RNA–Protein interactions for RNA: ENST00000545889.5

CLIP1-218, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 4,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-218ENST00000545889 TRIM77I1YAP6 450 aa7.85□□□□□ -1.15
CLIP1-218ENST00000545889 PCDH17O14917 1159 aa7.85□□□□□ -1.15
CLIP1-218ENST00000545889 RGS11O94810 467 aa7.85□□□□□ -1.15
CLIP1-218ENST00000545889 YIF1AO95070 293 aa7.85□□□□□ -1.15
CLIP1-218ENST00000545889 DEFA4P12838 97 aa7.85□□□□□ -1.15
CLIP1-218ENST00000545889 RAB5BP61020 215 aa7.85□□□□□ -1.15
CLIP1-218ENST00000545889 GPR176Q14439 515 aa7.85□□□□□ -1.15
CLIP1-218ENST00000545889 PLK5Q496M5 336 aa7.85□□□□□ -1.15
CLIP1-218ENST00000545889 PRSS48Q7RTY5 328 aa7.85□□□□□ -1.15
CLIP1-218ENST00000545889 KDM8Q8N371 416 aa7.85□□□□□ -1.15
CLIP1-218ENST00000545889 OR9Q2Q8NGE9 314 aa7.85□□□□□ -1.15
CLIP1-218ENST00000545889 UBE2FQ969M7 185 aa7.85□□□□□ -1.15
CLIP1-218ENST00000545889 OSGIN1Q9UJX0 560 aa7.85□□□□□ -1.15
CLIP1-218ENST00000545889 POLEQ07864 2286 aa7.84□□□□□ -1.15
CLIP1-218ENST00000545889 CKAP5Q14008 2032 aa7.84□□□□□ -1.15
CLIP1-218ENST00000545889 SH2D7A6NKC9 451 aaPredicted RBP7.84□□□□□ -1.15
CLIP1-218ENST00000545889 M0QZ24 198 aa7.84□□□□□ -1.15
CLIP1-218ENST00000545889 CBR3O75828 277 aa7.84□□□□□ -1.15
CLIP1-218ENST00000545889 APOBEC1P41238 236 aaKnown RBP7.84□□□□□ -1.15
CLIP1-218ENST00000545889 P2RX1P51575 399 aa7.84□□□□□ -1.15
CLIP1-218ENST00000545889 ZNF273Q14593 569 aa7.84□□□□□ -1.15
CLIP1-218ENST00000545889 GPR157Q5UAW9 335 aa7.84□□□□□ -1.15
CLIP1-218ENST00000545889 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.84□□□□□ -1.15
CLIP1-218ENST00000545889 COMTD1Q86VU5 262 aa7.84□□□□□ -1.15
CLIP1-218ENST00000545889 BEST3Q8N1M1 668 aa7.84□□□□□ -1.15
CLIP1-218ENST00000545889 CISD2Q8N5K1 135 aaKnown RBP7.84□□□□□ -1.15
CLIP1-218ENST00000545889 OR1S1Q8NH92 325 aa7.84□□□□□ -1.15
CLIP1-218ENST00000545889 MIB2Q96AX9 1013 aa7.84□□□□□ -1.15
CLIP1-218ENST00000545889 OR2A14Q96R47 310 aa7.84□□□□□ -1.15
CLIP1-218ENST00000545889 ANAPC1Q9H1A4 1944 aa7.84□□□□□ -1.15
CLIP1-218ENST00000545889 ARHGEF17Q96PE2 2063 aaPredicted RBP7.84□□□□□ -1.15
CLIP1-218ENST00000545889 SCN3AQ9NY46 2000 aa7.84□□□□□ -1.15
CLIP1-218ENST00000545889 A0A1W2PNR3 127 aa7.84□□□□□ -1.15
CLIP1-218ENST00000545889 CLDN24A6NM45 220 aa7.84□□□□□ -1.15
CLIP1-218ENST00000545889 CEBPZOSA8MTT3 80 aa7.84□□□□□ -1.15
CLIP1-218ENST00000545889 H7C1C5 153 aa7.84□□□□□ -1.15
CLIP1-218ENST00000545889 HSPB6O14558 160 aa7.84□□□□□ -1.15
CLIP1-218ENST00000545889 DOK2O60496 412 aa7.84□□□□□ -1.15
CLIP1-218ENST00000545889 AMY2AP04746 511 aa7.84□□□□□ -1.15
CLIP1-218ENST00000545889 HSD17B1P14061 328 aa7.84□□□□□ -1.15
CLIP1-218ENST00000545889 AKR1C4P17516 323 aa7.84□□□□□ -1.15
CLIP1-218ENST00000545889 PRSS3P35030 304 aa7.84□□□□□ -1.15
CLIP1-218ENST00000545889 PSMB10P40306 273 aa7.84□□□□□ -1.15
CLIP1-218ENST00000545889 LSSP48449 732 aa7.84□□□□□ -1.15
CLIP1-218ENST00000545889 CX3CR1P49238 355 aa7.84□□□□□ -1.15
CLIP1-218ENST00000545889 LCN6P62502 163 aa7.84□□□□□ -1.15
CLIP1-218ENST00000545889 KEAP1Q14145 624 aa7.84□□□□□ -1.15
CLIP1-218ENST00000545889 OR8G1Q15617 311 aa7.84□□□□□ -1.15
CLIP1-218ENST00000545889 CPZQ66K79 652 aa7.84□□□□□ -1.15
CLIP1-218ENST00000545889 SLC16A11Q8NCK7 471 aa7.84□□□□□ -1.15
CLIP1-218ENST00000545889 OR2A1Q8NGT9 310 aa7.84□□□□□ -1.15
CLIP1-218ENST00000545889 OR52N5Q8NH56 324 aa7.84□□□□□ -1.15
CLIP1-218ENST00000545889 ELMOD3Q96FG2 381 aa7.84□□□□□ -1.15
CLIP1-218ENST00000545889 FAM173AQ9BQD7 235 aa7.84□□□□□ -1.15
CLIP1-218ENST00000545889 ALG8Q9BVK2 526 aa7.84□□□□□ -1.15
CLIP1-218ENST00000545889 AMBRA1Q9C0C7 1298 aa7.84□□□□□ -1.15
CLIP1-218ENST00000545889 VAPAQ9P0L0 249 aa7.84□□□□□ -1.15
CLIP1-218ENST00000545889 FBXL4Q9UKA2 621 aa7.84□□□□□ -1.15
CLIP1-218ENST00000545889 HSPE1-MOB4S4R3N1 261 aa7.84□□□□□ -1.15
CLIP1-218ENST00000545889 PLXNA3P51805 1871 aa7.84□□□□□ -1.15
CLIP1-218ENST00000545889 IGHV3-64DA0A0J9YX35 117 aa7.84□□□□□ -1.15
CLIP1-218ENST00000545889 A0A1B0GWA3 101 aa7.84□□□□□ -1.15
CLIP1-218ENST00000545889 SPINT2O43291 252 aa7.84□□□□□ -1.15
CLIP1-218ENST00000545889 ZNF14P17017 642 aaPredicted RBP7.84□□□□□ -1.15
CLIP1-218ENST00000545889 RPP30P78346 268 aaKnown RBP7.84□□□□□ -1.15
CLIP1-218ENST00000545889 SYT6Q5T7P8 510 aaPredicted RBP7.84□□□□□ -1.15
CLIP1-218ENST00000545889 ZNF468Q5VIY5 522 aaPredicted RBP7.84□□□□□ -1.15
CLIP1-218ENST00000545889 C22orf42Q6IC83 251 aa7.84□□□□□ -1.15
CLIP1-218ENST00000545889 PDZD9Q8IXQ8 264 aa7.84□□□□□ -1.15
CLIP1-218ENST00000545889 ENTHD1Q8IYW4 607 aa7.84□□□□□ -1.15
CLIP1-218ENST00000545889 ASB17Q8WXJ9 295 aa7.84□□□□□ -1.15
CLIP1-218ENST00000545889 HSD17B8Q92506 261 aa7.84□□□□□ -1.15
CLIP1-218ENST00000545889 RND1Q92730 232 aa7.84□□□□□ -1.15
CLIP1-218ENST00000545889 RNF170Q96K19 258 aa7.84□□□□□ -1.15
CLIP1-218ENST00000545889 CPPED1Q9BRF8 314 aaPredicted RBP7.84□□□□□ -1.15
CLIP1-218ENST00000545889 MAGIXQ9H6Y5 334 aa7.84□□□□□ -1.15
CLIP1-218ENST00000545889 EGLN3Q9H6Z9 239 aa7.84□□□□□ -1.15
CLIP1-218ENST00000545889 POMT2Q9UKY4 750 aa7.84□□□□□ -1.15
CLIP1-218ENST00000545889 PI4KAP42356 2102 aa7.84□□□□□ -1.15
CLIP1-218ENST00000545889 IGHV1OR21-1A0A087WYE8 117 aa7.83□□□□□ -1.16
CLIP1-218ENST00000545889 ANKRD61A6NGH8 418 aa7.83□□□□□ -1.16
CLIP1-218ENST00000545889 C1orf196B1AJZ1 125 aa7.83□□□□□ -1.16
CLIP1-218ENST00000545889 KLK8O60259 260 aa7.83□□□□□ -1.16
CLIP1-218ENST00000545889 ETHE1O95571 254 aa7.83□□□□□ -1.16
CLIP1-218ENST00000545889 PPICP45877 212 aa7.83□□□□□ -1.16
CLIP1-218ENST00000545889 HOXA1P49639 335 aaPredicted RBP7.83□□□□□ -1.16
CLIP1-218ENST00000545889 CAV2P51636 162 aa7.83□□□□□ -1.16
CLIP1-218ENST00000545889 STARD6P59095 220 aa7.83□□□□□ -1.16
CLIP1-218ENST00000545889 BTG2P78543 158 aa7.83□□□□□ -1.16
CLIP1-218ENST00000545889 SPOCK1Q08629 439 aa7.83□□□□□ -1.16
CLIP1-218ENST00000545889 MPEG1Q2M385 716 aa7.83□□□□□ -1.16
CLIP1-218ENST00000545889 NPSR1Q6W5P4 371 aa7.83□□□□□ -1.16
CLIP1-218ENST00000545889 MEX3BQ6ZN04 569 aaKnown RBP7.83□□□□□ -1.16
CLIP1-218ENST00000545889 ZNF367Q7RTV3 350 aa7.83□□□□□ -1.16
CLIP1-218ENST00000545889 ZNF454Q8N9F8 522 aa7.83□□□□□ -1.16
CLIP1-218ENST00000545889 DMBX1Q8NFW5 382 aa7.83□□□□□ -1.16
CLIP1-218ENST00000545889 OR13C9Q8NGT0 318 aa7.83□□□□□ -1.16
CLIP1-218ENST00000545889 OR5J2Q8NH18 312 aa7.83□□□□□ -1.16
CLIP1-218ENST00000545889 OR5W2Q8NH69 310 aa7.83□□□□□ -1.16
CLIP1-218ENST00000545889 ELP4Q96EB1 424 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms