RNA–Protein interactions for RNA: ENST00000546386.1

CCDC38-202, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-202ENST00000546386 INPP5EQ9NRR6 644 aa10.63□□□□□ -0.71
CCDC38-202ENST00000546386 CGGBP1Q9UFW8 167 aaPredicted RBP10.63□□□□□ -0.71
CCDC38-202ENST00000546386 PCDHGB2Q9Y5G2 931 aa10.63□□□□□ -0.71
CCDC38-202ENST00000546386 TACC2O95359 2948 aa10.63□□□□□ -0.71
CCDC38-202ENST00000546386 MAP1AP78559 2803 aaPredicted RBP10.63□□□□□ -0.71
CCDC38-202ENST00000546386 IQCMA0A1B0GVH7 501 aa10.63□□□□□ -0.71
CCDC38-202ENST00000546386 TMEM269A0A1B0GVZ9 245 aa10.63□□□□□ -0.71
CCDC38-202ENST00000546386 ZNF726A6NNF4 738 aa10.63□□□□□ -0.71
CCDC38-202ENST00000546386 E9PLN8 166 aa10.63□□□□□ -0.71
CCDC38-202ENST00000546386 EEF1E1O43324 174 aaKnown RBP10.63□□□□□ -0.71
CCDC38-202ENST00000546386 SC5DO75845 299 aa10.63□□□□□ -0.71
CCDC38-202ENST00000546386 DBHP09172 617 aa10.63□□□□□ -0.71
CCDC38-202ENST00000546386 APEHP13798 732 aaKnown RBP10.63□□□□□ -0.71
CCDC38-202ENST00000546386 LCN1P31025 176 aa10.63□□□□□ -0.71
CCDC38-202ENST00000546386 SPOCK1Q08629 439 aa10.63□□□□□ -0.71
CCDC38-202ENST00000546386 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.63□□□□□ -0.71
CCDC38-202ENST00000546386 SLC18B1Q6NT16 456 aa10.63□□□□□ -0.71
CCDC38-202ENST00000546386 GLB1L2Q8IW92 636 aa10.63□□□□□ -0.71
CCDC38-202ENST00000546386 SULF2Q8IWU5 870 aa10.63□□□□□ -0.71
CCDC38-202ENST00000546386 NPRL2Q8WTW4 380 aa10.63□□□□□ -0.71
CCDC38-202ENST00000546386 HPS1Q92902 700 aa10.63□□□□□ -0.71
CCDC38-202ENST00000546386 JAM3Q9BX67 310 aa10.63□□□□□ -0.71
CCDC38-202ENST00000546386 LIN7BQ9HAP6 207 aa10.63□□□□□ -0.71
CCDC38-202ENST00000546386 ISYNA1Q9NPH2 558 aa10.63□□□□□ -0.71
CCDC38-202ENST00000546386 MOKQ9UQ07 419 aa10.63□□□□□ -0.71
CCDC38-202ENST00000546386 B3GALT5Q9Y2C3 310 aa10.63□□□□□ -0.71
CCDC38-202ENST00000546386 FKBP7Q9Y680 259 aa10.63□□□□□ -0.71
CCDC38-202ENST00000546386 A0A075B6Q4 140 aa10.62□□□□□ -0.71
CCDC38-202ENST00000546386 ZNF208O43345 1280 aa10.62□□□□□ -0.71
CCDC38-202ENST00000546386 SERPINA7P05543 415 aa10.62□□□□□ -0.71
CCDC38-202ENST00000546386 EPXP11678 715 aa10.62□□□□□ -0.71
CCDC38-202ENST00000546386 ZNF12P17014 697 aa10.62□□□□□ -0.71
CCDC38-202ENST00000546386 DSCR4P56555 118 aaPredicted RBP10.62□□□□□ -0.71
CCDC38-202ENST00000546386 SLC17A1Q14916 467 aa10.62□□□□□ -0.71
CCDC38-202ENST00000546386 EMC4Q5J8M3 183 aa10.62□□□□□ -0.71
CCDC38-202ENST00000546386 ZNF57Q68EA5 555 aaPredicted RBP10.62□□□□□ -0.71
CCDC38-202ENST00000546386 FAAP20Q6NZ36 180 aa10.62□□□□□ -0.71
CCDC38-202ENST00000546386 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.62□□□□□ -0.71
CCDC38-202ENST00000546386 SYS1Q8N2H4 156 aa10.62□□□□□ -0.71
CCDC38-202ENST00000546386 OR10S1Q8NGN2 331 aa10.62□□□□□ -0.71
CCDC38-202ENST00000546386 RBP7Q96R05 134 aa10.62□□□□□ -0.71
CCDC38-202ENST00000546386 CDC6Q99741 560 aa10.62□□□□□ -0.71
CCDC38-202ENST00000546386 COQ7Q99807 217 aa10.62□□□□□ -0.71
CCDC38-202ENST00000546386 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.62□□□□□ -0.71
CCDC38-202ENST00000546386 C11orf54Q9H0W9 315 aaPredicted RBP10.62□□□□□ -0.71
CCDC38-202ENST00000546386 BEX1Q9HBH7 125 aa10.62□□□□□ -0.71
CCDC38-202ENST00000546386 OR4C45A6NMZ5 311 aa10.62□□□□□ -0.71
CCDC38-202ENST00000546386 NPIPA2E9PIF3 369 aa10.62□□□□□ -0.71
CCDC38-202ENST00000546386 F5H5K5 113 aa10.62□□□□□ -0.71
CCDC38-202ENST00000546386 NPIPA3F8WFD2 350 aa10.62□□□□□ -0.71
CCDC38-202ENST00000546386 SNPHO15079 494 aa10.62□□□□□ -0.71
CCDC38-202ENST00000546386 CBR3O75828 277 aa10.62□□□□□ -0.71
CCDC38-202ENST00000546386 EVX1P49640 407 aa10.62□□□□□ -0.71
CCDC38-202ENST00000546386 DAP3P51398 398 aaKnown RBP10.62□□□□□ -0.71
CCDC38-202ENST00000546386 CARD18P57730 90 aa10.62□□□□□ -0.71
CCDC38-202ENST00000546386 ASPHD2Q6ICH7 369 aa10.62□□□□□ -0.71
CCDC38-202ENST00000546386 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.62□□□□□ -0.71
CCDC38-202ENST00000546386 DTX1Q86Y01 620 aa10.62□□□□□ -0.71
CCDC38-202ENST00000546386 CLEC1AQ8NC01 280 aa10.62□□□□□ -0.71
CCDC38-202ENST00000546386 ADAMTS14Q8WXS8 1223 aa10.62□□□□□ -0.71
CCDC38-202ENST00000546386 AUNIPQ9H7T9 357 aa10.62□□□□□ -0.71
CCDC38-202ENST00000546386 TCF7L1Q9HCS4 588 aa10.62□□□□□ -0.71
CCDC38-202ENST00000546386 PLSCR2Q9NRY7 297 aa10.62□□□□□ -0.71
CCDC38-202ENST00000546386 FAIMQ9NVQ4 179 aa10.62□□□□□ -0.71
CCDC38-202ENST00000546386 VSX1Q9NZR4 365 aaPredicted RBP10.62□□□□□ -0.71
CCDC38-202ENST00000546386 ZNF319Q9P2F9 582 aa10.62□□□□□ -0.71
CCDC38-202ENST00000546386 TAF4O00268 1085 aa10.61□□□□□ -0.71
CCDC38-202ENST00000546386 HPP00738 406 aa10.61□□□□□ -0.71
CCDC38-202ENST00000546386 TACSTD2P09758 323 aa10.61□□□□□ -0.71
CCDC38-202ENST00000546386 PGA4P0DJD7 388 aa10.61□□□□□ -0.71
CCDC38-202ENST00000546386 PGA3P0DJD8 388 aa10.61□□□□□ -0.71
CCDC38-202ENST00000546386 MSX1P28360 303 aa10.61□□□□□ -0.71
CCDC38-202ENST00000546386 RFX2P48378 723 aa10.61□□□□□ -0.71
CCDC38-202ENST00000546386 BCAP31P51572 246 aa10.61□□□□□ -0.71
CCDC38-202ENST00000546386 SELENBP1Q13228 472 aa10.61□□□□□ -0.71
CCDC38-202ENST00000546386 HBMQ6B0K9 141 aa10.61□□□□□ -0.71
CCDC38-202ENST00000546386 TUBA3EQ6PEY2 450 aa10.61□□□□□ -0.71
CCDC38-202ENST00000546386 STAC2Q6ZMT1 411 aa10.61□□□□□ -0.71
CCDC38-202ENST00000546386 LUZP2Q86TE4 346 aa10.61□□□□□ -0.71
CCDC38-202ENST00000546386 ZNF679Q8IYX0 411 aa10.61□□□□□ -0.71
CCDC38-202ENST00000546386 GTPBP8Q8N3Z3 284 aaPredicted RBP10.61□□□□□ -0.71
CCDC38-202ENST00000546386 OR10H5Q8NGA6 315 aa10.61□□□□□ -0.71
CCDC38-202ENST00000546386 OR10D3Q8NH80 312 aa10.61□□□□□ -0.71
CCDC38-202ENST00000546386 ZDHHC16Q969W1 377 aa10.61□□□□□ -0.71
CCDC38-202ENST00000546386 MIB2Q96AX9 1013 aa10.61□□□□□ -0.71
CCDC38-202ENST00000546386 SLC25A44Q96H78 314 aaPredicted RBP10.61□□□□□ -0.71
CCDC38-202ENST00000546386 OR8B4Q96RC9 309 aa10.61□□□□□ -0.71
CCDC38-202ENST00000546386 DDA1Q9BW61 102 aa10.61□□□□□ -0.71
CCDC38-202ENST00000546386 OR5H15A6NDH6 313 aa10.61□□□□□ -0.71
CCDC38-202ENST00000546386 SMAD9O15198 467 aaKnown RBP10.61□□□□□ -0.71
CCDC38-202ENST00000546386 FZD7O75084 574 aa10.61□□□□□ -0.71
CCDC38-202ENST00000546386 H2BFMP0C1H6 154 aa10.61□□□□□ -0.71
CCDC38-202ENST00000546386 CRABP1P29762 137 aa10.61□□□□□ -0.71
CCDC38-202ENST00000546386 MTNR1BP49286 362 aa10.61□□□□□ -0.71
CCDC38-202ENST00000546386 NOVA1P51513 510 aaKnown RBP10.61□□□□□ -0.71
CCDC38-202ENST00000546386 EFNB2P52799 333 aa10.61□□□□□ -0.71
CCDC38-202ENST00000546386 FOXG1P55316 489 aaPredicted RBP10.61□□□□□ -0.71
CCDC38-202ENST00000546386 TAS2R43P59537 309 aa10.61□□□□□ -0.71
CCDC38-202ENST00000546386 CSRP2Q16527 193 aa10.61□□□□□ -0.71
CCDC38-202ENST00000546386 RTN4RL2Q86UN3 420 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms