RNA–Protein interactions for RNA: ENST00000551261.5

LETMD1-229, Transcript of LETM1 domain containing 1, humanhuman

TSL 5

Gene LETMD1, Length 521 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-229ENST00000551261 ST7LQ8TDW4 575 aa12.57□□□□□ -0.4
LETMD1-229ENST00000551261 CHCHD6Q9BRQ6 235 aa12.57□□□□□ -0.4
LETMD1-229ENST00000551261 NAA50Q9GZZ1 169 aaKnown RBP12.57□□□□□ -0.4
LETMD1-229ENST00000551261 COMMD4Q9H0A8 199 aa12.57□□□□□ -0.4
LETMD1-229ENST00000551261 ACOXLQ9NUZ1 547 aa12.57□□□□□ -0.4
LETMD1-229ENST00000551261 MALT1Q9UDY8 824 aa12.57□□□□□ -0.4
LETMD1-229ENST00000551261 MRM2Q9UI43 246 aaKnown RBP12.57□□□□□ -0.4
LETMD1-229ENST00000551261 ATPIF1Q9UII2 106 aa12.57□□□□□ -0.4
LETMD1-229ENST00000551261 ST6GALNAC2Q9UJ37 374 aa12.57□□□□□ -0.4
LETMD1-229ENST00000551261 SF3B6Q9Y3B4 125 aaKnown RBP12.57□□□□□ -0.4
LETMD1-229ENST00000551261 SPTBN4Q9H254 2564 aa12.56□□□□□ -0.4
LETMD1-229ENST00000551261 TRBV2A0A0J9YWF9 115 aa12.56□□□□□ -0.4
LETMD1-229ENST00000551261 LOC100506127A0A0U1RQW1 187 aa12.56□□□□□ -0.4
LETMD1-229ENST00000551261 A0A1B0GTH9 108 aa12.56□□□□□ -0.4
LETMD1-229ENST00000551261 ATE1O95260 518 aa12.56□□□□□ -0.4
LETMD1-229ENST00000551261 LALBAP00709 142 aa12.56□□□□□ -0.4
LETMD1-229ENST00000551261 CST2P09228 141 aa12.56□□□□□ -0.4
LETMD1-229ENST00000551261 EDNRAP25101 427 aa12.56□□□□□ -0.4
LETMD1-229ENST00000551261 MAPK3P27361 379 aaPredicted RBP12.56□□□□□ -0.4
LETMD1-229ENST00000551261 CD79BP40259 229 aa12.56□□□□□ -0.4
LETMD1-229ENST00000551261 CRYBB2P43320 205 aa12.56□□□□□ -0.4
LETMD1-229ENST00000551261 GDI2P50395 445 aaKnown RBP12.56□□□□□ -0.4
LETMD1-229ENST00000551261 GRB2P62993 217 aaKnown RBP12.56□□□□□ -0.4
LETMD1-229ENST00000551261 SCRN3Q0VDG4 424 aa12.56□□□□□ -0.4
LETMD1-229ENST00000551261 MEP1BQ16820 701 aa12.56□□□□□ -0.4
LETMD1-229ENST00000551261 DGUOKQ16854 277 aa12.56□□□□□ -0.4
LETMD1-229ENST00000551261 ACSF3Q4G176 576 aaPredicted RBP12.56□□□□□ -0.4
LETMD1-229ENST00000551261 YIF1BQ5BJH7 314 aa12.56□□□□□ -0.4
LETMD1-229ENST00000551261 LIPNQ5VXI9 398 aa12.56□□□□□ -0.4
LETMD1-229ENST00000551261 NSUN5P2Q63ZY6 315 aa12.56□□□□□ -0.4
LETMD1-229ENST00000551261 ZNF324BQ6AW86 544 aaPredicted RBP12.56□□□□□ -0.4
LETMD1-229ENST00000551261 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.56□□□□□ -0.4
LETMD1-229ENST00000551261 WDFY1Q8IWB7 410 aa12.56□□□□□ -0.4
LETMD1-229ENST00000551261 RFLNBQ8N5W9 214 aa12.56□□□□□ -0.4
LETMD1-229ENST00000551261 KCTD7Q96MP8 289 aa12.56□□□□□ -0.4
LETMD1-229ENST00000551261 TSC22D3Q99576 134 aa12.56□□□□□ -0.4
LETMD1-229ENST00000551261 FOXB1Q99853 325 aa12.56□□□□□ -0.4
LETMD1-229ENST00000551261 MED18Q9BUE0 208 aa12.56□□□□□ -0.4
LETMD1-229ENST00000551261 RBM24Q9BX46 236 aaKnown RBP12.56□□□□□ -0.4
LETMD1-229ENST00000551261 CRLF2Q9HC73 371 aa12.56□□□□□ -0.4
LETMD1-229ENST00000551261 EXOSC4Q9NPD3 245 aaKnown RBP12.56□□□□□ -0.4
LETMD1-229ENST00000551261 TMEM38BQ9NVV0 291 aa12.56□□□□□ -0.4
LETMD1-229ENST00000551261 CCDC59Q9P031 241 aaKnown RBP12.56□□□□□ -0.4
LETMD1-229ENST00000551261 KLHDC2Q9Y2U9 406 aa12.56□□□□□ -0.4
LETMD1-229ENST00000551261 A3GALT2U3KPV4 340 aa12.56□□□□□ -0.4
LETMD1-229ENST00000551261 URB1O60287 2271 aaKnown RBP12.55□□□□□ -0.4
LETMD1-229ENST00000551261 ACOD1A6NK06 481 aa12.55□□□□□ -0.4
LETMD1-229ENST00000551261 C1QTNF9BB2RNN3 333 aa12.55□□□□□ -0.4
LETMD1-229ENST00000551261 UPK3AO75631 287 aa12.55□□□□□ -0.4
LETMD1-229ENST00000551261 ARL6IP5O75915 188 aa12.55□□□□□ -0.4
LETMD1-229ENST00000551261 IL1AP01583 271 aa12.55□□□□□ -0.4
LETMD1-229ENST00000551261 H2BFMP0C1H6 154 aa12.55□□□□□ -0.4
LETMD1-229ENST00000551261 C1QTNF9P0C862 333 aa12.55□□□□□ -0.4
LETMD1-229ENST00000551261 OR8G3PP0DMU2 310 aa12.55□□□□□ -0.4
LETMD1-229ENST00000551261 SOX6P35712 828 aa12.55□□□□□ -0.4
LETMD1-229ENST00000551261 OPRL1P41146 370 aa12.55□□□□□ -0.4
LETMD1-229ENST00000551261 MMP16P51512 607 aa12.55□□□□□ -0.4
LETMD1-229ENST00000551261 ECH1Q13011 328 aa12.55□□□□□ -0.4
LETMD1-229ENST00000551261 ARL9Q6T311 187 aa12.55□□□□□ -0.4
LETMD1-229ENST00000551261 KLHL24Q6TFL4 600 aa12.55□□□□□ -0.4
LETMD1-229ENST00000551261 FAM214BQ7L5A3 538 aa12.55□□□□□ -0.4
LETMD1-229ENST00000551261 TUSC5Q8IXB3 177 aa12.55□□□□□ -0.4
LETMD1-229ENST00000551261 ZNF100Q8IYN0 542 aa12.55□□□□□ -0.4
LETMD1-229ENST00000551261 KDF1Q8NAX2 398 aaPredicted RBP12.55□□□□□ -0.4
LETMD1-229ENST00000551261 OR6K3Q8NGY3 331 aa12.55□□□□□ -0.4
LETMD1-229ENST00000551261 NABP1Q96AH0 204 aa12.55□□□□□ -0.4
LETMD1-229ENST00000551261 SLAMF6Q96DU3 332 aa12.55□□□□□ -0.4
LETMD1-229ENST00000551261 PGLYRP3Q96LB9 341 aa12.55□□□□□ -0.4
LETMD1-229ENST00000551261 ALKBH3Q96Q83 286 aaPredicted RBP12.55□□□□□ -0.4
LETMD1-229ENST00000551261 TRIB1Q96RU8 372 aa12.55□□□□□ -0.4
LETMD1-229ENST00000551261 HDHD2Q9H0R4 259 aa12.55□□□□□ -0.4
LETMD1-229ENST00000551261 OR51E2Q9H255 320 aa12.55□□□□□ -0.4
LETMD1-229ENST00000551261 DCSTAMPQ9H295 470 aa12.55□□□□□ -0.4
LETMD1-229ENST00000551261 GPR35Q9HC97 309 aa12.55□□□□□ -0.4
LETMD1-229ENST00000551261 DDX28Q9NUL7 540 aaKnown RBP12.55□□□□□ -0.4
LETMD1-229ENST00000551261 UPB1Q9UBR1 384 aa12.55□□□□□ -0.4
LETMD1-229ENST00000551261 GDF2Q9UK05 429 aaPredicted RBP12.55□□□□□ -0.4
LETMD1-229ENST00000551261 LHFPL6Q9Y693 200 aa12.55□□□□□ -0.4
LETMD1-229ENST00000551261 A0A1W2PPW3 197 aa12.54□□□□□ -0.4
LETMD1-229ENST00000551261 MBD3L4A6NDZ8 208 aaPredicted RBP12.54□□□□□ -0.4
LETMD1-229ENST00000551261 MBD3L3A6NE82 208 aaPredicted RBP12.54□□□□□ -0.4
LETMD1-229ENST00000551261 MBD3L5A6NJ08 208 aaPredicted RBP12.54□□□□□ -0.4
LETMD1-229ENST00000551261 TMEM127O75204 238 aa12.54□□□□□ -0.4
LETMD1-229ENST00000551261 CFL1P23528 166 aaKnown RBP12.54□□□□□ -0.4
LETMD1-229ENST00000551261 OR3A2P47893 321 aa12.54□□□□□ -0.4
LETMD1-229ENST00000551261 HCCSP53701 268 aa12.54□□□□□ -0.4
LETMD1-229ENST00000551261 VBP1P61758 197 aa12.54□□□□□ -0.4
LETMD1-229ENST00000551261 NCS1P62166 190 aa12.54□□□□□ -0.4
LETMD1-229ENST00000551261 RPS25P62851 125 aaKnown RBP12.54□□□□□ -0.4
LETMD1-229ENST00000551261 HIST1H3AP68431 136 aa12.54□□□□□ -0.4
LETMD1-229ENST00000551261 ROR2Q01974 943 aaKnown RBP12.54□□□□□ -0.4
LETMD1-229ENST00000551261 ALKBH1Q13686 389 aaKnown RBP12.54□□□□□ -0.4
LETMD1-229ENST00000551261 DOC2BQ14184 412 aa12.54□□□□□ -0.4
LETMD1-229ENST00000551261 GUSBP1Q15486 140 aa12.54□□□□□ -0.4
LETMD1-229ENST00000551261 C3AR1Q16581 482 aa12.54□□□□□ -0.4
LETMD1-229ENST00000551261 HIST2H3PS2Q5TEC6 136 aa12.54□□□□□ -0.4
LETMD1-229ENST00000551261 HIST2H3AQ71DI3 136 aa12.54□□□□□ -0.4
LETMD1-229ENST00000551261 TEX19Q8NA77 164 aa12.54□□□□□ -0.4
LETMD1-229ENST00000551261 MBD3L2Q8NHZ7 208 aaPredicted RBP12.54□□□□□ -0.4
LETMD1-229ENST00000551261 DYNC2LI1Q8TCX1 351 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms