RNA–Protein interactions for RNA: ENST00000553011.5

PTCH1-226, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 1,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-226ENST00000553011 TTKP33981 857 aa12.21□□□□□ -0.45
PTCH1-226ENST00000553011 GRK5P34947 590 aa12.21□□□□□ -0.45
PTCH1-226ENST00000553011 PLP2Q04941 152 aa12.21□□□□□ -0.45
PTCH1-226ENST00000553011 ZSCAN26Q16670 478 aa12.21□□□□□ -0.45
PTCH1-226ENST00000553011 KRT80Q6KB66 452 aa12.21□□□□□ -0.45
PTCH1-226ENST00000553011 SLC27A4Q6P1M0 643 aa12.21□□□□□ -0.45
PTCH1-226ENST00000553011 ZFP1Q6P2D0 407 aa12.21□□□□□ -0.45
PTCH1-226ENST00000553011 VHLLQ6RSH7 139 aa12.21□□□□□ -0.45
PTCH1-226ENST00000553011 DTX2Q86UW9 622 aa12.21□□□□□ -0.45
PTCH1-226ENST00000553011 ZBTB46Q86UZ6 589 aa12.21□□□□□ -0.45
PTCH1-226ENST00000553011 ZDHHC13Q8IUH4 622 aa12.21□□□□□ -0.45
PTCH1-226ENST00000553011 ICA1LQ8NDH6 482 aa12.21□□□□□ -0.45
PTCH1-226ENST00000553011 CPEB3Q8NE35 698 aaKnown RBP12.21□□□□□ -0.45
PTCH1-226ENST00000553011 SLC30A7Q8NEW0 376 aa12.21□□□□□ -0.45
PTCH1-226ENST00000553011 OR4F15Q8NGB8 312 aa12.21□□□□□ -0.45
PTCH1-226ENST00000553011 OR9Q1Q8NGQ5 310 aa12.21□□□□□ -0.45
PTCH1-226ENST00000553011 TMEM171Q8WVE6 324 aa12.21□□□□□ -0.45
PTCH1-226ENST00000553011 ZNRF4Q8WWF5 429 aa12.21□□□□□ -0.45
PTCH1-226ENST00000553011 TRAF4Q9BUZ4 470 aaPredicted RBP12.21□□□□□ -0.45
PTCH1-226ENST00000553011 RBM4Q9BWF3 364 aaKnown RBP12.21□□□□□ -0.45
PTCH1-226ENST00000553011 OR2H1Q9GZK4 316 aa12.21□□□□□ -0.45
PTCH1-226ENST00000553011 GABARAPL1Q9H0R8 117 aa12.21□□□□□ -0.45
PTCH1-226ENST00000553011 CA10Q9NS85 328 aa12.21□□□□□ -0.45
PTCH1-226ENST00000553011 BEX4Q9NWD9 120 aaPredicted RBP12.21□□□□□ -0.45
PTCH1-226ENST00000553011 KLHL21Q9UJP4 597 aa12.21□□□□□ -0.45
PTCH1-226ENST00000553011 OAZ3Q9UMX2 235 aa12.21□□□□□ -0.45
PTCH1-226ENST00000553011 HIVEP1P15822 2718 aa12.21□□□□□ -0.46
PTCH1-226ENST00000553011 IQCMA0A1B0GVH7 501 aa12.2□□□□□ -0.46
PTCH1-226ENST00000553011 RIIAD1A6NNX1 92 aa12.2□□□□□ -0.46
PTCH1-226ENST00000553011 ANKRD65E5RJM6 399 aa12.2□□□□□ -0.46
PTCH1-226ENST00000553011 IFNGP01579 166 aa12.2□□□□□ -0.46
PTCH1-226ENST00000553011 TFP02787 698 aa12.2□□□□□ -0.46
PTCH1-226ENST00000553011 GYPBP06028 91 aa12.2□□□□□ -0.46
PTCH1-226ENST00000553011 NR4A1P22736 598 aa12.2□□□□□ -0.46
PTCH1-226ENST00000553011 THBS4P35443 961 aa12.2□□□□□ -0.46
PTCH1-226ENST00000553011 CRISP1P54107 249 aa12.2□□□□□ -0.46
PTCH1-226ENST00000553011 PCBD1P61457 104 aa12.2□□□□□ -0.46
PTCH1-226ENST00000553011 LSM6P62312 80 aaKnown RBP12.2□□□□□ -0.46
PTCH1-226ENST00000553011 NKX6-1P78426 367 aaPredicted RBP12.2□□□□□ -0.46
PTCH1-226ENST00000553011 CDK5Q00535 292 aa12.2□□□□□ -0.46
PTCH1-226ENST00000553011 SNTB2Q13425 540 aaKnown RBP12.2□□□□□ -0.46
PTCH1-226ENST00000553011 DAG1Q14118 895 aa12.2□□□□□ -0.46
PTCH1-226ENST00000553011 KCNMB1Q16558 191 aa12.2□□□□□ -0.46
PTCH1-226ENST00000553011 TMEM236Q5W0B7 351 aa12.2□□□□□ -0.46
PTCH1-226ENST00000553011 ZNF774Q6NX45 483 aa12.2□□□□□ -0.46
PTCH1-226ENST00000553011 ZNF544Q6NX49 715 aa12.2□□□□□ -0.46
PTCH1-226ENST00000553011 FBXL14Q8N1E6 418 aa12.2□□□□□ -0.46
PTCH1-226ENST00000553011 MUC15Q8N387 334 aa12.2□□□□□ -0.46
PTCH1-226ENST00000553011 SVOPLQ8N434 492 aa12.2□□□□□ -0.46
PTCH1-226ENST00000553011 NUP37Q8NFH4 326 aa12.2□□□□□ -0.46
PTCH1-226ENST00000553011 SLC26A10Q8NG04 563 aa12.2□□□□□ -0.46
PTCH1-226ENST00000553011 OR51L1Q8NGJ5 315 aa12.2□□□□□ -0.46
PTCH1-226ENST00000553011 DNAJC9Q8WXX5 260 aa12.2□□□□□ -0.46
PTCH1-226ENST00000553011 FOXC2Q99958 501 aa12.2□□□□□ -0.46
PTCH1-226ENST00000553011 NMNAT2Q9BZQ4 307 aa12.2□□□□□ -0.46
PTCH1-226ENST00000553011 MED20Q9H944 212 aa12.2□□□□□ -0.46
PTCH1-226ENST00000553011 CDH20Q9HBT6 801 aa12.2□□□□□ -0.46
PTCH1-226ENST00000553011 S100A14Q9HCY8 104 aa12.2□□□□□ -0.46
PTCH1-226ENST00000553011 CMC2Q9NRP2 79 aa12.2□□□□□ -0.46
PTCH1-226ENST00000553011 KRT84Q9NSB2 600 aa12.2□□□□□ -0.46
PTCH1-226ENST00000553011 FAIMQ9NVQ4 179 aa12.2□□□□□ -0.46
PTCH1-226ENST00000553011 ASH2LQ9UBL3 628 aa12.2□□□□□ -0.46
PTCH1-226ENST00000553011 TIMM10BQ9Y5J6 103 aa12.2□□□□□ -0.46
PTCH1-226ENST00000553011 LOC100509620A0A075B734 347 aa12.19□□□□□ -0.46
PTCH1-226ENST00000553011 FAM183AA6NL82 134 aa12.19□□□□□ -0.46
PTCH1-226ENST00000553011 GPRIN2O60269 458 aa12.19□□□□□ -0.46
PTCH1-226ENST00000553011 SMPD2O60906 423 aa12.19□□□□□ -0.46
PTCH1-226ENST00000553011 PTHP01270 115 aa12.19□□□□□ -0.46
PTCH1-226ENST00000553011 HLA-DQA2P01906 255 aa12.19□□□□□ -0.46
PTCH1-226ENST00000553011 CLUP10909 449 aa12.19□□□□□ -0.46
PTCH1-226ENST00000553011 ZNF3P17036 446 aa12.19□□□□□ -0.46
PTCH1-226ENST00000553011 APOBEC3AP31941 199 aaPredicted RBP12.19□□□□□ -0.46
PTCH1-226ENST00000553011 APLNRP35414 380 aa12.19□□□□□ -0.46
PTCH1-226ENST00000553011 CDKN1AP38936 164 aa12.19□□□□□ -0.46
PTCH1-226ENST00000553011 GLO1Q04760 184 aa12.19□□□□□ -0.46
PTCH1-226ENST00000553011 AQP6Q13520 282 aa12.19□□□□□ -0.46
PTCH1-226ENST00000553011 TESK1Q15569 626 aa12.19□□□□□ -0.46
PTCH1-226ENST00000553011 MSMPQ1L6U9 139 aa12.19□□□□□ -0.46
PTCH1-226ENST00000553011 TBC1D28Q2M2D7 210 aa12.19□□□□□ -0.46
PTCH1-226ENST00000553011 AGAP6Q5VW22 663 aa12.19□□□□□ -0.46
PTCH1-226ENST00000553011 KDM4DQ6B0I6 523 aa12.19□□□□□ -0.46
PTCH1-226ENST00000553011 C11orf71Q6IPW1 123 aa12.19□□□□□ -0.46
PTCH1-226ENST00000553011 LYPD4Q6UWN0 246 aa12.19□□□□□ -0.46
PTCH1-226ENST00000553011 SYT9Q86SS6 491 aa12.19□□□□□ -0.46
PTCH1-226ENST00000553011 C10orf67Q8IYJ2 551 aa12.19□□□□□ -0.46
PTCH1-226ENST00000553011 PARP8Q8N3A8 854 aa12.19□□□□□ -0.46
PTCH1-226ENST00000553011 PROKR2Q8NFJ6 384 aa12.19□□□□□ -0.46
PTCH1-226ENST00000553011 OR2T4Q8NH00 348 aa12.19□□□□□ -0.46
PTCH1-226ENST00000553011 POM121L2Q96KW2 1035 aa12.19□□□□□ -0.46
PTCH1-226ENST00000553011 HCAR1Q9BXC0 346 aa12.19□□□□□ -0.46
PTCH1-226ENST00000553011 C1orf198Q9H425 327 aa12.19□□□□□ -0.46
PTCH1-226ENST00000553011 SLC25A19Q9HC21 320 aa12.19□□□□□ -0.46
PTCH1-226ENST00000553011 CBLN4Q9NTU7 201 aa12.19□□□□□ -0.46
PTCH1-226ENST00000553011 MRPL22Q9NWU5 206 aaKnown RBP12.19□□□□□ -0.46
PTCH1-226ENST00000553011 TMEFF2Q9UIK5 374 aaPredicted RBP12.19□□□□□ -0.46
PTCH1-226ENST00000553011 POLR1DQ9Y2S0 133 aa12.19□□□□□ -0.46
PTCH1-226ENST00000553011 CELSR1Q9NYQ6 3014 aa12.19□□□□□ -0.46
PTCH1-226ENST00000553011 AKAP9Q99996 3911 aa12.19□□□□□ -0.46
PTCH1-226ENST00000553011 TVP23AA6NH52 213 aa12.18□□□□□ -0.46
PTCH1-226ENST00000553011 OVOL3O00110 214 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms