RNA–Protein interactions for RNA: ENST00000554928.1

SYNE2-214, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 1,048 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-214ENST00000554928 PYDC1Q8WXC3 89 aa10.66□□□□□ -0.7
SYNE2-214ENST00000554928 GSX2Q9BZM3 304 aa10.66□□□□□ -0.7
SYNE2-214ENST00000554928 CBLN4Q9NTU7 201 aa10.66□□□□□ -0.7
SYNE2-214ENST00000554928 FZR1Q9UM11 496 aa10.66□□□□□ -0.7
SYNE2-214ENST00000554928 EDARQ9UNE0 448 aa10.66□□□□□ -0.7
SYNE2-214ENST00000554928 AP4S1Q9Y587 144 aa10.66□□□□□ -0.7
SYNE2-214ENST00000554928 HIVEP1P15822 2718 aa10.65□□□□□ -0.7
SYNE2-214ENST00000554928 H3BNX3 289 aa10.65□□□□□ -0.7
SYNE2-214ENST00000554928 MITFO75030 526 aaPredicted RBP10.65□□□□□ -0.7
SYNE2-214ENST00000554928 LY6HO94772 140 aa10.65□□□□□ -0.7
SYNE2-214ENST00000554928 RENP00797 406 aa10.65□□□□□ -0.7
SYNE2-214ENST00000554928 GYPBP06028 91 aa10.65□□□□□ -0.7
SYNE2-214ENST00000554928 FAM157BP0CG42 384 aa10.65□□□□□ -0.7
SYNE2-214ENST00000554928 CLUP10909 449 aa10.65□□□□□ -0.7
SYNE2-214ENST00000554928 PAX1P15863 534 aa10.65□□□□□ -0.7
SYNE2-214ENST00000554928 GSTM3P21266 225 aa10.65□□□□□ -0.7
SYNE2-214ENST00000554928 PAX7P23759 505 aa10.65□□□□□ -0.7
SYNE2-214ENST00000554928 POU1F1P28069 291 aa10.65□□□□□ -0.7
SYNE2-214ENST00000554928 WNT5AP41221 380 aa10.65□□□□□ -0.7
SYNE2-214ENST00000554928 CENPAP49450 140 aa10.65□□□□□ -0.7
SYNE2-214ENST00000554928 ATP5J2P56134 94 aa10.65□□□□□ -0.7
SYNE2-214ENST00000554928 ACTR3P61158 418 aa10.65□□□□□ -0.7
SYNE2-214ENST00000554928 HSF2Q03933 536 aa10.65□□□□□ -0.7
SYNE2-214ENST00000554928 DAG1Q14118 895 aa10.65□□□□□ -0.7
SYNE2-214ENST00000554928 CRMP1Q14194 572 aa10.65□□□□□ -0.7
SYNE2-214ENST00000554928 SWI5Q1ZZU3 235 aa10.65□□□□□ -0.7
SYNE2-214ENST00000554928 TMEM255AQ5JRV8 349 aa10.65□□□□□ -0.7
SYNE2-214ENST00000554928 AGAP6Q5VW22 663 aa10.65□□□□□ -0.7
SYNE2-214ENST00000554928 TMEM236Q5W0B7 351 aa10.65□□□□□ -0.7
SYNE2-214ENST00000554928 RPL13AP3Q6NVV1 102 aa10.65□□□□□ -0.7
SYNE2-214ENST00000554928 FAHD1Q6P587 224 aa10.65□□□□□ -0.7
SYNE2-214ENST00000554928 CORO6Q6QEF8 472 aa10.65□□□□□ -0.7
SYNE2-214ENST00000554928 GLB1L2Q8IW92 636 aa10.65□□□□□ -0.7
SYNE2-214ENST00000554928 OR4F15Q8NGB8 312 aa10.65□□□□□ -0.7
SYNE2-214ENST00000554928 OR51L1Q8NGJ5 315 aa10.65□□□□□ -0.7
SYNE2-214ENST00000554928 SLC7A6Q92536 515 aa10.65□□□□□ -0.7
SYNE2-214ENST00000554928 POM121L2Q96KW2 1035 aa10.65□□□□□ -0.7
SYNE2-214ENST00000554928 SNX18Q96RF0 628 aa10.65□□□□□ -0.7
SYNE2-214ENST00000554928 HCAR1Q9BXC0 346 aa10.65□□□□□ -0.7
SYNE2-214ENST00000554928 SEMA6AQ9H2E6 1030 aa10.65□□□□□ -0.7
SYNE2-214ENST00000554928 HEATR1Q9H583 2144 aaKnown RBP10.65□□□□□ -0.7
SYNE2-214ENST00000554928 CXorf56Q9H5V9 222 aa10.65□□□□□ -0.7
SYNE2-214ENST00000554928 YY1AP1Q9H869 796 aa10.65□□□□□ -0.7
SYNE2-214ENST00000554928 MED20Q9H944 212 aa10.65□□□□□ -0.7
SYNE2-214ENST00000554928 MOV10Q9HCE1 1003 aaKnown RBP10.65□□□□□ -0.7
SYNE2-214ENST00000554928 CCNB1IP1Q9NPC3 277 aa10.65□□□□□ -0.7
SYNE2-214ENST00000554928 MRPL22Q9NWU5 206 aaKnown RBP10.65□□□□□ -0.7
SYNE2-214ENST00000554928 MYEF2Q9P2K5 600 aaKnown RBP10.65□□□□□ -0.7
SYNE2-214ENST00000554928 RTTNQ86VV8 2226 aa10.64□□□□□ -0.71
SYNE2-214ENST00000554928 TRIM64A6NGJ6 449 aa10.64□□□□□ -0.71
SYNE2-214ENST00000554928 TVP23AA6NH52 213 aa10.64□□□□□ -0.71
SYNE2-214ENST00000554928 TRIM64BA6NI03 449 aa10.64□□□□□ -0.71
SYNE2-214ENST00000554928 IDH3BO43837 385 aa10.64□□□□□ -0.71
SYNE2-214ENST00000554928 DEAF1O75398 565 aaPredicted RBP10.64□□□□□ -0.71
SYNE2-214ENST00000554928 CCNOP22674 350 aa10.64□□□□□ -0.71
SYNE2-214ENST00000554928 SERPINF1P36955 418 aa10.64□□□□□ -0.71
SYNE2-214ENST00000554928 RPS27P42677 84 aaKnown RBP10.64□□□□□ -0.71
SYNE2-214ENST00000554928 GK3PQ14409 553 aa10.64□□□□□ -0.71
SYNE2-214ENST00000554928 KCNMB1Q16558 191 aa10.64□□□□□ -0.71
SYNE2-214ENST00000554928 CCDC92Q53HC0 331 aaPredicted RBP10.64□□□□□ -0.71
SYNE2-214ENST00000554928 YTHDF3Q7Z739 585 aaKnown RBP10.64□□□□□ -0.71
SYNE2-214ENST00000554928 DPPA2Q7Z7J5 298 aa10.64□□□□□ -0.71
SYNE2-214ENST00000554928 ZBTB46Q86UZ6 589 aa10.64□□□□□ -0.71
SYNE2-214ENST00000554928 TGIF2LYQ8IUE0 185 aa10.64□□□□□ -0.71
SYNE2-214ENST00000554928 LINC00346Q8IVM7 164 aa10.64□□□□□ -0.71
SYNE2-214ENST00000554928 ZNF101Q8IZC7 436 aa10.64□□□□□ -0.71
SYNE2-214ENST00000554928 LRRC75A-AS1Q8N1F1 130 aa10.64□□□□□ -0.71
SYNE2-214ENST00000554928 ZCCHC24Q8N2G6 241 aaKnown RBP10.64□□□□□ -0.71
SYNE2-214ENST00000554928 CIARTQ8N365 385 aaPredicted RBP10.64□□□□□ -0.71
SYNE2-214ENST00000554928 SVOPLQ8N434 492 aa10.64□□□□□ -0.71
SYNE2-214ENST00000554928 ATG16L2Q8NAA4 619 aa10.64□□□□□ -0.71
SYNE2-214ENST00000554928 SLC26A10Q8NG04 563 aa10.64□□□□□ -0.71
SYNE2-214ENST00000554928 OR2T33Q8NG76 320 aa10.64□□□□□ -0.71
SYNE2-214ENST00000554928 OR5K1Q8NHB7 308 aa10.64□□□□□ -0.71
SYNE2-214ENST00000554928 PKP2Q99959 881 aa10.64□□□□□ -0.71
SYNE2-214ENST00000554928 RBM4Q9BWF3 364 aaKnown RBP10.64□□□□□ -0.71
SYNE2-214ENST00000554928 MRPL37Q9BZE1 423 aaKnown RBP10.64□□□□□ -0.71
SYNE2-214ENST00000554928 RACGAP1Q9H0H5 632 aa10.64□□□□□ -0.71
SYNE2-214ENST00000554928 ASH2LQ9UBL3 628 aa10.64□□□□□ -0.71
SYNE2-214ENST00000554928 LHFPL6Q9Y693 200 aa10.64□□□□□ -0.71
SYNE2-214ENST00000554928 ARID1AO14497 2285 aa10.64□□□□□ -0.71
SYNE2-214ENST00000554928 F8P00451 2351 aa10.63□□□□□ -0.71
SYNE2-214ENST00000554928 ITPR3Q14573 2671 aa10.63□□□□□ -0.71
SYNE2-214ENST00000554928 IQCMA0A1B0GVH7 501 aa10.63□□□□□ -0.71
SYNE2-214ENST00000554928 C5orf49A4QMS7 147 aa10.63□□□□□ -0.71
SYNE2-214ENST00000554928 FAM183AA6NL82 134 aa10.63□□□□□ -0.71
SYNE2-214ENST00000554928 H3BN98 237 aa10.63□□□□□ -0.71
SYNE2-214ENST00000554928 RER1O15258 196 aa10.63□□□□□ -0.71
SYNE2-214ENST00000554928 OSMP13725 252 aa10.63□□□□□ -0.71
SYNE2-214ENST00000554928 HOXB6P17509 224 aaKnown RBP10.63□□□□□ -0.71
SYNE2-214ENST00000554928 FASP25445 335 aa10.63□□□□□ -0.71
SYNE2-214ENST00000554928 STOMP27105 288 aa10.63□□□□□ -0.71
SYNE2-214ENST00000554928 EPHA2P29317 976 aa10.63□□□□□ -0.71
SYNE2-214ENST00000554928 CRABP1P29762 137 aa10.63□□□□□ -0.71
SYNE2-214ENST00000554928 COX10Q12887 443 aa10.63□□□□□ -0.71
SYNE2-214ENST00000554928 GINS1Q14691 196 aa10.63□□□□□ -0.71
SYNE2-214ENST00000554928 TBC1D28Q2M2D7 210 aa10.63□□□□□ -0.71
SYNE2-214ENST00000554928 RFPL4BQ6ZWI9 263 aa10.63□□□□□ -0.71
SYNE2-214ENST00000554928 VASH1Q7L8A9 365 aaPredicted RBP10.63□□□□□ -0.71
SYNE2-214ENST00000554928 IL17RDQ8NFM7 739 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms