□□□□□ -1.43
PCNX1-213ENST00000556846 TCF21O43680 179 aa6.13□□□□□ -1.43
PCNX1-213ENST00000556846 NCR1O76036 304 aa6.13□□□□□ -1.43
PCNX1-213ENST00000556846 TFP02787 698 aa6.13□□□□□ -1.43
PCNX1-213ENST00000556846 CST2P09228 141 aa6.13□□□□□ -1.43
PCNX1-213ENST00000556846 MMP7P09237 267 aaPredicted RBP6.13□□□□□ -1.43
PCNX1-213ENST00000556846 TSPAN19P0C672 248 aa6.13□□□□□ -1.43
PCNX1-213ENST00000556846 NCK1P16333 377 aa6.13□□□□□ -1.43
PCNX1-213ENST00000556846 MDH1P40925 334 aaKnown RBP6.13□□□□□ -1.43
PCNX1-213ENST00000556846 CRYBB2P43320 205 aa6.13□□□□□ -1.43
PCNX1-213ENST00000556846 GPR4P46093 362 aa6.13□□□□□ -1.43
PCNX1-213ENST00000556846 SLC9A3P48764 834 aa6.13□□□□□ -1.43
PCNX1-213ENST00000556846 CENPAP49450 140 aa6.13□□□□□ -1.43
PCNX1-213ENST00000556846 NUDT2P50583 147 aa6.13□□□□□ -1.43
PCNX1-213ENST00000556846 ZNF133P52736 654 aaPredicted RBP6.13□□□□□ -1.43
PCNX1-213ENST00000556846 PPP1CBP62140 327 aa6.13□□□□□ -1.43
PCNX1-213ENST00000556846 KRT72Q14CN4 511 aa6.13□□□□□ -1.43
PCNX1-213ENST00000556846 KRTAP24-1Q3LI83 254 aa6.13□□□□□ -1.43
PCNX1-213ENST00000556846 ANKDD1AQ495B1 522 aa6.13□□□□□ -1.43
PCNX1-213ENST00000556846 ZBED5Q49AG3 693 aa6.13□□□□□ -1.43
PCNX1-213ENST00000556846 TBPL2Q6SJ96 375 aa6.13□□□□□ -1.43
PCNX1-213ENST00000556846 MBOAT2Q6ZWT7 520 aa6.13□□□□□ -1.43
PCNX1-213ENST00000556846 USP51Q70EK9 711 aa6.13□□□□□ -1.43
PCNX1-213ENST00000556846 CBLL1Q75N03 491 aa6.13□□□□□ -1.43
PCNX1-213ENST00000556846 C1orf174Q8IYL3 243 aa6.13□□□□□ -1.43
PCNX1-213ENST00000556846 OFCC1Q8IZS5 231 aa6.13□□□□□ -1.43
PCNX1-213ENST00000556846 RFLNBQ8N5W9 214 aa6.13□□□□□ -1.43
PCNX1-213ENST00000556846 OR13C2Q8NGS9 318 aa6.13□□□□□ -1.43
PCNX1-213ENST00000556846 OR51F2Q8NH61 342 aa6.13□□□□□ -1.43
PCNX1-213ENST00000556846 SLC25A40Q8TBP6 338 aa6.13□□□□□ -1.43
PCNX1-213ENST00000556846 GEMIN6Q8WXD5 167 aaKnown RBP6.13□□□□□ -1.43
PCNX1-213ENST00000556846 ACOT11Q8WXI4 607 aaPredicted RBP6.13□□□□□ -1.43
PCNX1-213ENST00000556846 CCL17Q92583 94 aa6.13□□□□□ -1.43
PCNX1-213ENST00000556846 RAB1CQ92928 201 aa6.13□□□□□ -1.43
PCNX1-213ENST00000556846 TMEM186Q96B77 213 aa6.13□□□□□ -1.43
PCNX1-213ENST00000556846 ELMOD3Q96FG2 381 aa6.13□□□□□ -1.43
PCNX1-213ENST00000556846 HSH2DQ96JZ2 352 aa6.13□□□□□ -1.43
PCNX1-213ENST00000556846 POM121L2Q96KW2 1035 aa6.13□□□□□ -1.43
PCNX1-213ENST00000556846 C4orf45Q96LM5 186 aa6.13□□□□□ -1.43
PCNX1-213ENST00000556846 KCTD14Q9BQ13 255 aaPredicted RBP6.13□□□□□ -1.43
PCNX1-213ENST00000556846 C19orf24Q9BVV8 132 aa6.13□□□□□ -1.43
PCNX1-213ENST00000556846 OR2H1Q9GZK4 316 aa6.13□□□□□ -1.43
PCNX1-213ENST00000556846 EGLN1Q9GZT9 426 aa6.13□□□□□ -1.43
PCNX1-213ENST00000556846 METTL17Q9H7H0 456 aaPredicted RBP6.13□□□□□ -1.43
PCNX1-213ENST00000556846 SAP30LQ9HAJ7 183 aa6.13□□□□□ -1.43
PCNX1-213ENST00000556846 ELOVL3Q9HB03 270 aa6.13□□□□□ -1.43
PCNX1-213ENST00000556846 CYSLTR2Q9NS75 346 aa6.13□□□□□ -1.43
PCNX1-213ENST00000556846 HIF1ANQ9NWT6 349 aa6.13□□□□□ -1.43
PCNX1-213ENST00000556846 RPS6KA6Q9UK32 745 aa6.13□□□□□ -1.43
PCNX1-213ENST00000556846 UGT2A1Q9Y4X1 527 aa6.13□□□□□ -1.43
PCNX1-213ENST00000556846 CR1P17927 2039 aa6.13□□□□□ -1.43
PCNX1-213ENST00000556846 CHD3Q12873 2000 aaKnown RBP6.13□□□□□ -1.43
PCNX1-213ENST00000556846 MAP1AP78559 2803 aaPredicted RBP6.12□□□□□ -1.43
PCNX1-213ENST00000556846 LOC100509620A0A075B734 347 aa6.12□□□□□ -1.43
PCNX1-213ENST00000556846 A0A087WUU8 490 aa6.12□□□□□ -1.43
PCNX1-213ENST00000556846 ISPDA4D126 451 aa6.12□□□□□ -1.43
PCNX1-213ENST00000556846 FAM157AC9JC47 383 aa6.12□□□□□ -1.43
PCNX1-213ENST00000556846 CLDN25C9JDP6 229 aa6.12□□□□□ -1.43
PCNX1-213ENST00000556846 H7C1C5 153 aa6.12□□□□□ -1.43
PCNX1-213ENST00000556846 NME4O00746 187 aa6.12□□□□□ -1.43
PCNX1-213ENST00000556846 FFAR1O14842 300 aa6.12□□□□□ -1.43
PCNX1-213ENST00000556846 TIMM8AO60220 97 aaPredicted RBP6.12□□□□□ -1.43
PCNX1-213ENST00000556846 IGHV3-13P01766 116 aa6.12□□□□□ -1.43
PCNX1-213ENST00000556846 H1F0P07305 194 aaKnown RBP6.12□□□□□ -1.43
PCNX1-213ENST00000556846 MSMBP08118 114 aa6.12□□□□□ -1.43
PCNX1-213ENST00000556846 GAAP10253 952 aa6.12□□□□□ -1.43
PCNX1-213ENST00000556846 MSR1P21757 451 aa6.12□□□□□ -1.43
PCNX1-213ENST00000556846 FUT4P22083 530 aa6.12□□□□□ -1.43
PCNX1-213ENST00000556846 LIPAP38571 399 aa6.12□□□□□ -1.43
PCNX1-213ENST00000556846 MPV17P39210 176 aa6.12□□□□□ -1.43
PCNX1-213ENST00000556846 WNT5AP41221 380 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms