RNA–Protein interactions for RNA: ENST00000546816.5

CCDC38-204, Transcript of coiled-coil domain containing 38, humanhuman

TSL 2

Gene CCDC38, Length 465 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-204ENST00000546816 AIF1P55008 147 aa1.66□□□□□ -2.14
CCDC38-204ENST00000546816 GPX6P59796 221 aa1.66□□□□□ -2.14
CCDC38-204ENST00000546816 ACTR1AP61163 376 aa1.66□□□□□ -2.14
CCDC38-204ENST00000546816 NUTF2P61970 127 aaKnown RBP1.66□□□□□ -2.14
CCDC38-204ENST00000546816 ZNF616Q08AN1 781 aa1.66□□□□□ -2.14
CCDC38-204ENST00000546816 PPIL2Q13356 520 aa1.66□□□□□ -2.14
CCDC38-204ENST00000546816 SLC39A6Q13433 755 aa1.66□□□□□ -2.14
CCDC38-204ENST00000546816 SMUG1Q53HV7 270 aa1.66□□□□□ -2.14
CCDC38-204ENST00000546816 OR2A2Q6IF42 318 aa1.66□□□□□ -2.14
CCDC38-204ENST00000546816 PRMT9Q6P2P2 845 aa1.66□□□□□ -2.14
CCDC38-204ENST00000546816 CEMP1Q6PRD7 247 aaPredicted RBP1.66□□□□□ -2.14
CCDC38-204ENST00000546816 CASC1Q6TDU7 716 aa1.66□□□□□ -2.14
CCDC38-204ENST00000546816 RUFY3Q7L099 469 aa1.66□□□□□ -2.14
CCDC38-204ENST00000546816 PDIK1LQ8N165 341 aa1.66□□□□□ -2.14
CCDC38-204ENST00000546816 OR1L4Q8NGR5 311 aa1.66□□□□□ -2.14
CCDC38-204ENST00000546816 MRGPRFQ96AM1 343 aa1.66□□□□□ -2.14
CCDC38-204ENST00000546816 RBMXL1Q96E39 390 aaKnown RBP1.66□□□□□ -2.14
CCDC38-204ENST00000546816 CNDP1Q96KN2 507 aa1.66□□□□□ -2.14
CCDC38-204ENST00000546816 NPY6RQ99463 290 aa1.66□□□□□ -2.14
CCDC38-204ENST00000546816 C1orf198Q9H425 327 aa1.66□□□□□ -2.14
CCDC38-204ENST00000546816 TMCC3Q9ULS5 477 aa1.66□□□□□ -2.14
CCDC38-204ENST00000546816 CLEC4AQ9UMR7 237 aa1.66□□□□□ -2.14
CCDC38-204ENST00000546816 HYOU1Q9Y4L1 999 aa1.66□□□□□ -2.14
CCDC38-204ENST00000546816 NLRC5Q86WI3 1866 aa1.65□□□□□ -2.14
CCDC38-204ENST00000546816 SURF6O75683 361 aaKnown RBP1.65□□□□□ -2.15
CCDC38-204ENST00000546816 IL1BP01584 269 aa1.65□□□□□ -2.15
CCDC38-204ENST00000546816 CT62P0C5K7 136 aa1.65□□□□□ -2.15
CCDC38-204ENST00000546816 ATP1B2P14415 290 aaPredicted RBP1.65□□□□□ -2.15
CCDC38-204ENST00000546816 IL1RNP18510 177 aa1.65□□□□□ -2.15
CCDC38-204ENST00000546816 KCNJ2P63252 427 aa1.65□□□□□ -2.15
CCDC38-204ENST00000546816 MRPS22P82650 360 aaKnown RBP1.65□□□□□ -2.15
CCDC38-204ENST00000546816 TWF1Q12792 350 aa1.65□□□□□ -2.15
CCDC38-204ENST00000546816 SRSF5Q13243 272 aaKnown RBP1.65□□□□□ -2.15
CCDC38-204ENST00000546816 ORMDL2Q53FV1 153 aa1.65□□□□□ -2.15
CCDC38-204ENST00000546816 CENPPQ6IPU0 288 aa1.65□□□□□ -2.15
CCDC38-204ENST00000546816 PMF1Q6P1K2 205 aa1.65□□□□□ -2.15
CCDC38-204ENST00000546816 RGS9BPQ6ZS82 235 aa1.65□□□□□ -2.15
CCDC38-204ENST00000546816 NCCRP1Q6ZVX7 275 aaPredicted RBP1.65□□□□□ -2.15
CCDC38-204ENST00000546816 BHLHE23Q8NDY6 225 aa1.65□□□□□ -2.15
CCDC38-204ENST00000546816 OR8U1Q8NH10 309 aa1.65□□□□□ -2.15
CCDC38-204ENST00000546816 FAM110BQ8TC76 370 aa1.65□□□□□ -2.15
CCDC38-204ENST00000546816 CXorf40AQ8TE69 158 aa1.65□□□□□ -2.15
CCDC38-204ENST00000546816 FMO2Q99518 471 aa1.65□□□□□ -2.15
CCDC38-204ENST00000546816 FRMD8P1Q9BZ68 369 aaPredicted RBP1.65□□□□□ -2.15
CCDC38-204ENST00000546816 LTBP4Q8N2S1 1624 aa1.65□□□□□ -2.15
CCDC38-204ENST00000546816 ATAD2BQ9ULI0 1458 aa1.64□□□□□ -2.15
CCDC38-204ENST00000546816 CENPVL3A0A0U1RRI6 287 aa1.64□□□□□ -2.15
CCDC38-204ENST00000546816 A0A1B0GVL5 298 aa1.64□□□□□ -2.15
CCDC38-204ENST00000546816 GOSR2O14653 212 aa1.64□□□□□ -2.15
CCDC38-204ENST00000546816 EEDO75530 441 aaKnown RBP1.64□□□□□ -2.15
CCDC38-204ENST00000546816 MCF2P10911 925 aa1.64□□□□□ -2.15
CCDC38-204ENST00000546816 KITLGP21583 273 aa1.64□□□□□ -2.15
CCDC38-204ENST00000546816 SSTR5P35346 364 aa1.64□□□□□ -2.15
CCDC38-204ENST00000546816 CDKN1BP46527 198 aa1.64□□□□□ -2.15
CCDC38-204ENST00000546816 SLC11A1P49279 550 aa1.64□□□□□ -2.15
CCDC38-204ENST00000546816 SEC61GP60059 68 aa1.64□□□□□ -2.15
CCDC38-204ENST00000546816 RPL23AP62750 156 aaKnown RBP1.64□□□□□ -2.15
CCDC38-204ENST00000546816 FLI1Q01543 452 aaPredicted RBP1.64□□□□□ -2.15
CCDC38-204ENST00000546816 QPRTQ15274 297 aa1.64□□□□□ -2.15
CCDC38-204ENST00000546816 RGNQ15493 299 aa1.64□□□□□ -2.15
CCDC38-204ENST00000546816 SPIN3Q5JUX0 258 aa1.64□□□□□ -2.15
CCDC38-204ENST00000546816 CTSL3PQ5NE16 218 aa1.64□□□□□ -2.15
CCDC38-204ENST00000546816 AVPI1Q5T686 147 aa1.64□□□□□ -2.15
CCDC38-204ENST00000546816 ZFP1Q6P2D0 407 aa1.64□□□□□ -2.15
CCDC38-204ENST00000546816 UQCC3Q6UW78 93 aa1.64□□□□□ -2.15
CCDC38-204ENST00000546816 FBXW12Q6X9E4 464 aa1.64□□□□□ -2.15
CCDC38-204ENST00000546816 EGFL6Q8IUX8 553 aa1.64□□□□□ -2.15
CCDC38-204ENST00000546816 MIR7-3HGQ8N6C7 128 aa1.64□□□□□ -2.15
CCDC38-204ENST00000546816 EIF1ADQ8N9N8 165 aaKnown RBP1.64□□□□□ -2.15
CCDC38-204ENST00000546816 APCDD1LQ8NCL9 501 aa1.64□□□□□ -2.15
CCDC38-204ENST00000546816 OR4K5Q8NGD3 323 aa1.64□□□□□ -2.15
CCDC38-204ENST00000546816 OR8J1Q8NGP2 316 aa1.64□□□□□ -2.15
CCDC38-204ENST00000546816 GPR151Q8TDV0 419 aa1.64□□□□□ -2.15
CCDC38-204ENST00000546816 SLC25A46Q96AG3 418 aa1.64□□□□□ -2.15
CCDC38-204ENST00000546816 FLYWCH2Q96CP2 140 aaKnown RBP1.64□□□□□ -2.15
CCDC38-204ENST00000546816 NEURL3Q96EH8 262 aa1.64□□□□□ -2.15
CCDC38-204ENST00000546816 TCEANC2Q96MN5 208 aa1.64□□□□□ -2.15
CCDC38-204ENST00000546816 TIMM29Q9BSF4 260 aa1.64□□□□□ -2.15
CCDC38-204ENST00000546816 TEKT3Q9BXF9 490 aa1.64□□□□□ -2.15
CCDC38-204ENST00000546816 LRRC40Q9H9A6 602 aa1.64□□□□□ -2.15
CCDC38-204ENST00000546816 FN3KRPQ9HA64 309 aa1.64□□□□□ -2.15
CCDC38-204ENST00000546816 ENOPH1Q9UHY7 261 aa1.64□□□□□ -2.15
CCDC38-204ENST00000546816 SIGLEC9Q9Y336 463 aa1.64□□□□□ -2.15
CCDC38-204ENST00000546816 SPECC1L-ADORA2AF8WAN1 911 aa1.63□□□□□ -2.15
CCDC38-204ENST00000546816 CDC7O00311 574 aa1.63□□□□□ -2.15
CCDC38-204ENST00000546816 ETS2P15036 469 aa1.63□□□□□ -2.15
CCDC38-204ENST00000546816 CASP14P31944 242 aa1.63□□□□□ -2.15
CCDC38-204ENST00000546816 FOXN2P32314 431 aa1.63□□□□□ -2.15
CCDC38-204ENST00000546816 MAS1LP35410 378 aa1.63□□□□□ -2.15
CCDC38-204ENST00000546816 UBE2NP61088 152 aaKnown RBP1.63□□□□□ -2.15
CCDC38-204ENST00000546816 ECH1Q13011 328 aa1.63□□□□□ -2.15
CCDC38-204ENST00000546816 TAF9Q16594 264 aa1.63□□□□□ -2.15
CCDC38-204ENST00000546816 PHYHD1Q5SRE7 291 aa1.63□□□□□ -2.15
CCDC38-204ENST00000546816 SPECC1LQ69YQ0 1117 aa1.63□□□□□ -2.15
CCDC38-204ENST00000546816 SPINT4Q6UDR6 99 aa1.63□□□□□ -2.15
CCDC38-204ENST00000546816 CDKL3Q8IVW4 592 aaPredicted RBP1.63□□□□□ -2.15
CCDC38-204ENST00000546816 ST20-AS1Q8NBB2 130 aa1.63□□□□□ -2.15
CCDC38-204ENST00000546816 HSD17B11Q8NBQ5 300 aa1.63□□□□□ -2.15
CCDC38-204ENST00000546816 PIFOQ8TCI5 191 aa1.63□□□□□ -2.15
CCDC38-204ENST00000546816 C12orf42Q96LP6 360 aa1.63□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms