RNA–Protein interactions for RNA: ENST00000544040.5

CHD4-210, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD4, Length 6,514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-210ENST00000544040 REEP5Q00765 189 aa14.17□□□□□ -0.14
CHD4-210ENST00000544040 SYT6Q5T7P8 510 aaPredicted RBP14.17□□□□□ -0.14
CHD4-210ENST00000544040 PRR27Q6MZM9 219 aa14.17□□□□□ -0.14
CHD4-210ENST00000544040 LILRA3Q8N6C8 439 aaPredicted RBP14.17□□□□□ -0.14
CHD4-210ENST00000544040 ARSGQ96EG1 525 aa14.17□□□□□ -0.14
CHD4-210ENST00000544040 SLC22A11Q9NSA0 550 aa14.17□□□□□ -0.14
CHD4-210ENST00000544040 ZMAT5Q9UDW3 170 aaKnown RBP14.17□□□□□ -0.14
CHD4-210ENST00000544040 KCNG2Q9UJ96 466 aa14.17□□□□□ -0.14
CHD4-210ENST00000544040 hCG_1809904A0A1W2PP81 198 aa14.16□□□□□ -0.14
CHD4-210ENST00000544040 A0A1W2PPE2 198 aa14.16□□□□□ -0.14
CHD4-210ENST00000544040 A0A1W2PR64 198 aa14.16□□□□□ -0.14
CHD4-210ENST00000544040 A0A1W2PRV1 198 aa14.16□□□□□ -0.14
CHD4-210ENST00000544040 ZNF727A8MUV8 499 aa14.16□□□□□ -0.14
CHD4-210ENST00000544040 CCL11P51671 97 aa14.16□□□□□ -0.14
CHD4-210ENST00000544040 CORO6Q6QEF8 472 aa14.16□□□□□ -0.14
CHD4-210ENST00000544040 GTF2H5Q6ZYL4 71 aa14.16□□□□□ -0.14
CHD4-210ENST00000544040 OR52N1Q8NH53 320 aa14.16□□□□□ -0.14
CHD4-210ENST00000544040 OR51E1Q8TCB6 317 aa14.16□□□□□ -0.14
CHD4-210ENST00000544040 NEURL3Q96EH8 262 aa14.16□□□□□ -0.14
CHD4-210ENST00000544040 SLC35E1Q96K37 410 aa14.16□□□□□ -0.14
CHD4-210ENST00000544040 MS4A8Q9BY19 250 aa14.16□□□□□ -0.14
CHD4-210ENST00000544040 MYOM1P52179 1685 aa14.16□□□□□ -0.14
CHD4-210ENST00000544040 SETD1AO15047 1707 aaKnown RBP14.16□□□□□ -0.14
CHD4-210ENST00000544040 RGS11O94810 467 aa14.16□□□□□ -0.14
CHD4-210ENST00000544040 OR5G3P0C626 314 aa14.16□□□□□ -0.14
CHD4-210ENST00000544040 PIPP12273 146 aaPredicted RBP14.16□□□□□ -0.14
CHD4-210ENST00000544040 AKR1C3P42330 323 aa14.16□□□□□ -0.14
CHD4-210ENST00000544040 CSNK1EP49674 416 aaKnown RBP14.16□□□□□ -0.14
CHD4-210ENST00000544040 OR1M1Q8NGA1 313 aa14.16□□□□□ -0.14
CHD4-210ENST00000544040 OR13C5Q8NGS8 318 aa14.16□□□□□ -0.14
CHD4-210ENST00000544040 OR51I2Q9H344 312 aa14.16□□□□□ -0.14
CHD4-210ENST00000544040 TMPRSS5Q9H3S3 457 aa14.16□□□□□ -0.14
CHD4-210ENST00000544040 RIMS4Q9H426 269 aaPredicted RBP14.16□□□□□ -0.14
CHD4-210ENST00000544040 RIMBP3CA6NJZ7 1639 aa14.16□□□□□ -0.14
CHD4-210ENST00000544040 RIMBP3BA6NNM3 1639 aa14.16□□□□□ -0.14
CHD4-210ENST00000544040 RIMBP3Q9UFD9 1639 aa14.16□□□□□ -0.14
CHD4-210ENST00000544040 ACOT8O14734 319 aa14.16□□□□□ -0.14
CHD4-210ENST00000544040 HRO43593 1189 aa14.16□□□□□ -0.14
CHD4-210ENST00000544040 CTNSO60931 367 aa14.16□□□□□ -0.14
CHD4-210ENST00000544040 C1QBP02746 253 aa14.16□□□□□ -0.14
CHD4-210ENST00000544040 CSN1S1P47710 185 aa14.16□□□□□ -0.14
CHD4-210ENST00000544040 CSNK1DP48730 415 aa14.16□□□□□ -0.14
CHD4-210ENST00000544040 CCSMST1Q4G0I0 132 aa14.16□□□□□ -0.14
CHD4-210ENST00000544040 GOT1L1Q8NHS2 421 aaPredicted RBP14.16□□□□□ -0.14
CHD4-210ENST00000544040 RXFP4Q8TDU9 374 aa14.16□□□□□ -0.14
CHD4-210ENST00000544040 FBXW5Q969U6 566 aa14.16□□□□□ -0.14
CHD4-210ENST00000544040 CHRNA9Q9UGM1 479 aa14.16□□□□□ -0.14
CHD4-210ENST00000544040 CXCL12P48061 93 aa14.16□□□□□ -0.14
CHD4-210ENST00000544040 BAK1Q16611 211 aa14.16□□□□□ -0.14
CHD4-210ENST00000544040 MISPQ8IVT2 679 aa14.16□□□□□ -0.14
CHD4-210ENST00000544040 SPACA5Q96QH8 159 aa14.16□□□□□ -0.14
CHD4-210ENST00000544040 CLSTN3Q9BQT9 956 aa14.16□□□□□ -0.14
CHD4-210ENST00000544040 PDLIM7Q9NR12 457 aa14.16□□□□□ -0.14
CHD4-210ENST00000544040 SIRPB1O00241 398 aa14.16□□□□□ -0.14
CHD4-210ENST00000544040 ZNF354AO60765 605 aaPredicted RBP14.16□□□□□ -0.14
CHD4-210ENST00000544040 GIPP09681 153 aaPredicted RBP14.16□□□□□ -0.14
CHD4-210ENST00000544040 CT45A10P0DMU9 189 aa14.16□□□□□ -0.14
CHD4-210ENST00000544040 ACHEP22303 614 aa14.16□□□□□ -0.14
CHD4-210ENST00000544040 PCBP3P57721 371 aaKnown RBP14.16□□□□□ -0.14
CHD4-210ENST00000544040 BAMBIQ13145 260 aa14.16□□□□□ -0.14
CHD4-210ENST00000544040 CTSFQ9UBX1 484 aa14.16□□□□□ -0.14
CHD4-210ENST00000544040 FLVCR1Q9Y5Y0 555 aa14.16□□□□□ -0.14
CHD4-210ENST00000544040 BAZ2AQ9UIF9 1905 aaKnown RBP14.16□□□□□ -0.14
CHD4-210ENST00000544040 UBR1Q8IWV7 1749 aa14.16□□□□□ -0.14
CHD4-210ENST00000544040 ST8SIA3O43173 380 aa14.15□□□□□ -0.14
CHD4-210ENST00000544040 ALX3O95076 343 aa14.15□□□□□ -0.14
CHD4-210ENST00000544040 CD14P08571 375 aa14.15□□□□□ -0.14
CHD4-210ENST00000544040 OTPQ5XKR4 325 aa14.15□□□□□ -0.14
CHD4-210ENST00000544040 SRRQ9GZT4 340 aa14.15□□□□□ -0.14
CHD4-210ENST00000544040 CDCP1Q9H5V8 836 aa14.15□□□□□ -0.14
CHD4-210ENST00000544040 TRIM77I1YAP6 450 aa14.15□□□□□ -0.14
CHD4-210ENST00000544040 CER1O95813 267 aa14.15□□□□□ -0.14
CHD4-210ENST00000544040 C1orf140Q5VVS0 124 aa14.15□□□□□ -0.14
CHD4-210ENST00000544040 RPUSD3Q6P087 351 aaKnown RBP14.15□□□□□ -0.14
CHD4-210ENST00000544040 SLC35A4Q96G79 324 aa14.15□□□□□ -0.14
CHD4-210ENST00000544040 C12orf57Q99622 126 aa14.15□□□□□ -0.14
CHD4-210ENST00000544040 C1QTNF3Q9BXJ4 246 aa14.15□□□□□ -0.14
CHD4-210ENST00000544040 GAR1Q9NY12 217 aaKnown RBP14.15□□□□□ -0.14
CHD4-210ENST00000544040 FAM208AQ9UK61 1670 aaKnown RBP14.15□□□□□ -0.14
CHD4-210ENST00000544040 SEMG1P04279 462 aa14.15□□□□□ -0.14
CHD4-210ENST00000544040 FABP9Q0Z7S8 132 aa14.15□□□□□ -0.14
CHD4-210ENST00000544040 TAZQ16635 292 aa14.15□□□□□ -0.14
CHD4-210ENST00000544040 SLC16A11Q8NCK7 471 aa14.15□□□□□ -0.14
CHD4-210ENST00000544040 MBOAT4Q96T53 435 aa14.15□□□□□ -0.14
CHD4-210ENST00000544040 APH1AQ96BI3 265 aa14.15□□□□□ -0.14
CHD4-210ENST00000544040 SLCO1B1Q9Y6L6 691 aa14.15□□□□□ -0.14
CHD4-210ENST00000544040 AKR7A2O43488 359 aa14.15□□□□□ -0.14
CHD4-210ENST00000544040 CD1CP29017 333 aa14.15□□□□□ -0.14
CHD4-210ENST00000544040 ATF6BQ99941 703 aa14.15□□□□□ -0.14
CHD4-210ENST00000544040 DCAF16Q9NXF7 216 aa14.15□□□□□ -0.14
CHD4-210ENST00000544040 MYH15Q9Y2K3 1946 aa14.15□□□□□ -0.14
CHD4-210ENST00000544040 ABCD4O14678 606 aa14.15□□□□□ -0.15
CHD4-210ENST00000544040 TGOLN2O43493 480 aa14.15□□□□□ -0.15
CHD4-210ENST00000544040 RAB13P51153 203 aa14.15□□□□□ -0.15
CHD4-210ENST00000544040 CTU2Q2VPK5 515 aaKnown RBP14.15□□□□□ -0.15
CHD4-210ENST00000544040 TRNP1Q6NT89 227 aa14.15□□□□□ -0.15
CHD4-210ENST00000544040 GJC3Q8NFK1 279 aa14.15□□□□□ -0.15
CHD4-210ENST00000544040 ARPC3O15145 178 aa14.14□□□□□ -0.15
CHD4-210ENST00000544040 SLC25A6P12236 298 aa14.14□□□□□ -0.15
CHD4-210ENST00000544040 ICAM2P13598 275 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms