RNA–Protein interactions for RNA: ENST00000552896.1

TRAFD1-209, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 3

Gene TRAFD1, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-209ENST00000552896 TTKP33981 857 aa10.14□□□□□ -0.79
TRAFD1-209ENST00000552896 ART1P52961 327 aa10.14□□□□□ -0.79
TRAFD1-209ENST00000552896 LSM6P62312 80 aaKnown RBP10.14□□□□□ -0.79
TRAFD1-209ENST00000552896 NKX6-1P78426 367 aaPredicted RBP10.14□□□□□ -0.79
TRAFD1-209ENST00000552896 SCRN3Q0VDG4 424 aa10.14□□□□□ -0.79
TRAFD1-209ENST00000552896 KCNMB1Q16558 191 aa10.14□□□□□ -0.79
TRAFD1-209ENST00000552896 TBC1D28Q2M2D7 210 aa10.14□□□□□ -0.79
TRAFD1-209ENST00000552896 PABPC1L2AQ5JQF8 200 aa10.14□□□□□ -0.79
TRAFD1-209ENST00000552896 SLC35F1Q5T1Q4 408 aa10.14□□□□□ -0.79
TRAFD1-209ENST00000552896 AGAP6Q5VW22 663 aa10.14□□□□□ -0.79
TRAFD1-209ENST00000552896 C11orf71Q6IPW1 123 aa10.14□□□□□ -0.79
TRAFD1-209ENST00000552896 SLC27A4Q6P1M0 643 aa10.14□□□□□ -0.79
TRAFD1-209ENST00000552896 ZDHHC13Q8IUH4 622 aa10.14□□□□□ -0.79
TRAFD1-209ENST00000552896 C10orf67Q8IYJ2 551 aa10.14□□□□□ -0.79
TRAFD1-209ENST00000552896 OR6V1Q8N148 313 aa10.14□□□□□ -0.79
TRAFD1-209ENST00000552896 FBXL14Q8N1E6 418 aa10.14□□□□□ -0.79
TRAFD1-209ENST00000552896 LRRC75A-AS1Q8N1F1 130 aa10.14□□□□□ -0.79
TRAFD1-209ENST00000552896 SLC37A3Q8NCC5 494 aa10.14□□□□□ -0.79
TRAFD1-209ENST00000552896 SLC26A10Q8NG04 563 aa10.14□□□□□ -0.79
TRAFD1-209ENST00000552896 TSSK2Q96PF2 358 aa10.14□□□□□ -0.79
TRAFD1-209ENST00000552896 RBM4Q9BWF3 364 aaKnown RBP10.14□□□□□ -0.79
TRAFD1-209ENST00000552896 GSX2Q9BZM3 304 aa10.14□□□□□ -0.79
TRAFD1-209ENST00000552896 OR2H1Q9GZK4 316 aa10.14□□□□□ -0.79
TRAFD1-209ENST00000552896 FN3KQ9H479 309 aa10.14□□□□□ -0.79
TRAFD1-209ENST00000552896 RERGLQ9H628 205 aa10.14□□□□□ -0.79
TRAFD1-209ENST00000552896 EMC7Q9NPA0 242 aa10.14□□□□□ -0.79
TRAFD1-209ENST00000552896 PAPOLBQ9NRJ5 636 aaKnown RBP10.14□□□□□ -0.79
TRAFD1-209ENST00000552896 CMC2Q9NRP2 79 aa10.14□□□□□ -0.79
TRAFD1-209ENST00000552896 CBLN4Q9NTU7 201 aa10.14□□□□□ -0.79
TRAFD1-209ENST00000552896 B9D1Q9UPM9 204 aa10.14□□□□□ -0.79
TRAFD1-209ENST00000552896 LAMP3Q9UQV4 416 aa10.14□□□□□ -0.79
TRAFD1-209ENST00000552896 COA3Q9Y2R0 106 aaPredicted RBP10.14□□□□□ -0.79
TRAFD1-209ENST00000552896 MED13LQ71F56 2210 aa10.13□□□□□ -0.79
TRAFD1-209ENST00000552896 F8P00451 2351 aa10.13□□□□□ -0.79
TRAFD1-209ENST00000552896 H3BNX3 289 aa10.13□□□□□ -0.79
TRAFD1-209ENST00000552896 OVOL3O00110 214 aa10.13□□□□□ -0.79
TRAFD1-209ENST00000552896 SCG5P05408 212 aa10.13□□□□□ -0.79
TRAFD1-209ENST00000552896 NR4A1P22736 598 aa10.13□□□□□ -0.79
TRAFD1-209ENST00000552896 APOBEC3AP31941 199 aaPredicted RBP10.13□□□□□ -0.79
TRAFD1-209ENST00000552896 APLNRP35414 380 aa10.13□□□□□ -0.79
TRAFD1-209ENST00000552896 FABP6P51161 128 aa10.13□□□□□ -0.79
TRAFD1-209ENST00000552896 SLC25A1P53007 311 aa10.13□□□□□ -0.79
TRAFD1-209ENST00000552896 RPS23P62266 143 aaKnown RBP10.13□□□□□ -0.79
TRAFD1-209ENST00000552896 PSG4Q00888 419 aa10.13□□□□□ -0.79
TRAFD1-209ENST00000552896 GALK2Q01415 458 aa10.13□□□□□ -0.79
TRAFD1-209ENST00000552896 HGFACQ04756 655 aa10.13□□□□□ -0.79
TRAFD1-209ENST00000552896 SNTB2Q13425 540 aaKnown RBP10.13□□□□□ -0.79
TRAFD1-209ENST00000552896 DAG1Q14118 895 aa10.13□□□□□ -0.79
TRAFD1-209ENST00000552896 CRMP1Q14194 572 aa10.13□□□□□ -0.79
TRAFD1-209ENST00000552896 ZNF362Q5T0B9 420 aaPredicted RBP10.13□□□□□ -0.79
TRAFD1-209ENST00000552896 SPNS3Q6ZMD2 512 aa10.13□□□□□ -0.79
TRAFD1-209ENST00000552896 AMIGO2Q86SJ2 522 aa10.13□□□□□ -0.79
TRAFD1-209ENST00000552896 MUC15Q8N387 334 aa10.13□□□□□ -0.79
TRAFD1-209ENST00000552896 IQCF1Q8N6M8 205 aa10.13□□□□□ -0.79
TRAFD1-209ENST00000552896 CYB561A3Q8NBI2 242 aa10.13□□□□□ -0.79
TRAFD1-209ENST00000552896 OR1J2Q8NGS2 313 aa10.13□□□□□ -0.79
TRAFD1-209ENST00000552896 OR2T4Q8NH00 348 aa10.13□□□□□ -0.79
TRAFD1-209ENST00000552896 FOXN4Q96NZ1 517 aa10.13□□□□□ -0.79
TRAFD1-209ENST00000552896 DDOQ99489 341 aa10.13□□□□□ -0.79
TRAFD1-209ENST00000552896 OSBPL10Q9BXB5 764 aa10.13□□□□□ -0.79
TRAFD1-209ENST00000552896 NMNAT2Q9BZQ4 307 aa10.13□□□□□ -0.79
TRAFD1-209ENST00000552896 WNT5BQ9H1J7 359 aa10.13□□□□□ -0.79
TRAFD1-209ENST00000552896 CDH20Q9HBT6 801 aa10.13□□□□□ -0.79
TRAFD1-209ENST00000552896 SLC25A19Q9HC21 320 aa10.13□□□□□ -0.79
TRAFD1-209ENST00000552896 KRT84Q9NSB2 600 aa10.13□□□□□ -0.79
TRAFD1-209ENST00000552896 ZNF701Q9NV72 531 aaPredicted RBP10.13□□□□□ -0.79
TRAFD1-209ENST00000552896 ENOPH1Q9UHY7 261 aa10.13□□□□□ -0.79
TRAFD1-209ENST00000552896 ATPIF1Q9UII2 106 aa10.13□□□□□ -0.79
TRAFD1-209ENST00000552896 POLR1DQ9Y2S0 133 aa10.13□□□□□ -0.79
TRAFD1-209ENST00000552896 SPEF1Q9Y4P9 236 aa10.13□□□□□ -0.79
TRAFD1-209ENST00000552896 TIMM10BQ9Y5J6 103 aa10.13□□□□□ -0.79
TRAFD1-209ENST00000552896 HIVEP1P15822 2718 aa10.13□□□□□ -0.79
TRAFD1-209ENST00000552896 SGCEO43556 437 aa10.12□□□□□ -0.79
TRAFD1-209ENST00000552896 DOK2O60496 412 aa10.12□□□□□ -0.79
TRAFD1-209ENST00000552896 ICMTO60725 284 aa10.12□□□□□ -0.79
TRAFD1-209ENST00000552896 CD8AP01732 235 aa10.12□□□□□ -0.79
TRAFD1-209ENST00000552896 COX5BP10606 129 aa10.12□□□□□ -0.79
TRAFD1-209ENST00000552896 STOMP27105 288 aa10.12□□□□□ -0.79
TRAFD1-209ENST00000552896 APEX1P27695 318 aaKnown RBP10.12□□□□□ -0.79
TRAFD1-209ENST00000552896 PCSK6P29122 969 aa10.12□□□□□ -0.79
TRAFD1-209ENST00000552896 PTH2RP49190 550 aa10.12□□□□□ -0.79
TRAFD1-209ENST00000552896 DAPP51397 102 aa10.12□□□□□ -0.79
TRAFD1-209ENST00000552896 CDK5Q00535 292 aa10.12□□□□□ -0.79
TRAFD1-209ENST00000552896 EFNB3Q15768 340 aa10.12□□□□□ -0.79
TRAFD1-209ENST00000552896 ADIPOQQ15848 244 aa10.12□□□□□ -0.79
TRAFD1-209ENST00000552896 KDM4DQ6B0I6 523 aa10.12□□□□□ -0.79
TRAFD1-209ENST00000552896 KRT80Q6KB66 452 aa10.12□□□□□ -0.79
TRAFD1-209ENST00000552896 UGT2A3Q6UWM9 527 aa10.12□□□□□ -0.79
TRAFD1-209ENST00000552896 ALDH16A1Q8IZ83 802 aa10.12□□□□□ -0.79
TRAFD1-209ENST00000552896 CPEB3Q8NE35 698 aaKnown RBP10.12□□□□□ -0.79
TRAFD1-209ENST00000552896 PROKR2Q8NFJ6 384 aa10.12□□□□□ -0.79
TRAFD1-209ENST00000552896 AKR7LQ8NHP1 331 aa10.12□□□□□ -0.79
TRAFD1-209ENST00000552896 C11orf40Q8WZ69 217 aa10.12□□□□□ -0.79
TRAFD1-209ENST00000552896 ZDHHC16Q969W1 377 aa10.12□□□□□ -0.79
TRAFD1-209ENST00000552896 TEX12Q9BXU0 123 aa10.12□□□□□ -0.79
TRAFD1-209ENST00000552896 ASH2LQ9UBL3 628 aa10.12□□□□□ -0.79
TRAFD1-209ENST00000552896 KCNG2Q9UJ96 466 aa10.12□□□□□ -0.79
TRAFD1-209ENST00000552896 ITGB1BP2Q9UKP3 347 aa10.12□□□□□ -0.79
TRAFD1-209ENST00000552896 NDRG4Q9ULP0 352 aaKnown RBP10.12□□□□□ -0.79
TRAFD1-209ENST00000552896 OAZ3Q9UMX2 235 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms