RNA–Protein interactions for RNA: ENST00000556063.1

TDP1-214, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 1,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-214ENST00000556063 ADAM8P78325 824 aa6.67□□□□□ -1.34
TDP1-214ENST00000556063 EFNB1P98172 346 aa6.67□□□□□ -1.34
TDP1-214ENST00000556063 IL5RAQ01344 420 aa6.67□□□□□ -1.34
TDP1-214ENST00000556063 PIGFQ07326 219 aa6.67□□□□□ -1.34
TDP1-214ENST00000556063 POU4F2Q12837 409 aa6.67□□□□□ -1.34
TDP1-214ENST00000556063 AQP6Q13520 282 aa6.67□□□□□ -1.34
TDP1-214ENST00000556063 APOFQ13790 326 aa6.67□□□□□ -1.34
TDP1-214ENST00000556063 DAZAP2Q15038 168 aaPredicted RBP6.67□□□□□ -1.34
TDP1-214ENST00000556063 OCLNQ16625 522 aa6.67□□□□□ -1.34
TDP1-214ENST00000556063 SLC25A30Q5SVS4 291 aa6.67□□□□□ -1.34
TDP1-214ENST00000556063 IZUMO2Q6UXV1 221 aa6.67□□□□□ -1.34
TDP1-214ENST00000556063 MEPCEQ7L2J0 689 aaKnown RBP6.67□□□□□ -1.34
TDP1-214ENST00000556063 SHFQ7M4L6 423 aa6.67□□□□□ -1.34
TDP1-214ENST00000556063 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.67□□□□□ -1.34
TDP1-214ENST00000556063 C8orf59Q8N0T1 100 aaPredicted RBP6.67□□□□□ -1.34
TDP1-214ENST00000556063 ACBD4Q8NC06 268 aa6.67□□□□□ -1.34
TDP1-214ENST00000556063 GJC3Q8NFK1 279 aa6.67□□□□□ -1.34
TDP1-214ENST00000556063 SLC26A10Q8NG04 563 aa6.67□□□□□ -1.34
TDP1-214ENST00000556063 OR51L1Q8NGJ5 315 aa6.67□□□□□ -1.34
TDP1-214ENST00000556063 OR1J2Q8NGS2 313 aa6.67□□□□□ -1.34
TDP1-214ENST00000556063 NRG4Q8WWG1 115 aa6.67□□□□□ -1.34
TDP1-214ENST00000556063 NABP1Q96AH0 204 aa6.67□□□□□ -1.34
TDP1-214ENST00000556063 RADILQ96JH8 1075 aa6.67□□□□□ -1.34
TDP1-214ENST00000556063 FOXN4Q96NZ1 517 aa6.67□□□□□ -1.34
TDP1-214ENST00000556063 INTS14Q96SY0 518 aa6.67□□□□□ -1.34
TDP1-214ENST00000556063 SH3GL3Q99963 347 aa6.67□□□□□ -1.34
TDP1-214ENST00000556063 ZNF416Q9BWM5 594 aa6.67□□□□□ -1.34
TDP1-214ENST00000556063 Q9H521 79 aa6.67□□□□□ -1.34
TDP1-214ENST00000556063 MED20Q9H944 212 aa6.67□□□□□ -1.34
TDP1-214ENST00000556063 EMC7Q9NPA0 242 aa6.67□□□□□ -1.34
TDP1-214ENST00000556063 WARS2Q9UGM6 360 aaKnown RBP6.67□□□□□ -1.34
TDP1-214ENST00000556063 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP6.67□□□□□ -1.34
TDP1-214ENST00000556063 A0A1W2PR80 420 aa6.66□□□□□ -1.34
TDP1-214ENST00000556063 TVP23AA6NH52 213 aa6.66□□□□□ -1.34
TDP1-214ENST00000556063 VSTM5A8MXK1 200 aa6.66□□□□□ -1.34
TDP1-214ENST00000556063 E9PQ18 207 aa6.66□□□□□ -1.34
TDP1-214ENST00000556063 M0R1B8 84 aa6.66□□□□□ -1.34
TDP1-214ENST00000556063 DLGAP1O14490 977 aa6.66□□□□□ -1.34
TDP1-214ENST00000556063 CRYAAP02489 173 aa6.66□□□□□ -1.34
TDP1-214ENST00000556063 TFP02787 698 aa6.66□□□□□ -1.34
TDP1-214ENST00000556063 SERPINA5P05154 406 aa6.66□□□□□ -1.34
TDP1-214ENST00000556063 THBDP07204 575 aa6.66□□□□□ -1.34
TDP1-214ENST00000556063 CD3EP07766 207 aa6.66□□□□□ -1.34
TDP1-214ENST00000556063 SPARCP09486 303 aa6.66□□□□□ -1.34
TDP1-214ENST00000556063 GAAP10253 952 aa6.66□□□□□ -1.34
TDP1-214ENST00000556063 CLUP10909 449 aa6.66□□□□□ -1.34
TDP1-214ENST00000556063 ZNF32P17041 273 aa6.66□□□□□ -1.34
TDP1-214ENST00000556063 HTR1FP30939 366 aa6.66□□□□□ -1.34
TDP1-214ENST00000556063 APLNRP35414 380 aa6.66□□□□□ -1.34
TDP1-214ENST00000556063 IDH3GP51553 393 aaPredicted RBP6.66□□□□□ -1.34
TDP1-214ENST00000556063 AQP4P55087 323 aa6.66□□□□□ -1.34
TDP1-214ENST00000556063 TUBA1BP68363 451 aa6.66□□□□□ -1.34
TDP1-214ENST00000556063 TUBA4AP68366 448 aa6.66□□□□□ -1.34
TDP1-214ENST00000556063 ADARB1P78563 741 aaKnown RBP6.66□□□□□ -1.34
TDP1-214ENST00000556063 ECH1Q13011 328 aa6.66□□□□□ -1.34
TDP1-214ENST00000556063 SNTB1Q13884 538 aaKnown RBP6.66□□□□□ -1.34
TDP1-214ENST00000556063 ENDOGQ14249 297 aaKnown RBP6.66□□□□□ -1.34
TDP1-214ENST00000556063 PABPC1L2AQ5JQF8 200 aa6.66□□□□□ -1.34
TDP1-214ENST00000556063 TEX30Q5JUR7 227 aa6.66□□□□□ -1.34
TDP1-214ENST00000556063 LINC01590Q5TEZ4 76 aa6.66□□□□□ -1.34
TDP1-214ENST00000556063 AADACL4Q5VUY2 407 aa6.66□□□□□ -1.34
TDP1-214ENST00000556063 ZNF691Q5VV52 312 aa6.66□□□□□ -1.34
TDP1-214ENST00000556063 ARL9Q6T311 187 aa6.66□□□□□ -1.34
TDP1-214ENST00000556063 UNQ6126/PRO20091Q6UXV3 157 aa6.66□□□□□ -1.34
TDP1-214ENST00000556063 TUBA1AQ71U36 451 aa6.66□□□□□ -1.34
TDP1-214ENST00000556063 MDP1Q86V88 176 aa6.66□□□□□ -1.34
TDP1-214ENST00000556063 ERI1Q8IV48 349 aaKnown RBP6.66□□□□□ -1.34
TDP1-214ENST00000556063 ZNF454Q8N9F8 522 aa6.66□□□□□ -1.34
TDP1-214ENST00000556063 ZNF511Q8NB15 262 aa6.66□□□□□ -1.34
TDP1-214ENST00000556063 OR6N2Q8NGY6 317 aa6.66□□□□□ -1.34
TDP1-214ENST00000556063 RHOXF1Q8NHV9 184 aa6.66□□□□□ -1.34
TDP1-214ENST00000556063 IPCEF1Q8WWN9 437 aaPredicted RBP6.66□□□□□ -1.34
TDP1-214ENST00000556063 TFAP2CQ92754 450 aa6.66□□□□□ -1.34
TDP1-214ENST00000556063 ZMYND19Q96E35 227 aaPredicted RBP6.66□□□□□ -1.34
TDP1-214ENST00000556063 ZNF582Q96NG8 517 aaPredicted RBP6.66□□□□□ -1.34
TDP1-214ENST00000556063 MYCBPQ99417 103 aaPredicted RBP6.66□□□□□ -1.34
TDP1-214ENST00000556063 CNN2Q99439 309 aaKnown RBP6.66□□□□□ -1.34
TDP1-214ENST00000556063 MNTQ99583 582 aa6.66□□□□□ -1.34
TDP1-214ENST00000556063 TEAD3Q99594 435 aa6.66□□□□□ -1.34
TDP1-214ENST00000556063 HCAR1Q9BXC0 346 aa6.66□□□□□ -1.34
TDP1-214ENST00000556063 C1QTNF6Q9BXI9 259 aa6.66□□□□□ -1.34
TDP1-214ENST00000556063 OR2H1Q9GZK4 316 aa6.66□□□□□ -1.34
TDP1-214ENST00000556063 YIPF3Q9GZM5 350 aa6.66□□□□□ -1.34
TDP1-214ENST00000556063 HDHD2Q9H0R4 259 aa6.66□□□□□ -1.34
TDP1-214ENST00000556063 CDH20Q9HBT6 801 aa6.66□□□□□ -1.34
TDP1-214ENST00000556063 RASSF1Q9NS23 344 aa6.66□□□□□ -1.34
TDP1-214ENST00000556063 B3GNT2Q9NY97 397 aa6.66□□□□□ -1.34
TDP1-214ENST00000556063 HAO2Q9NYQ3 351 aa6.66□□□□□ -1.34
TDP1-214ENST00000556063 PLEK2Q9NYT0 353 aa6.66□□□□□ -1.34
TDP1-214ENST00000556063 DNAJC27Q9NZQ0 273 aa6.66□□□□□ -1.34
TDP1-214ENST00000556063 CRNNQ9UBG3 495 aaPredicted RBP6.66□□□□□ -1.34
TDP1-214ENST00000556063 ASH2LQ9UBL3 628 aa6.66□□□□□ -1.34
TDP1-214ENST00000556063 SPEF1Q9Y4P9 236 aa6.66□□□□□ -1.34
TDP1-214ENST00000556063 PCDHGB1Q9Y5G3 927 aa6.66□□□□□ -1.34
TDP1-214ENST00000556063 TMEM14AQ9Y6G1 99 aa6.66□□□□□ -1.34
TDP1-214ENST00000556063 COMMD3-BMI1R4GMX3 469 aa6.66□□□□□ -1.34
TDP1-214ENST00000556063 AKAP6Q13023 2319 aa6.66□□□□□ -1.34
TDP1-214ENST00000556063 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.65□□□□□ -1.34
TDP1-214ENST00000556063 IRGMA1A4Y4 181 aa6.65□□□□□ -1.34
TDP1-214ENST00000556063 A6NNC1 897 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms