RNA–Protein interactions for RNA: ENST00000553290.1

ACTN1-207, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 619 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-207ENST00000553290 MNAT1P51948 309 aa11.09□□□□□ -0.63
ACTN1-207ENST00000553290 ERVS71-1P61550 626 aa11.09□□□□□ -0.63
ACTN1-207ENST00000553290 LCN6P62502 163 aa11.09□□□□□ -0.63
ACTN1-207ENST00000553290 PCGF3Q3KNV8 242 aa11.09□□□□□ -0.63
ACTN1-207ENST00000553290 ZNF718Q3SXZ3 478 aa11.09□□□□□ -0.63
ACTN1-207ENST00000553290 MCUR1Q96AQ8 359 aa11.09□□□□□ -0.63
ACTN1-207ENST00000553290 RSRC1Q96IZ7 334 aaKnown RBP11.09□□□□□ -0.63
ACTN1-207ENST00000553290 ZNF416Q9BWM5 594 aa11.09□□□□□ -0.63
ACTN1-207ENST00000553290 SHARPINQ9H0F6 387 aa11.09□□□□□ -0.63
ACTN1-207ENST00000553290 WNT5BQ9H1J7 359 aa11.09□□□□□ -0.63
ACTN1-207ENST00000553290 NRIP3Q9NQ35 241 aa11.09□□□□□ -0.63
ACTN1-207ENST00000553290 POLE4Q9NR33 117 aa11.09□□□□□ -0.63
ACTN1-207ENST00000553290 ARL8BQ9NVJ2 186 aa11.09□□□□□ -0.63
ACTN1-207ENST00000553290 NKIRAS2Q9NYR9 191 aa11.09□□□□□ -0.63
ACTN1-207ENST00000553290 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.09□□□□□ -0.635e-7■■■■□ 21
ACTN1-207ENST00000553290 TEX13CA0A0J9YWL9 993 aa11.08□□□□□ -0.64
ACTN1-207ENST00000553290 LRP5LA4QPB2 252 aa11.08□□□□□ -0.64
ACTN1-207ENST00000553290 UNC119BA6NIH7 251 aa11.08□□□□□ -0.64
ACTN1-207ENST00000553290 C17orf100A8MU93 164 aa11.08□□□□□ -0.64
ACTN1-207ENST00000553290 ARPC2O15144 300 aa11.08□□□□□ -0.64
ACTN1-207ENST00000553290 GADD45GO95257 159 aa11.08□□□□□ -0.64
ACTN1-207ENST00000553290 TGFAP01135 160 aa11.08□□□□□ -0.64
ACTN1-207ENST00000553290 SEMG1P04279 462 aa11.08□□□□□ -0.64
ACTN1-207ENST00000553290 COX5BP10606 129 aa11.08□□□□□ -0.64
ACTN1-207ENST00000553290 COL8A2P25067 703 aa11.08□□□□□ -0.64
ACTN1-207ENST00000553290 GCH1P30793 250 aa11.08□□□□□ -0.64
ACTN1-207ENST00000553290 WNT5AP41221 380 aa11.08□□□□□ -0.64
ACTN1-207ENST00000553290 GPR6P46095 362 aaPredicted RBP11.08□□□□□ -0.64
ACTN1-207ENST00000553290 RPS6KA3P51812 740 aa11.08□□□□□ -0.64
ACTN1-207ENST00000553290 TMEM33P57088 247 aa11.08□□□□□ -0.64
ACTN1-207ENST00000553290 MXRA7P84157 204 aa11.08□□□□□ -0.64
ACTN1-207ENST00000553290 KRR1Q13601 381 aaKnown RBP11.08□□□□□ -0.64
ACTN1-207ENST00000553290 ENDOGQ14249 297 aaKnown RBP11.08□□□□□ -0.64
ACTN1-207ENST00000553290 SEC23BQ15437 767 aa11.08□□□□□ -0.64
ACTN1-207ENST00000553290 ALKBH6Q3KRA9 238 aa11.08□□□□□ -0.64
ACTN1-207ENST00000553290 ARL9Q6T311 187 aa11.08□□□□□ -0.64
ACTN1-207ENST00000553290 DPY19L2P2Q6ZN68 376 aa11.08□□□□□ -0.64
ACTN1-207ENST00000553290 ADCK1Q86TW2 530 aa11.08□□□□□ -0.64
ACTN1-207ENST00000553290 DEFB107AQ8IZN7 70 aa11.08□□□□□ -0.64
ACTN1-207ENST00000553290 OR52J3Q8NH60 311 aa11.08□□□□□ -0.64
ACTN1-207ENST00000553290 SNX18Q96RF0 628 aa11.08□□□□□ -0.64
ACTN1-207ENST00000553290 FUZQ9BT04 418 aa11.08□□□□□ -0.64
ACTN1-207ENST00000553290 ELOVL3Q9HB03 270 aa11.08□□□□□ -0.64
ACTN1-207ENST00000553290 NDRG4Q9ULP0 352 aaKnown RBP11.08□□□□□ -0.64
ACTN1-207ENST00000553290 V9GYQ6 96 aa11.08□□□□□ -0.64
ACTN1-207ENST00000553290 FBN1P35555 2871 aaKnown RBP11.07□□□□□ -0.64
ACTN1-207ENST00000553290 H3BSA7 217 aa11.07□□□□□ -0.64
ACTN1-207ENST00000553290 ICMTO60725 284 aa11.07□□□□□ -0.64
ACTN1-207ENST00000553290 KHDRBS3O75525 346 aaKnown RBP11.07□□□□□ -0.64
ACTN1-207ENST00000553290 NCR1O76036 304 aa11.07□□□□□ -0.64
ACTN1-207ENST00000553290 TXNDC12O95881 172 aa11.07□□□□□ -0.64
ACTN1-207ENST00000553290 FABP3P05413 133 aa11.07□□□□□ -0.64
ACTN1-207ENST00000553290 CTLA4P16410 223 aa11.07□□□□□ -0.64
ACTN1-207ENST00000553290 HNF1AP20823 631 aa11.07□□□□□ -0.64
ACTN1-207ENST00000553290 IGFBP5P24593 272 aa11.07□□□□□ -0.64
ACTN1-207ENST00000553290 MSX2P35548 267 aaPredicted RBP11.07□□□□□ -0.64
ACTN1-207ENST00000553290 IFNGR2P38484 337 aa11.07□□□□□ -0.64
ACTN1-207ENST00000553290 MAGEB1P43366 347 aa11.07□□□□□ -0.64
ACTN1-207ENST00000553290 ARHGDIAP52565 204 aa11.07□□□□□ -0.64
ACTN1-207ENST00000553290 SPIBQ01892 262 aa11.07□□□□□ -0.64
ACTN1-207ENST00000553290 TEKQ02763 1124 aa11.07□□□□□ -0.64
ACTN1-207ENST00000553290 SCRN3Q0VDG4 424 aa11.07□□□□□ -0.64
ACTN1-207ENST00000553290 MBNL2Q5VZF2 373 aaKnown RBP11.07□□□□□ -0.64
ACTN1-207ENST00000553290 ZNF774Q6NX45 483 aa11.07□□□□□ -0.64
ACTN1-207ENST00000553290 SMARCD3Q6STE5 483 aa11.07□□□□□ -0.64
ACTN1-207ENST00000553290 THSD4Q6ZMP0 1018 aa11.07□□□□□ -0.64
ACTN1-207ENST00000553290 GLB1L2Q8IW92 636 aa11.07□□□□□ -0.64
ACTN1-207ENST00000553290 ZNF101Q8IZC7 436 aa11.07□□□□□ -0.64
ACTN1-207ENST00000553290 ABHD4Q8TB40 342 aa11.07□□□□□ -0.64
ACTN1-207ENST00000553290 YIPF5Q969M3 257 aa11.07□□□□□ -0.64
ACTN1-207ENST00000553290 RASD2Q96D21 266 aa11.07□□□□□ -0.64
ACTN1-207ENST00000553290 MARS2Q96GW9 593 aaKnown RBP11.07□□□□□ -0.64
ACTN1-207ENST00000553290 C4orf45Q96LM5 186 aa11.07□□□□□ -0.64
ACTN1-207ENST00000553290 MDFIQ99750 246 aa11.07□□□□□ -0.64
ACTN1-207ENST00000553290 SOX7Q9BT81 388 aa11.07□□□□□ -0.64
ACTN1-207ENST00000553290 SYT4Q9H2B2 425 aa11.07□□□□□ -0.64
ACTN1-207ENST00000553290 EMC7Q9NPA0 242 aa11.07□□□□□ -0.64
ACTN1-207ENST00000553290 IL1RAPQ9NPH3 570 aa11.07□□□□□ -0.64
ACTN1-207ENST00000553290 ZNF275Q9NSD4 429 aaPredicted RBP11.07□□□□□ -0.64
ACTN1-207ENST00000553290 VSX1Q9NZR4 365 aaPredicted RBP11.07□□□□□ -0.64
ACTN1-207ENST00000553290 IL20RAQ9UHF4 553 aa11.07□□□□□ -0.64
ACTN1-207ENST00000553290 IER3IP1Q9Y5U9 82 aa11.07□□□□□ -0.64
ACTN1-207ENST00000553290 ATRQ13535 2644 aa11.07□□□□□ -0.64
ACTN1-207ENST00000553290 SOCS2O14508 198 aa11.06□□□□□ -0.64
ACTN1-207ENST00000553290 IMPA2O14732 288 aa11.06□□□□□ -0.64
ACTN1-207ENST00000553290 SLC16A7O60669 478 aa11.06□□□□□ -0.64
ACTN1-207ENST00000553290 SCG5P05408 212 aa11.06□□□□□ -0.64
ACTN1-207ENST00000553290 TUBG1P23258 451 aa11.06□□□□□ -0.64
ACTN1-207ENST00000553290 IL2RGP31785 369 aa11.06□□□□□ -0.64
ACTN1-207ENST00000553290 LIPAP38571 399 aa11.06□□□□□ -0.64
ACTN1-207ENST00000553290 FXYD6P3P58550 94 aa11.06□□□□□ -0.64
ACTN1-207ENST00000553290 PPP1CBP62140 327 aa11.06□□□□□ -0.64
ACTN1-207ENST00000553290 LSM6P62312 80 aaKnown RBP11.06□□□□□ -0.64
ACTN1-207ENST00000553290 CCL8P80075 99 aa11.06□□□□□ -0.64
ACTN1-207ENST00000553290 TRIP10Q15642 601 aa11.06□□□□□ -0.64
ACTN1-207ENST00000553290 SPATA46Q5T0L3 261 aa11.06□□□□□ -0.64
ACTN1-207ENST00000553290 ZER1Q7Z7L7 766 aa11.06□□□□□ -0.64
ACTN1-207ENST00000553290 LINC01356Q8N9X3 169 aa11.06□□□□□ -0.64
ACTN1-207ENST00000553290 SLC25A40Q8TBP6 338 aa11.06□□□□□ -0.64
ACTN1-207ENST00000553290 KLF14Q8TD94 323 aaPredicted RBP11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms