RNA–Protein interactions for RNA: ENST00000550220.1

VTI1BP3-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 3, humanhuman

BASIC

Gene VTI1BP3, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP3-201ENST00000550220 NMNAT1Q9HAN9 279 aaPredicted RBP9.29□□□□□ -0.92
VTI1BP3-201ENST00000550220 MAN2C1Q9NTJ4 1040 aa9.29□□□□□ -0.92
VTI1BP3-201ENST00000550220 RHCGQ9UBD6 479 aa9.29□□□□□ -0.92
VTI1BP3-201ENST00000550220 METRNQ9UJH8 293 aa9.29□□□□□ -0.92
VTI1BP3-201ENST00000550220 YLPM1P49750 1951 aaKnown RBP9.29□□□□□ -0.92
VTI1BP3-201ENST00000550220 LOC100509620A0A075B734 347 aa9.28□□□□□ -0.92
VTI1BP3-201ENST00000550220 TRAV27A0A087WT01 109 aa9.28□□□□□ -0.92
VTI1BP3-201ENST00000550220 A0A087WUU8 490 aa9.28□□□□□ -0.92
VTI1BP3-201ENST00000550220 TRAV20A0A0B4J274 112 aa9.28□□□□□ -0.92
VTI1BP3-201ENST00000550220 A0A1W2PPL8 197 aa9.28□□□□□ -0.92
VTI1BP3-201ENST00000550220 CLDN25C9JDP6 229 aa9.28□□□□□ -0.92
VTI1BP3-201ENST00000550220 NME4O00746 187 aa9.28□□□□□ -0.92
VTI1BP3-201ENST00000550220 ATP8B1O43520 1251 aa9.28□□□□□ -0.92
VTI1BP3-201ENST00000550220 PIP5K1CO60331 668 aa9.28□□□□□ -0.92
VTI1BP3-201ENST00000550220 SERPINA1P01009 418 aa9.28□□□□□ -0.92
VTI1BP3-201ENST00000550220 H1F0P07305 194 aaKnown RBP9.28□□□□□ -0.92
VTI1BP3-201ENST00000550220 ADH4P08319 380 aa9.28□□□□□ -0.92
VTI1BP3-201ENST00000550220 GAAP10253 952 aa9.28□□□□□ -0.92
VTI1BP3-201ENST00000550220 ITGA2P17301 1181 aa9.28□□□□□ -0.92
VTI1BP3-201ENST00000550220 RHCEP18577 417 aa9.28□□□□□ -0.92
VTI1BP3-201ENST00000550220 GSTM3P21266 225 aa9.28□□□□□ -0.92
VTI1BP3-201ENST00000550220 PRDX6P30041 224 aa9.28□□□□□ -0.92
VTI1BP3-201ENST00000550220 MAGEB1P43366 347 aa9.28□□□□□ -0.92
VTI1BP3-201ENST00000550220 GSK3BP49841 420 aa9.28□□□□□ -0.92
VTI1BP3-201ENST00000550220 SMIM11AP58511 58 aa9.28□□□□□ -0.92
VTI1BP3-201ENST00000550220 ERVK-25P63136 954 aa9.28□□□□□ -0.92
VTI1BP3-201ENST00000550220 FMODQ06828 376 aa9.28□□□□□ -0.92
VTI1BP3-201ENST00000550220 ALKBH6Q3KRA9 238 aa9.28□□□□□ -0.92
VTI1BP3-201ENST00000550220 ACSM5Q6NUN0 579 aa9.28□□□□□ -0.92
VTI1BP3-201ENST00000550220 C8orf82Q6P1X6 216 aaPredicted RBP9.28□□□□□ -0.92
VTI1BP3-201ENST00000550220 IL17RELQ6ZVW7 336 aa9.28□□□□□ -0.92
VTI1BP3-201ENST00000550220 PEG10Q86TG7 708 aaKnown RBP9.28□□□□□ -0.92
VTI1BP3-201ENST00000550220 TREML1Q86YW5 311 aa9.28□□□□□ -0.92
VTI1BP3-201ENST00000550220 NPEPL1Q8NDH3 523 aa9.28□□□□□ -0.92
VTI1BP3-201ENST00000550220 AKR7LQ8NHP1 331 aa9.28□□□□□ -0.92
VTI1BP3-201ENST00000550220 KLF14Q8TD94 323 aaPredicted RBP9.28□□□□□ -0.92
VTI1BP3-201ENST00000550220 IPCEF1Q8WWN9 437 aaPredicted RBP9.28□□□□□ -0.92
VTI1BP3-201ENST00000550220 C4orf45Q96LM5 186 aa9.28□□□□□ -0.92
VTI1BP3-201ENST00000550220 TSPAN32Q96QS1 320 aa9.28□□□□□ -0.92
VTI1BP3-201ENST00000550220 SPAG4Q9NPE6 437 aa9.28□□□□□ -0.92
VTI1BP3-201ENST00000550220 POLE4Q9NR33 117 aa9.28□□□□□ -0.92
VTI1BP3-201ENST00000550220 TBCCD1Q9NVR7 557 aa9.28□□□□□ -0.92
VTI1BP3-201ENST00000550220 ZNF446Q9NWS9 450 aa9.28□□□□□ -0.92
VTI1BP3-201ENST00000550220 HIF1ANQ9NWT6 349 aa9.28□□□□□ -0.92
VTI1BP3-201ENST00000550220 SAMD4AQ9UPU9 718 aaKnown RBP9.28□□□□□ -0.92
VTI1BP3-201ENST00000550220 SNX13Q9Y5W8 968 aa9.28□□□□□ -0.92
VTI1BP3-201ENST00000550220 ENPP4Q9Y6X5 453 aa9.28□□□□□ -0.92
VTI1BP3-201ENST00000550220 IGKV1D-43A0A0B4J1Z2 117 aa9.27□□□□□ -0.93
VTI1BP3-201ENST00000550220 PRSS37A4D1T9 235 aa9.27□□□□□ -0.93
VTI1BP3-201ENST00000550220 J3KTA2 159 aa9.27□□□□□ -0.93
VTI1BP3-201ENST00000550220 J3QW42 95 aa9.27□□□□□ -0.93
VTI1BP3-201ENST00000550220 CDC14BO60729 498 aa9.27□□□□□ -0.93
VTI1BP3-201ENST00000550220 NCR1O76036 304 aa9.27□□□□□ -0.93
VTI1BP3-201ENST00000550220 PRSS23O95084 383 aa9.27□□□□□ -0.93
VTI1BP3-201ENST00000550220 NDUFB2O95178 105 aa9.27□□□□□ -0.93
VTI1BP3-201ENST00000550220 TNFSF4P23510 183 aa9.27□□□□□ -0.93
VTI1BP3-201ENST00000550220 GATA3P23771 443 aa9.27□□□□□ -0.93
VTI1BP3-201ENST00000550220 WNT5AP41221 380 aa9.27□□□□□ -0.93
VTI1BP3-201ENST00000550220 NUDT2P50583 147 aa9.27□□□□□ -0.93
VTI1BP3-201ENST00000550220 MMP15P51511 669 aa9.27□□□□□ -0.93
VTI1BP3-201ENST00000550220 PSME3P61289 254 aa9.27□□□□□ -0.93
VTI1BP3-201ENST00000550220 ERVS71-1P61550 626 aa9.27□□□□□ -0.93
VTI1BP3-201ENST00000550220 LMO4P61968 165 aa9.27□□□□□ -0.93
VTI1BP3-201ENST00000550220 PPP1CBP62140 327 aa9.27□□□□□ -0.93
VTI1BP3-201ENST00000550220 LSM6P62312 80 aaKnown RBP9.27□□□□□ -0.93
VTI1BP3-201ENST00000550220 KRT72Q14CN4 511 aa9.27□□□□□ -0.93
VTI1BP3-201ENST00000550220 KRTAP24-1Q3LI83 254 aa9.27□□□□□ -0.93
VTI1BP3-201ENST00000550220 GLYATQ6IB77 296 aa9.27□□□□□ -0.93
VTI1BP3-201ENST00000550220 SHQ1Q6PI26 577 aaKnown RBP9.27□□□□□ -0.93
VTI1BP3-201ENST00000550220 USP51Q70EK9 711 aa9.27□□□□□ -0.93
VTI1BP3-201ENST00000550220 ZNF101Q8IZC7 436 aa9.27□□□□□ -0.93
VTI1BP3-201ENST00000550220 OR13C2Q8NGS9 318 aa9.27□□□□□ -0.93
VTI1BP3-201ENST00000550220 ABHD4Q8TB40 342 aa9.27□□□□□ -0.93
VTI1BP3-201ENST00000550220 SLC25A40Q8TBP6 338 aa9.27□□□□□ -0.93
VTI1BP3-201ENST00000550220 C19orf24Q9BVV8 132 aa9.27□□□□□ -0.93
VTI1BP3-201ENST00000550220 OR2J1Q9GZK6 312 aa9.27□□□□□ -0.93
VTI1BP3-201ENST00000550220 WNT5BQ9H1J7 359 aa9.27□□□□□ -0.93
VTI1BP3-201ENST00000550220 TREM2Q9NZC2 230 aa9.27□□□□□ -0.93
VTI1BP3-201ENST00000550220 ABCD2Q9UBJ2 740 aa9.27□□□□□ -0.93
VTI1BP3-201ENST00000550220 SVEP1Q4LDE5 3571 aa9.27□□□□□ -0.93
VTI1BP3-201ENST00000550220 TEX13CA0A0J9YWL9 993 aa9.26□□□□□ -0.93
VTI1BP3-201ENST00000550220 J3QLI3 93 aa9.26□□□□□ -0.93
VTI1BP3-201ENST00000550220 SGCEO43556 437 aa9.26□□□□□ -0.93
VTI1BP3-201ENST00000550220 SPRY3O43610 288 aa9.26□□□□□ -0.93
VTI1BP3-201ENST00000550220 PTP4A3O75365 173 aa9.26□□□□□ -0.93
VTI1BP3-201ENST00000550220 KHDRBS3O75525 346 aaKnown RBP9.26□□□□□ -0.93
VTI1BP3-201ENST00000550220 ABHD16AO95870 558 aa9.26□□□□□ -0.93
VTI1BP3-201ENST00000550220 IGHV1-46P01743 117 aa9.26□□□□□ -0.93
VTI1BP3-201ENST00000550220 CD55P08174 381 aa9.26□□□□□ -0.93
VTI1BP3-201ENST00000550220 TNFRSF1AP19438 455 aa9.26□□□□□ -0.93
VTI1BP3-201ENST00000550220 SDHAP31040 664 aa9.26□□□□□ -0.93
VTI1BP3-201ENST00000550220 RPS6KA3P51812 740 aa9.26□□□□□ -0.93
VTI1BP3-201ENST00000550220 AQP6Q13520 282 aa9.26□□□□□ -0.93
VTI1BP3-201ENST00000550220 FHL1Q13642 323 aa9.26□□□□□ -0.93
VTI1BP3-201ENST00000550220 ENDOGQ14249 297 aaKnown RBP9.26□□□□□ -0.93
VTI1BP3-201ENST00000550220 TSTQ16762 297 aaKnown RBP9.26□□□□□ -0.93
VTI1BP3-201ENST00000550220 MTX3Q5HYI7 312 aa9.26□□□□□ -0.93
VTI1BP3-201ENST00000550220 ZNF774Q6NX45 483 aa9.26□□□□□ -0.93
VTI1BP3-201ENST00000550220 FAHD2BQ6P2I3 314 aaPredicted RBP9.26□□□□□ -0.93
VTI1BP3-201ENST00000550220 PGM2L1Q6PCE3 622 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms