RNA–Protein interactions for RNA: ENST00000553888.5

VIPAS39-206, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VIPAS39, Length 2,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-206ENST00000553888 UCHL1P09936 223 aa11.34□□□□□ -0.59
VIPAS39-206ENST00000553888 ATF1P18846 271 aa11.34□□□□□ -0.59
VIPAS39-206ENST00000553888 ELK1P19419 428 aa11.34□□□□□ -0.59
VIPAS39-206ENST00000553888 RAB3BP20337 219 aa11.34□□□□□ -0.59
VIPAS39-206ENST00000553888 SLC35A1P78382 337 aa11.34□□□□□ -0.59
VIPAS39-206ENST00000553888 EGR3Q06889 387 aa11.34□□□□□ -0.59
VIPAS39-206ENST00000553888 FOXO1Q12778 655 aa11.34□□□□□ -0.59
VIPAS39-206ENST00000553888 ABHD17BQ5VST6 288 aa11.34□□□□□ -0.59
VIPAS39-206ENST00000553888 NOXO1Q8NFA2 376 aa11.34□□□□□ -0.59
VIPAS39-206ENST00000553888 BRD7Q9NPI1 651 aa11.34□□□□□ -0.59
VIPAS39-206ENST00000553888 FREM1Q5H8C1 2179 aa11.34□□□□□ -0.59
VIPAS39-206ENST00000553888 TRAV6A0A075B6T7 132 aa11.33□□□□□ -0.6
VIPAS39-206ENST00000553888 ARGFXA6NJG6 315 aa11.33□□□□□ -0.6
VIPAS39-206ENST00000553888 EIF4EP06730 217 aaKnown RBP11.33□□□□□ -0.6
VIPAS39-206ENST00000553888 SNRPBP14678 240 aaKnown RBP11.33□□□□□ -0.6
VIPAS39-206ENST00000553888 ZNF823P16415 610 aa11.33□□□□□ -0.6
VIPAS39-206ENST00000553888 PRKACBP22694 351 aa11.33□□□□□ -0.6
VIPAS39-206ENST00000553888 H3F3AP84243 136 aa11.33□□□□□ -0.6
VIPAS39-206ENST00000553888 ZNF181Q2M3W8 571 aa11.33□□□□□ -0.6
VIPAS39-206ENST00000553888 HSD17B12Q53GQ0 312 aa11.33□□□□□ -0.6
VIPAS39-206ENST00000553888 HBMQ6B0K9 141 aa11.33□□□□□ -0.6
VIPAS39-206ENST00000553888 DNAAF1Q8NEP3 725 aa11.33□□□□□ -0.6
VIPAS39-206ENST00000553888 DERL3Q96Q80 235 aa11.33□□□□□ -0.6
VIPAS39-206ENST00000553888 PIGQQ9BRB3 760 aa11.33□□□□□ -0.6
VIPAS39-206ENST00000553888 TTYH2Q9BSA4 534 aa11.33□□□□□ -0.6
VIPAS39-206ENST00000553888 TMEM14AQ9Y6G1 99 aa11.33□□□□□ -0.6
VIPAS39-206ENST00000553888 FAM186AA6NE01 2351 aa11.33□□□□□ -0.6
VIPAS39-206ENST00000553888 KHDRBS3O75525 346 aaKnown RBP11.33□□□□□ -0.6
VIPAS39-206ENST00000553888 PMS2P2O95744 297 aa11.33□□□□□ -0.6
VIPAS39-206ENST00000553888 SRD5A2P31213 254 aa11.33□□□□□ -0.6
VIPAS39-206ENST00000553888 CAPZA2P47755 286 aa11.33□□□□□ -0.6
VIPAS39-206ENST00000553888 OR1C1Q15619 314 aa11.33□□□□□ -0.6
VIPAS39-206ENST00000553888 UNQ9370/PRO34162Q6UXP9 181 aa11.33□□□□□ -0.6
VIPAS39-206ENST00000553888 ZNF679Q8IYX0 411 aa11.33□□□□□ -0.6
VIPAS39-206ENST00000553888 ZNF433Q8N7K0 673 aaPredicted RBP11.33□□□□□ -0.6
VIPAS39-206ENST00000553888 ZNF676Q8N7Q3 588 aa11.33□□□□□ -0.6
VIPAS39-206ENST00000553888 SPERTQ8NA61 448 aa11.33□□□□□ -0.6
VIPAS39-206ENST00000553888 ST7LQ8TDW4 575 aa11.33□□□□□ -0.6
VIPAS39-206ENST00000553888 SLC25A44Q96H78 314 aaPredicted RBP11.33□□□□□ -0.6
VIPAS39-206ENST00000553888 CENPMQ9NSP4 180 aa11.33□□□□□ -0.6
VIPAS39-206ENST00000553888 TRAPPC4Q9Y296 219 aa11.33□□□□□ -0.6
VIPAS39-206ENST00000553888 NPIPB13A6NJU9 1138 aa11.32□□□□□ -0.6
VIPAS39-206ENST00000553888 FAM166BA8MTA8 275 aa11.32□□□□□ -0.6
VIPAS39-206ENST00000553888 NPIPB4C9JG80 1138 aa11.32□□□□□ -0.6
VIPAS39-206ENST00000553888 SERPINA3P01011 423 aa11.32□□□□□ -0.6
VIPAS39-206ENST00000553888 IGHG1P01857 330 aa11.32□□□□□ -0.6
VIPAS39-206ENST00000553888 HNRNPCP07910 306 aaKnown RBP eCLIP11.32□□□□□ -0.6
VIPAS39-206ENST00000553888 WT1P19544 449 aaPredicted RBP11.32□□□□□ -0.6
VIPAS39-206ENST00000553888 SRMP19623 302 aa11.32□□□□□ -0.6
VIPAS39-206ENST00000553888 ANOS1P23352 680 aa11.32□□□□□ -0.6
VIPAS39-206ENST00000553888 CLDN15P56746 228 aa11.32□□□□□ -0.6
VIPAS39-206ENST00000553888 CLDN12P56749 244 aa11.32□□□□□ -0.6
VIPAS39-206ENST00000553888 RAC1P63000 192 aa11.32□□□□□ -0.6
VIPAS39-206ENST00000553888 LRFN4Q6PJG9 635 aa11.32□□□□□ -0.6
VIPAS39-206ENST00000553888 ESPNLQ6ZVH7 1005 aa11.32□□□□□ -0.6
VIPAS39-206ENST00000553888 KCTD20Q7Z5Y7 419 aa11.32□□□□□ -0.6
VIPAS39-206ENST00000553888 GGNQ86UU5 652 aa11.32□□□□□ -0.6
VIPAS39-206ENST00000553888 DTX1Q86Y01 620 aa11.32□□□□□ -0.6
VIPAS39-206ENST00000553888 SAMD12Q8N8I0 201 aa11.32□□□□□ -0.6
VIPAS39-206ENST00000553888 ADPRHL1Q8NDY3 354 aa11.32□□□□□ -0.6
VIPAS39-206ENST00000553888 OR52N5Q8NH56 324 aa11.32□□□□□ -0.6
VIPAS39-206ENST00000553888 ROBO4Q8WZ75 1007 aa11.32□□□□□ -0.6
VIPAS39-206ENST00000553888 MCHR2Q969V1 340 aa11.32□□□□□ -0.6
VIPAS39-206ENST00000553888 C4orf45Q96LM5 186 aa11.32□□□□□ -0.6
VIPAS39-206ENST00000553888 SFXN2Q96NB2 322 aa11.32□□□□□ -0.6
VIPAS39-206ENST00000553888 RBP7Q96R05 134 aa11.32□□□□□ -0.6
VIPAS39-206ENST00000553888 FAIMQ9NVQ4 179 aa11.32□□□□□ -0.6
VIPAS39-206ENST00000553888 TBC1D24Q9ULP9 559 aa11.32□□□□□ -0.6
VIPAS39-206ENST00000553888 FAM25AB3EWG3 89 aa11.32□□□□□ -0.6
VIPAS39-206ENST00000553888 FAM25CB3EWG5 89 aa11.32□□□□□ -0.6
VIPAS39-206ENST00000553888 FAM25GB3EWG6 89 aa11.32□□□□□ -0.6
VIPAS39-206ENST00000553888 NKX2-8O15522 239 aa11.32□□□□□ -0.6
VIPAS39-206ENST00000553888 QDPRP09417 244 aa11.32□□□□□ -0.6
VIPAS39-206ENST00000553888 PPP3R1P63098 170 aa11.32□□□□□ -0.6
VIPAS39-206ENST00000553888 PYDC2Q56P42 97 aa11.32□□□□□ -0.6
VIPAS39-206ENST00000553888 HES5Q5TA89 166 aa11.32□□□□□ -0.6
VIPAS39-206ENST00000553888 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.32□□□□□ -0.6
VIPAS39-206ENST00000553888 GLB1L2Q8IW92 636 aa11.32□□□□□ -0.6
VIPAS39-206ENST00000553888 SULF2Q8IWU5 870 aa11.32□□□□□ -0.6
VIPAS39-206ENST00000553888 LRFN3Q9BTN0 628 aa11.32□□□□□ -0.6
VIPAS39-206ENST00000553888 ATPIF1Q9UII2 106 aa11.32□□□□□ -0.6
VIPAS39-206ENST00000553888 EMC9Q9Y3B6 208 aa11.32□□□□□ -0.6
VIPAS39-206ENST00000553888 TRAV8-7A0A075B6U6 113 aa11.32□□□□□ -0.6
VIPAS39-206ENST00000553888 A0A1W2PQ09 198 aa11.32□□□□□ -0.6
VIPAS39-206ENST00000553888 SMAD9O15198 467 aaKnown RBP11.32□□□□□ -0.6
VIPAS39-206ENST00000553888 GPRIN2O60269 458 aa11.32□□□□□ -0.6
VIPAS39-206ENST00000553888 CNR1P21554 472 aa11.32□□□□□ -0.6
VIPAS39-206ENST00000553888 NTF4P34130 210 aa11.32□□□□□ -0.6
VIPAS39-206ENST00000553888 SELENOPP49908 381 aa11.32□□□□□ -0.6
VIPAS39-206ENST00000553888 YIF1BQ5BJH7 314 aa11.32□□□□□ -0.6
VIPAS39-206ENST00000553888 DNM1P34Q6PK57 102 aa11.32□□□□□ -0.6
VIPAS39-206ENST00000553888 CFAP77Q6ZQR2 320 aa11.32□□□□□ -0.6
VIPAS39-206ENST00000553888 UBE2J2Q8N2K1 259 aa11.32□□□□□ -0.6
VIPAS39-206ENST00000553888 OR2M7Q8NG81 312 aa11.32□□□□□ -0.6
VIPAS39-206ENST00000553888 OR10S1Q8NGN2 331 aa11.32□□□□□ -0.6
VIPAS39-206ENST00000553888 TRMT10AQ8TBZ6 339 aaKnown RBP11.32□□□□□ -0.6
VIPAS39-206ENST00000553888 ZNF845Q96IR2 970 aaPredicted RBP11.32□□□□□ -0.6
VIPAS39-206ENST00000553888 UTP23Q9BRU9 249 aaKnown RBP11.32□□□□□ -0.6
VIPAS39-206ENST00000553888 ZFP64Q9NPA5 681 aa11.32□□□□□ -0.6
VIPAS39-206ENST00000553888 ASCL3Q9NQ33 180 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms