RNA–Protein interactions for RNA: ENST00000544872.1

CIT-216, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 524 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-216ENST00000544872 GINS1Q14691 196 aa8.29□□□□□ -1.08
CIT-216ENST00000544872 SNAPC1Q16533 368 aa8.29□□□□□ -1.08
CIT-216ENST00000544872 MOGQ16653 247 aa8.29□□□□□ -1.08
CIT-216ENST00000544872 MESTQ5EB52 335 aa8.29□□□□□ -1.08
CIT-216ENST00000544872 AGAP6Q5VW22 663 aa8.29□□□□□ -1.08
CIT-216ENST00000544872 SLC25A47Q6Q0C1 308 aa8.29□□□□□ -1.08
CIT-216ENST00000544872 SEZ6L2Q6UXD5 910 aa8.29□□□□□ -1.08
CIT-216ENST00000544872 THSD4Q6ZMP0 1018 aa8.29□□□□□ -1.08
CIT-216ENST00000544872 ZBTB49Q6ZSB9 765 aa8.29□□□□□ -1.08
CIT-216ENST00000544872 FAM122BQ7Z309 247 aa8.29□□□□□ -1.08
CIT-216ENST00000544872 FBXL14Q8N1E6 418 aa8.29□□□□□ -1.08
CIT-216ENST00000544872 PARP8Q8N3A8 854 aa8.29□□□□□ -1.08
CIT-216ENST00000544872 WDR31Q8NA23 367 aa8.29□□□□□ -1.08
CIT-216ENST00000544872 GJC3Q8NFK1 279 aa8.29□□□□□ -1.08
CIT-216ENST00000544872 IPCEF1Q8WWN9 437 aaPredicted RBP8.29□□□□□ -1.08
CIT-216ENST00000544872 FBXW5Q969U6 566 aa8.29□□□□□ -1.08
CIT-216ENST00000544872 SH3GL3Q99963 347 aa8.29□□□□□ -1.08
CIT-216ENST00000544872 NIPSNAP1Q9BPW8 284 aa8.29□□□□□ -1.08
CIT-216ENST00000544872 NUAK2Q9H093 628 aa8.29□□□□□ -1.08
CIT-216ENST00000544872 CXorf56Q9H5V9 222 aa8.29□□□□□ -1.08
CIT-216ENST00000544872 UBTD1Q9HAC8 227 aa8.29□□□□□ -1.08
CIT-216ENST00000544872 RPRD1BQ9NQG5 326 aaKnown RBP8.29□□□□□ -1.08
CIT-216ENST00000544872 BEX4Q9NWD9 120 aaPredicted RBP8.29□□□□□ -1.08
CIT-216ENST00000544872 KCNG2Q9UJ96 466 aa8.29□□□□□ -1.08
CIT-216ENST00000544872 NDRG4Q9ULP0 352 aaKnown RBP8.29□□□□□ -1.08
CIT-216ENST00000544872 OAZ3Q9UMX2 235 aa8.29□□□□□ -1.08
CIT-216ENST00000544872 MOKQ9UQ07 419 aa8.29□□□□□ -1.08
CIT-216ENST00000544872 SAC3D1A6NKF1 404 aa8.28□□□□□ -1.08
CIT-216ENST00000544872 H7C1C5 153 aa8.28□□□□□ -1.08
CIT-216ENST00000544872 SEC14L2O76054 403 aa8.28□□□□□ -1.08
CIT-216ENST00000544872 MT-ND5P03915 603 aa8.28□□□□□ -1.08
CIT-216ENST00000544872 SERPINA5P05154 406 aa8.28□□□□□ -1.08
CIT-216ENST00000544872 CDAP32320 146 aa8.28□□□□□ -1.08
CIT-216ENST00000544872 CDKN2AP42771 156 aaKnown RBP8.28□□□□□ -1.08
CIT-216ENST00000544872 FABP6P51161 128 aa8.28□□□□□ -1.08
CIT-216ENST00000544872 IDH3GP51553 393 aaPredicted RBP8.28□□□□□ -1.08
CIT-216ENST00000544872 CDH11P55287 796 aa8.28□□□□□ -1.08
CIT-216ENST00000544872 FOXG1P55316 489 aaPredicted RBP8.28□□□□□ -1.08
CIT-216ENST00000544872 CDC42P60953 191 aa8.28□□□□□ -1.08
CIT-216ENST00000544872 RPS7P62081 194 aaKnown RBP8.28□□□□□ -1.08
CIT-216ENST00000544872 LCN6P62502 163 aa8.28□□□□□ -1.08
CIT-216ENST00000544872 ECH1Q13011 328 aa8.28□□□□□ -1.08
CIT-216ENST00000544872 AQP6Q13520 282 aa8.28□□□□□ -1.08
CIT-216ENST00000544872 FHL1Q13642 323 aa8.28□□□□□ -1.08
CIT-216ENST00000544872 TAF13Q15543 124 aa8.28□□□□□ -1.08
CIT-216ENST00000544872 PGGHGQ32M88 737 aa8.28□□□□□ -1.08
CIT-216ENST00000544872 CHRFAM7AQ494W8 412 aa8.28□□□□□ -1.08
CIT-216ENST00000544872 PHYHD1Q5SRE7 291 aa8.28□□□□□ -1.08
CIT-216ENST00000544872 FAHD1Q6P587 224 aa8.28□□□□□ -1.08
CIT-216ENST00000544872 LINGO2Q7L985 606 aa8.28□□□□□ -1.08
CIT-216ENST00000544872 MDP1Q86V88 176 aa8.28□□□□□ -1.08
CIT-216ENST00000544872 SKA3Q8IX90 412 aa8.28□□□□□ -1.08
CIT-216ENST00000544872 PQLC1Q8N2U9 271 aa8.28□□□□□ -1.08
CIT-216ENST00000544872 SDR9C7Q8NEX9 313 aa8.28□□□□□ -1.08
CIT-216ENST00000544872 TMEM171Q8WVE6 324 aa8.28□□□□□ -1.08
CIT-216ENST00000544872 AKAP1Q92667 903 aaKnown RBP eCLIP8.28□□□□□ -1.08
CIT-216ENST00000544872 TRMT61AQ96FX7 289 aaKnown RBP8.28□□□□□ -1.08
CIT-216ENST00000544872 COG8Q96MW5 612 aa8.28□□□□□ -1.08
CIT-216ENST00000544872 MYCBPQ99417 103 aaPredicted RBP8.28□□□□□ -1.08
CIT-216ENST00000544872 PKP2Q99959 881 aa8.28□□□□□ -1.08
CIT-216ENST00000544872 RACGAP1Q9H0H5 632 aa8.28□□□□□ -1.08
CIT-216ENST00000544872 VCX3BQ9H321 246 aa8.28□□□□□ -1.08
CIT-216ENST00000544872 POLE4Q9NR33 117 aa8.28□□□□□ -1.08
CIT-216ENST00000544872 CMC2Q9NRP2 79 aa8.28□□□□□ -1.08
CIT-216ENST00000544872 IMPAD1Q9NX62 359 aa8.28□□□□□ -1.08
CIT-216ENST00000544872 VNN3Q9NY84 501 aa8.28□□□□□ -1.08
CIT-216ENST00000544872 TVP23BQ9NYZ1 205 aa8.28□□□□□ -1.08
CIT-216ENST00000544872 CISD1Q9NZ45 108 aaKnown RBP8.28□□□□□ -1.08
CIT-216ENST00000544872 B9D1Q9UPM9 204 aa8.28□□□□□ -1.08
CIT-216ENST00000544872 COA3Q9Y2R0 106 aaPredicted RBP8.28□□□□□ -1.08
CIT-216ENST00000544872 PMF1-BGLAPU3KQ54 211 aa8.28□□□□□ -1.08
CIT-216ENST00000544872 ARID1AO14497 2285 aa8.28□□□□□ -1.08
CIT-216ENST00000544872 NCKAP5O14513 1909 aa8.27□□□□□ -1.09
CIT-216ENST00000544872 DPRXA6NFQ7 191 aa8.27□□□□□ -1.09
CIT-216ENST00000544872 DEFB108AA8MXU0 73 aa8.27□□□□□ -1.09
CIT-216ENST00000544872 BHLHE40O14503 412 aa8.27□□□□□ -1.09
CIT-216ENST00000544872 HS3ST1O14792 307 aa8.27□□□□□ -1.09
CIT-216ENST00000544872 IGKV3-15P01624 115 aa8.27□□□□□ -1.09
CIT-216ENST00000544872 CCNOP22674 350 aa8.27□□□□□ -1.09
CIT-216ENST00000544872 ATP6V1E1P36543 226 aa8.27□□□□□ -1.09
CIT-216ENST00000544872 ALDH3A2P51648 485 aa8.27□□□□□ -1.09
CIT-216ENST00000544872 SLC25A1P53007 311 aa8.27□□□□□ -1.09
CIT-216ENST00000544872 TEKQ02763 1124 aa8.27□□□□□ -1.09
CIT-216ENST00000544872 FMODQ06828 376 aa8.27□□□□□ -1.09
CIT-216ENST00000544872 ZNF672Q499Z4 452 aaPredicted RBP8.27□□□□□ -1.09
CIT-216ENST00000544872 KLHL12Q53G59 568 aa8.27□□□□□ -1.09
CIT-216ENST00000544872 LCN1P1Q5VSP4 162 aa8.27□□□□□ -1.09
CIT-216ENST00000544872 ADAM5Q6NVV9 412 aa8.27□□□□□ -1.09
CIT-216ENST00000544872 ZNF544Q6NX49 715 aa8.27□□□□□ -1.09
CIT-216ENST00000544872 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.27□□□□□ -1.09
CIT-216ENST00000544872 ZNF611Q8N823 705 aa8.27□□□□□ -1.09
CIT-216ENST00000544872 ZNF555Q8NEP9 628 aa8.27□□□□□ -1.09
CIT-216ENST00000544872 SLC30A7Q8NEW0 376 aa8.27□□□□□ -1.09
CIT-216ENST00000544872 OR5L1Q8NGL2 311 aa8.27□□□□□ -1.09
CIT-216ENST00000544872 OR6K6Q8NGW6 343 aa8.27□□□□□ -1.09
CIT-216ENST00000544872 SMAP2Q8WU79 429 aaPredicted RBP8.27□□□□□ -1.09
CIT-216ENST00000544872 RFKQ969G6 155 aa8.27□□□□□ -1.09
CIT-216ENST00000544872 ZNF837Q96EG3 531 aaPredicted RBP8.27□□□□□ -1.09
CIT-216ENST00000544872 CCL19Q99731 98 aa8.27□□□□□ -1.09
CIT-216ENST00000544872 DHRS9Q9BPW9 319 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms