RNA–Protein interactions for RNA: ENST00000549896.1

AC013417.1-201, humanhuman

TSL 5 BASIC

Gene AC013417.1, Length 271 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC013417.1-201ENST00000549896 CDH17Q12864 832 aa1.3□□□□□ -2.2
AC013417.1-201ENST00000549896 MRPL28Q13084 256 aaKnown RBP1.3□□□□□ -2.2
AC013417.1-201ENST00000549896 MAD2L1BPQ15013 274 aaPredicted RBP1.3□□□□□ -2.2
AC013417.1-201ENST00000549896 SLC36A3Q495N2 470 aa1.3□□□□□ -2.2
AC013417.1-201ENST00000549896 PTPN20Q4JDL3 420 aa1.3□□□□□ -2.2
AC013417.1-201ENST00000549896 SPNS3Q6ZMD2 512 aa1.3□□□□□ -2.2
AC013417.1-201ENST00000549896 METTL13Q8N6R0 699 aa1.3□□□□□ -2.2
AC013417.1-201ENST00000549896 SLC35G3Q8N808 338 aa1.3□□□□□ -2.2
AC013417.1-201ENST00000549896 TTLQ8NG68 377 aa1.3□□□□□ -2.2
AC013417.1-201ENST00000549896 CMTM2Q8TAZ6 248 aa1.3□□□□□ -2.2
AC013417.1-201ENST00000549896 TMEM159Q96B96 161 aa1.3□□□□□ -2.2
AC013417.1-201ENST00000549896 SLC38A2Q96QD8 506 aa1.3□□□□□ -2.2
AC013417.1-201ENST00000549896 PKMYT1Q99640 499 aa1.3□□□□□ -2.2
AC013417.1-201ENST00000549896 HSD17B10Q99714 261 aaKnown RBP1.3□□□□□ -2.2
AC013417.1-201ENST00000549896 PARD6BQ9BYG5 372 aa1.3□□□□□ -2.2
AC013417.1-201ENST00000549896 SDAD1Q9NVU7 687 aaKnown RBP eCLIP1.3□□□□□ -2.2
AC013417.1-201ENST00000549896 SCN4AP35499 1836 aa1.29□□□□□ -2.2
AC013417.1-201ENST00000549896 REM1O75628 298 aa1.29□□□□□ -2.2
AC013417.1-201ENST00000549896 ATP6V1C1P21283 382 aa1.29□□□□□ -2.2
AC013417.1-201ENST00000549896 F2RP25116 425 aa1.29□□□□□ -2.2
AC013417.1-201ENST00000549896 CD1CP29017 333 aa1.29□□□□□ -2.2
AC013417.1-201ENST00000549896 MPV17P39210 176 aa1.29□□□□□ -2.2
AC013417.1-201ENST00000549896 VHLP40337 213 aa1.29□□□□□ -2.2
AC013417.1-201ENST00000549896 FBXW4P57775 412 aa1.29□□□□□ -2.2
AC013417.1-201ENST00000549896 USH1GQ495M9 461 aa1.29□□□□□ -2.2
AC013417.1-201ENST00000549896 ADNP2Q6IQ32 1131 aa1.29□□□□□ -2.2
AC013417.1-201ENST00000549896 ENPP6Q6UWR7 440 aa1.29□□□□□ -2.2
AC013417.1-201ENST00000549896 ZNF619Q8N2I2 560 aa1.29□□□□□ -2.2
AC013417.1-201ENST00000549896 OR10R2Q8NGX6 335 aa1.29□□□□□ -2.2
AC013417.1-201ENST00000549896 OR10J6PQ8NGY7 276 aa1.29□□□□□ -2.2
AC013417.1-201ENST00000549896 GALNT14Q96FL9 552 aa1.29□□□□□ -2.2
AC013417.1-201ENST00000549896 PPA2Q9H2U2 334 aa1.29□□□□□ -2.2
AC013417.1-201ENST00000549896 ZSCAN16Q9H4T2 348 aaPredicted RBP1.29□□□□□ -2.2
AC013417.1-201ENST00000549896 C21orf62Q9NYP8 219 aa1.29□□□□□ -2.2
AC013417.1-201ENST00000549896 TAS2R1Q9NYW7 299 aa1.29□□□□□ -2.2
AC013417.1-201ENST00000549896 TRMT112Q9UI30 125 aaKnown RBP1.29□□□□□ -2.2
AC013417.1-201ENST00000549896 TRAV19A0A0A6YYK7 116 aa1.28□□□□□ -2.2
AC013417.1-201ENST00000549896 IGHV7-4-1A0A0J9YVY3 117 aa1.28□□□□□ -2.2
AC013417.1-201ENST00000549896 METTL21EPA6NDL7 271 aa1.28□□□□□ -2.2
AC013417.1-201ENST00000549896 H6PDO95479 791 aa1.28□□□□□ -2.2
AC013417.1-201ENST00000549896 CCNA1P78396 465 aa1.28□□□□□ -2.2
AC013417.1-201ENST00000549896 TWF1Q12792 350 aa1.28□□□□□ -2.2
AC013417.1-201ENST00000549896 RNASE13Q5GAN3 156 aaKnown RBP1.28□□□□□ -2.2
AC013417.1-201ENST00000549896 OR4F3Q6IEY1 312 aa1.28□□□□□ -2.2
AC013417.1-201ENST00000549896 LRRC74BQ6ZQY2 392 aa1.28□□□□□ -2.2
AC013417.1-201ENST00000549896 WDR34Q96EX3 536 aa1.28□□□□□ -2.2
AC013417.1-201ENST00000549896 SLC38A10Q9HBR0 1119 aa1.28□□□□□ -2.2
AC013417.1-201ENST00000549896 RAB18Q9NP72 206 aa1.28□□□□□ -2.2
AC013417.1-201ENST00000549896 POLE3Q9NRF9 147 aa1.28□□□□□ -2.2
AC013417.1-201ENST00000549896 SMOXQ9NWM0 555 aa1.28□□□□□ -2.2
AC013417.1-201ENST00000549896 ACTR3BQ9P1U1 418 aa1.28□□□□□ -2.2
AC013417.1-201ENST00000549896 COL5A3P25940 1745 aaPredicted RBP1.27□□□□□ -2.21
AC013417.1-201ENST00000549896 IGHV1-3A0A0C4DH29 117 aa1.27□□□□□ -2.21
AC013417.1-201ENST00000549896 DIRAS3O95661 229 aa1.27□□□□□ -2.21
AC013417.1-201ENST00000549896 MDH1P40925 334 aaKnown RBP1.27□□□□□ -2.21
AC013417.1-201ENST00000549896 SYKP43405 635 aa1.27□□□□□ -2.21
AC013417.1-201ENST00000549896 ATP1B3P54709 279 aa1.27□□□□□ -2.21
AC013417.1-201ENST00000549896 VSX2P58304 361 aaPredicted RBP1.27□□□□□ -2.21
AC013417.1-201ENST00000549896 BIKQ13323 160 aa1.27□□□□□ -2.21
AC013417.1-201ENST00000549896 PDK4Q16654 411 aa1.27□□□□□ -2.21
AC013417.1-201ENST00000549896 GUSBP11Q6P575 273 aa1.27□□□□□ -2.21
AC013417.1-201ENST00000549896 TICAM2Q86XR7 235 aa1.27□□□□□ -2.21
AC013417.1-201ENST00000549896 HGDQ93099 445 aa1.27□□□□□ -2.21
AC013417.1-201ENST00000549896 ZBED3Q96IU2 234 aaPredicted RBP1.27□□□□□ -2.21
AC013417.1-201ENST00000549896 TPPP3Q9BW30 176 aa1.27□□□□□ -2.21
AC013417.1-201ENST00000549896 TSSC4Q9Y5U2 329 aaPredicted RBP1.27□□□□□ -2.21
AC013417.1-201ENST00000549896 SVILO95425 2214 aa1.26□□□□□ -2.21
AC013417.1-201ENST00000549896 MAPK8IP3Q9UPT6 1336 aa1.26□□□□□ -2.21
AC013417.1-201ENST00000549896 C4orf51C9J302 202 aa1.26□□□□□ -2.21
AC013417.1-201ENST00000549896 ARPC3O15145 178 aa1.26□□□□□ -2.21
AC013417.1-201ENST00000549896 CHMP2AO43633 222 aa1.26□□□□□ -2.21
AC013417.1-201ENST00000549896 SLC22A5O76082 557 aa1.26□□□□□ -2.21
AC013417.1-201ENST00000549896 LHBP01229 141 aa1.26□□□□□ -2.21
AC013417.1-201ENST00000549896 PFN1P07737 140 aaKnown RBP1.26□□□□□ -2.21
AC013417.1-201ENST00000549896 TCP1P17987 556 aaKnown RBP1.26□□□□□ -2.21
AC013417.1-201ENST00000549896 GRIA1P42261 906 aa1.26□□□□□ -2.21
AC013417.1-201ENST00000549896 CCDC184Q52MB2 194 aa1.26□□□□□ -2.21
AC013417.1-201ENST00000549896 YIF1BQ5BJH7 314 aa1.26□□□□□ -2.21
AC013417.1-201ENST00000549896 TCEAL5Q5H9L2 206 aa1.26□□□□□ -2.21
AC013417.1-201ENST00000549896 H3F3CQ6NXT2 135 aa1.26□□□□□ -2.21
AC013417.1-201ENST00000549896 SGPP2Q8IWX5 399 aa1.26□□□□□ -2.21
AC013417.1-201ENST00000549896 FAM83FQ8NEG4 500 aaPredicted RBP1.26□□□□□ -2.21
AC013417.1-201ENST00000549896 TCEAL3Q969E4 200 aa1.26□□□□□ -2.21
AC013417.1-201ENST00000549896 IFT74Q96LB3 600 aa1.26□□□□□ -2.21
AC013417.1-201ENST00000549896 COPS8Q99627 209 aa1.26□□□□□ -2.21
AC013417.1-201ENST00000549896 THUMPD2Q9BTF0 503 aaKnown RBP1.26□□□□□ -2.21
AC013417.1-201ENST00000549896 FGF23Q9GZV9 251 aaPredicted RBP1.26□□□□□ -2.21
AC013417.1-201ENST00000549896 C8orf17Q9NRJ1 99 aa1.26□□□□□ -2.21
AC013417.1-201ENST00000549896 EIF1BO60739 113 aaKnown RBP1.25□□□□□ -2.21
AC013417.1-201ENST00000549896 SURF6O75683 361 aaKnown RBP1.25□□□□□ -2.21
AC013417.1-201ENST00000549896 HRES1P13985 223 aa1.25□□□□□ -2.21
AC013417.1-201ENST00000549896 NCF1P14598 390 aaPredicted RBP1.25□□□□□ -2.21
AC013417.1-201ENST00000549896 RAB3AP20336 220 aa1.25□□□□□ -2.21
AC013417.1-201ENST00000549896 EIF1P41567 113 aaKnown RBP1.25□□□□□ -2.21
AC013417.1-201ENST00000549896 GALR1P47211 349 aa1.25□□□□□ -2.21
AC013417.1-201ENST00000549896 PRLHRP49683 370 aa1.25□□□□□ -2.21
AC013417.1-201ENST00000549896 IRX3P78415 501 aaPredicted RBP1.25□□□□□ -2.21
AC013417.1-201ENST00000549896 CDK5Q00535 292 aa1.25□□□□□ -2.21
AC013417.1-201ENST00000549896 TEX30Q5JUR7 227 aa1.25□□□□□ -2.21
AC013417.1-201ENST00000549896 RIPPLY2Q5TAB7 128 aa1.25□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms