RNA–Protein interactions for RNA: ENST00000554604.5

SHMT2-214, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-214ENST00000554604 MMP27Q9H306 513 aa10.94□□□□□ -0.66
SHMT2-214ENST00000554604 ESRP2Q9H6T0 727 aaKnown RBP10.94□□□□□ -0.66
SHMT2-214ENST00000554604 HMG20AQ9NP66 347 aa10.94□□□□□ -0.66
SHMT2-214ENST00000554604 AKIP1Q9NQ31 210 aa10.94□□□□□ -0.66
SHMT2-214ENST00000554604 IL20RAQ9UHF4 553 aa10.94□□□□□ -0.66
SHMT2-214ENST00000554604 STUB1Q9UNE7 303 aa10.94□□□□□ -0.66
SHMT2-214ENST00000554604 TLN2Q9Y4G6 2542 aa10.94□□□□□ -0.66
SHMT2-214ENST00000554604 NAV3Q8IVL0 2385 aa10.94□□□□□ -0.66
SHMT2-214ENST00000554604 VPS13CQ709C8 3753 aa10.93□□□□□ -0.66
SHMT2-214ENST00000554604 LOC100506127A0A0U1RQW1 187 aa10.93□□□□□ -0.66
SHMT2-214ENST00000554604 CIB4A0PJX0 185 aa10.93□□□□□ -0.66
SHMT2-214ENST00000554604 SLC22A31A6NKX4 558 aa10.93□□□□□ -0.66
SHMT2-214ENST00000554604 ELOA3DA6NLF2 546 aaPredicted RBP10.93□□□□□ -0.66
SHMT2-214ENST00000554604 RIIAD1A6NNX1 92 aa10.93□□□□□ -0.66
SHMT2-214ENST00000554604 A8MVM7 634 aa10.93□□□□□ -0.66
SHMT2-214ENST00000554604 PRR23D1E9PI22 279 aaPredicted RBP10.93□□□□□ -0.66
SHMT2-214ENST00000554604 J3QRE1 110 aa10.93□□□□□ -0.66
SHMT2-214ENST00000554604 RAMP1O60894 148 aa10.93□□□□□ -0.66
SHMT2-214ENST00000554604 GPX5O75715 221 aa10.93□□□□□ -0.66
SHMT2-214ENST00000554604 OR7A10O76100 309 aa10.93□□□□□ -0.66
SHMT2-214ENST00000554604 CD3EP07766 207 aa10.93□□□□□ -0.66
SHMT2-214ENST00000554604 PRR23D2P0DMB1 279 aaPredicted RBP10.93□□□□□ -0.66
SHMT2-214ENST00000554604 IMPDH2P12268 514 aa10.93□□□□□ -0.66
SHMT2-214ENST00000554604 ZNF3P17036 446 aa10.93□□□□□ -0.66
SHMT2-214ENST00000554604 EDNRAP25101 427 aa10.93□□□□□ -0.66
SHMT2-214ENST00000554604 PSMA1P25786 263 aaKnown RBP10.93□□□□□ -0.66
SHMT2-214ENST00000554604 OPRL1P41146 370 aa10.93□□□□□ -0.66
SHMT2-214ENST00000554604 H3F3AP84243 136 aa10.93□□□□□ -0.66
SHMT2-214ENST00000554604 TPBGQ13641 420 aa10.93□□□□□ -0.66
SHMT2-214ENST00000554604 OR7A5Q15622 319 aa10.93□□□□□ -0.66
SHMT2-214ENST00000554604 ELOA3BQ3SY89 546 aa10.93□□□□□ -0.66
SHMT2-214ENST00000554604 ANKDD1AQ495B1 522 aa10.93□□□□□ -0.66
SHMT2-214ENST00000554604 SHEQ5VZ18 495 aa10.93□□□□□ -0.66
SHMT2-214ENST00000554604 FBXW9Q5XUX1 488 aa10.93□□□□□ -0.66
SHMT2-214ENST00000554604 PLBD1Q6P4A8 553 aa10.93□□□□□ -0.66
SHMT2-214ENST00000554604 PAQR6Q6TCH4 344 aa10.93□□□□□ -0.66
SHMT2-214ENST00000554604 PHC2Q8IXK0 858 aa10.93□□□□□ -0.66
SHMT2-214ENST00000554604 ZNF485Q8NCK3 441 aa10.93□□□□□ -0.66
SHMT2-214ENST00000554604 BBS1Q8NFJ9 593 aa10.93□□□□□ -0.66
SHMT2-214ENST00000554604 ELOA3Q8NG57 546 aa10.93□□□□□ -0.66
SHMT2-214ENST00000554604 OR52N1Q8NH53 320 aa10.93□□□□□ -0.66
SHMT2-214ENST00000554604 OR51A7Q8NH64 312 aa10.93□□□□□ -0.66
SHMT2-214ENST00000554604 CENPOQ9BU64 300 aa10.93□□□□□ -0.66
SHMT2-214ENST00000554604 INPP5EQ9NRR6 644 aa10.93□□□□□ -0.66
SHMT2-214ENST00000554604 PARPBPQ9NWS1 579 aa10.93□□□□□ -0.66
SHMT2-214ENST00000554604 ASB6Q9NWX5 421 aa10.93□□□□□ -0.66
SHMT2-214ENST00000554604 KLHL21Q9UJP4 597 aa10.93□□□□□ -0.66
SHMT2-214ENST00000554604 RNF115Q9Y4L5 304 aa10.93□□□□□ -0.66
SHMT2-214ENST00000554604 ZNF469Q96JG9 3925 aaPredicted RBP10.93□□□□□ -0.66
SHMT2-214ENST00000554604 IGKV1D-42A0A075B6H8 117 aa10.92□□□□□ -0.66
SHMT2-214ENST00000554604 LIPT2A6NK58 231 aa10.92□□□□□ -0.66
SHMT2-214ENST00000554604 HS3ST1O14792 307 aa10.92□□□□□ -0.66
SHMT2-214ENST00000554604 IDH3BO43837 385 aa10.92□□□□□ -0.66
SHMT2-214ENST00000554604 AKR7A3O95154 331 aa10.92□□□□□ -0.66
SHMT2-214ENST00000554604 PPP1R3DO95685 299 aa10.92□□□□□ -0.66
SHMT2-214ENST00000554604 PLAUP00749 431 aa10.92□□□□□ -0.66
SHMT2-214ENST00000554604 COX5AP20674 150 aa10.92□□□□□ -0.66
SHMT2-214ENST00000554604 PAICSP22234 425 aaKnown RBP10.92□□□□□ -0.66
SHMT2-214ENST00000554604 SLC2A5P22732 501 aa10.92□□□□□ -0.66
SHMT2-214ENST00000554604 IGHV1-2P23083 117 aa10.92□□□□□ -0.66
SHMT2-214ENST00000554604 HOXC12P31275 282 aa10.92□□□□□ -0.66
SHMT2-214ENST00000554604 TGFBR1P36897 503 aa10.92□□□□□ -0.66
SHMT2-214ENST00000554604 CRYBB2P43320 205 aa10.92□□□□□ -0.66
SHMT2-214ENST00000554604 RIPPLY3P57055 190 aa10.92□□□□□ -0.66
SHMT2-214ENST00000554604 RPS4XP62701 263 aaKnown RBP10.92□□□□□ -0.66
SHMT2-214ENST00000554604 FAPQ12884 760 aa10.92□□□□□ -0.66
SHMT2-214ENST00000554604 PPA1Q15181 289 aa10.92□□□□□ -0.66
SHMT2-214ENST00000554604 ZNF404Q494X3 552 aa10.92□□□□□ -0.66
SHMT2-214ENST00000554604 ZNF362Q5T0B9 420 aaPredicted RBP10.92□□□□□ -0.66
SHMT2-214ENST00000554604 TMEM225Q6GV28 225 aa10.92□□□□□ -0.66
SHMT2-214ENST00000554604 DPY19L2P2Q6ZN68 376 aa10.92□□□□□ -0.66
SHMT2-214ENST00000554604 SSX8Q7RTT4 187 aa10.92□□□□□ -0.66
SHMT2-214ENST00000554604 GPAT4Q86UL3 456 aa10.92□□□□□ -0.66
SHMT2-214ENST00000554604 KLHL36Q8N4N3 616 aa10.92□□□□□ -0.66
SHMT2-214ENST00000554604 ZNF433Q8N7K0 673 aaPredicted RBP10.92□□□□□ -0.66
SHMT2-214ENST00000554604 SLC37A3Q8NCC5 494 aa10.92□□□□□ -0.66
SHMT2-214ENST00000554604 WFDC11Q8NEX6 87 aa10.92□□□□□ -0.66
SHMT2-214ENST00000554604 OR4F15Q8NGB8 312 aa10.92□□□□□ -0.66
SHMT2-214ENST00000554604 MCFD2Q8NI22 146 aa10.92□□□□□ -0.66
SHMT2-214ENST00000554604 TMEM171Q8WVE6 324 aa10.92□□□□□ -0.66
SHMT2-214ENST00000554604 PERPQ96FX8 193 aa10.92□□□□□ -0.66
SHMT2-214ENST00000554604 GPX7Q96SL4 187 aaPredicted RBP10.92□□□□□ -0.66
SHMT2-214ENST00000554604 ZNF649Q9BS31 505 aa10.92□□□□□ -0.66
SHMT2-214ENST00000554604 ERVK13-1Q9NX77 482 aa10.92□□□□□ -0.66
SHMT2-214ENST00000554604 HAO2Q9NYQ3 351 aa10.92□□□□□ -0.66
SHMT2-214ENST00000554604 UPB1Q9UBR1 384 aa10.92□□□□□ -0.66
SHMT2-214ENST00000554604 FLVCR1Q9Y5Y0 555 aa10.92□□□□□ -0.66
SHMT2-214ENST00000554604 ZFHX3Q15911 3703 aa10.92□□□□□ -0.66
SHMT2-214ENST00000554604 ALPK2Q86TB3 2170 aa10.92□□□□□ -0.66
SHMT2-214ENST00000554604 CCDC182A6NF36 153 aa10.91□□□□□ -0.66
SHMT2-214ENST00000554604 FAM183AA6NL82 134 aa10.91□□□□□ -0.66
SHMT2-214ENST00000554604 ARPC3O15145 178 aa10.91□□□□□ -0.66
SHMT2-214ENST00000554604 RAD51DO75771 328 aa10.91□□□□□ -0.66
SHMT2-214ENST00000554604 AHSA1O95433 338 aa10.91□□□□□ -0.66
SHMT2-214ENST00000554604 TSPAN19P0C672 248 aa10.91□□□□□ -0.66
SHMT2-214ENST00000554604 PRPS1P60891 318 aa10.91□□□□□ -0.66
SHMT2-214ENST00000554604 BDH1Q02338 343 aa10.91□□□□□ -0.66
SHMT2-214ENST00000554604 BSPH1Q075Z2 132 aa10.91□□□□□ -0.66
SHMT2-214ENST00000554604 SLC17A1Q14916 467 aa10.91□□□□□ -0.66
SHMT2-214ENST00000554604 Q5PR19 223 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms