RNA–Protein interactions for RNA: ENST00000541259.1

DDX55-208, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-208ENST00000541259 GABRA6Q16445 453 aa8.18□□□□□ -1.1
DDX55-208ENST00000541259 KCNMB1Q16558 191 aa8.18□□□□□ -1.1
DDX55-208ENST00000541259 HIKESHIQ53FT3 197 aa8.18□□□□□ -1.1
DDX55-208ENST00000541259 SFRP5Q5T4F7 317 aa8.18□□□□□ -1.1
DDX55-208ENST00000541259 LCN1P1Q5VSP4 162 aa8.18□□□□□ -1.1
DDX55-208ENST00000541259 CORO6Q6QEF8 472 aa8.18□□□□□ -1.1
DDX55-208ENST00000541259 STAC2Q6ZMT1 411 aa8.18□□□□□ -1.1
DDX55-208ENST00000541259 ABHD12BQ7Z5M8 362 aaPredicted RBP8.18□□□□□ -1.1
DDX55-208ENST00000541259 MRGPRGQ86SM5 289 aa8.18□□□□□ -1.1
DDX55-208ENST00000541259 LINC00346Q8IVM7 164 aa8.18□□□□□ -1.1
DDX55-208ENST00000541259 SKA3Q8IX90 412 aa8.18□□□□□ -1.1
DDX55-208ENST00000541259 SLC22A24Q8N4F4 322 aa8.18□□□□□ -1.1
DDX55-208ENST00000541259 OR52I1Q8NGK6 324 aa8.18□□□□□ -1.1
DDX55-208ENST00000541259 LILRB4Q8NHJ6 448 aa8.18□□□□□ -1.1
DDX55-208ENST00000541259 BCL2L2Q92843 193 aaPredicted RBP8.18□□□□□ -1.1
DDX55-208ENST00000541259 TBX5Q99593 518 aa8.18□□□□□ -1.1
DDX55-208ENST00000541259 ZNF416Q9BWM5 594 aa8.18□□□□□ -1.1
DDX55-208ENST00000541259 SIAEQ9HAT2 523 aa8.18□□□□□ -1.1
DDX55-208ENST00000541259 MRPS18AQ9NVS2 196 aaKnown RBP8.18□□□□□ -1.1
DDX55-208ENST00000541259 HAO2Q9NYQ3 351 aa8.18□□□□□ -1.1
DDX55-208ENST00000541259 COQ3Q9NZJ6 369 aa8.18□□□□□ -1.1
DDX55-208ENST00000541259 PSORS1C1Q9UIG5 152 aa8.18□□□□□ -1.1
DDX55-208ENST00000541259 COPS3Q9UNS2 423 aa8.18□□□□□ -1.1
DDX55-208ENST00000541259 SLC5A6Q9Y289 635 aa8.18□□□□□ -1.1
DDX55-208ENST00000541259 EXOGQ9Y2C4 368 aaKnown RBP8.18□□□□□ -1.1
DDX55-208ENST00000541259 MYRFQ9Y2G1 1151 aa8.18□□□□□ -1.1
DDX55-208ENST00000541259 COMMD3-BMI1R4GMX3 469 aa8.18□□□□□ -1.1
DDX55-208ENST00000541259 A0A1W2PR80 420 aa8.17□□□□□ -1.1
DDX55-208ENST00000541259 CIB4A0PJX0 185 aa8.17□□□□□ -1.1
DDX55-208ENST00000541259 SNTNA6NMZ2 147 aa8.17□□□□□ -1.1
DDX55-208ENST00000541259 J3QRE1 110 aa8.17□□□□□ -1.1
DDX55-208ENST00000541259 HRGP04196 525 aa8.17□□□□□ -1.1
DDX55-208ENST00000541259 CCDC159P0C7I6 412 aa8.17□□□□□ -1.1
DDX55-208ENST00000541259 BMP4P12644 408 aa8.17□□□□□ -1.1
DDX55-208ENST00000541259 CD33P20138 364 aa8.17□□□□□ -1.1
DDX55-208ENST00000541259 NPR2P20594 1047 aa8.17□□□□□ -1.1
DDX55-208ENST00000541259 MSR1P21757 451 aa8.17□□□□□ -1.1
DDX55-208ENST00000541259 CD79BP40259 229 aa8.17□□□□□ -1.1
DDX55-208ENST00000541259 ENTPD1P49961 510 aa8.17□□□□□ -1.1
DDX55-208ENST00000541259 TUBA1BP68363 451 aa8.17□□□□□ -1.1
DDX55-208ENST00000541259 TUBA4AP68366 448 aa8.17□□□□□ -1.1
DDX55-208ENST00000541259 ADAM8P78325 824 aa8.17□□□□□ -1.1
DDX55-208ENST00000541259 SRSF1Q07955 248 aaKnown RBP eCLIP8.17□□□□□ -1.12e-6■■□□□ 13
DDX55-208ENST00000541259 ST3GAL4Q11206 333 aa8.17□□□□□ -1.1
DDX55-208ENST00000541259 TMED1Q13445 227 aa8.17□□□□□ -1.1
DDX55-208ENST00000541259 RBM48Q5RL73 367 aaKnown RBP8.17□□□□□ -1.1
DDX55-208ENST00000541259 FAM27BQ5VT28 67 aa8.17□□□□□ -1.1
DDX55-208ENST00000541259 MTFR2Q6P444 385 aa8.17□□□□□ -1.1
DDX55-208ENST00000541259 AHSA2Q719I0 299 aa8.17□□□□□ -1.1
DDX55-208ENST00000541259 TUBA1AQ71U36 451 aa8.17□□□□□ -1.1
DDX55-208ENST00000541259 ZNF627Q7L945 461 aa8.17□□□□□ -1.1
DDX55-208ENST00000541259 BHLHA15Q7RTS1 189 aaPredicted RBP8.17□□□□□ -1.1
DDX55-208ENST00000541259 SLC16A9Q7RTY1 509 aa8.17□□□□□ -1.1
DDX55-208ENST00000541259 DPY19L4Q7Z388 723 aa8.17□□□□□ -1.1
DDX55-208ENST00000541259 CDC20BQ86Y33 519 aa8.17□□□□□ -1.1
DDX55-208ENST00000541259 SLC35F2Q8IXU6 374 aa8.17□□□□□ -1.1
DDX55-208ENST00000541259 RFLNBQ8N5W9 214 aa8.17□□□□□ -1.1
DDX55-208ENST00000541259 WDR31Q8NA23 367 aa8.17□□□□□ -1.1
DDX55-208ENST00000541259 ZNF540Q8NDQ6 660 aa8.17□□□□□ -1.1
DDX55-208ENST00000541259 OR10H5Q8NGA6 315 aa8.17□□□□□ -1.1
DDX55-208ENST00000541259 OR6N2Q8NGY6 317 aa8.17□□□□□ -1.1
DDX55-208ENST00000541259 ITLN2Q8WWU7 325 aaPredicted RBP8.17□□□□□ -1.1
DDX55-208ENST00000541259 ASB5Q8WWX0 329 aa8.17□□□□□ -1.1
DDX55-208ENST00000541259 FBXO17Q96EF6 278 aa8.17□□□□□ -1.1
DDX55-208ENST00000541259 INTS14Q96SY0 518 aa8.17□□□□□ -1.1
DDX55-208ENST00000541259 AMELYQ99218 206 aa8.17□□□□□ -1.1
DDX55-208ENST00000541259 CNN2Q99439 309 aaKnown RBP8.17□□□□□ -1.1
DDX55-208ENST00000541259 TTTY10Q9BZA0 68 aa8.17□□□□□ -1.1
DDX55-208ENST00000541259 FKBP14Q9NWM8 211 aa8.17□□□□□ -1.1
DDX55-208ENST00000541259 GALNT8Q9NY28 637 aa8.17□□□□□ -1.1
DDX55-208ENST00000541259 SCN3BQ9NY72 215 aa8.17□□□□□ -1.1
DDX55-208ENST00000541259 TAS2R16Q9NYV7 291 aa8.17□□□□□ -1.1
DDX55-208ENST00000541259 ZNF224Q9NZL3 707 aa8.17□□□□□ -1.1
DDX55-208ENST00000541259 ERVK-18Q9QC07 812 aa8.17□□□□□ -1.1
DDX55-208ENST00000541259 KCNG2Q9UJ96 466 aa8.17□□□□□ -1.1
DDX55-208ENST00000541259 KLHDC2Q9Y2U9 406 aa8.17□□□□□ -1.1
DDX55-208ENST00000541259 LHFPL6Q9Y693 200 aa8.17□□□□□ -1.1
DDX55-208ENST00000541259 USP9XQ93008 2570 aaPredicted RBP8.17□□□□□ -1.1
DDX55-208ENST00000541259 CADP27708 2225 aa8.17□□□□□ -1.1
DDX55-208ENST00000541259 PRR32B1ATL7 298 aa8.16□□□□□ -1.1
DDX55-208ENST00000541259 MAGEB4O15481 346 aaPredicted RBP8.16□□□□□ -1.1
DDX55-208ENST00000541259 UBR5O95071 2799 aaPredicted RBP8.16□□□□□ -1.1
DDX55-208ENST00000541259 WNT11O96014 354 aa8.16□□□□□ -1.1
DDX55-208ENST00000541259 HLA-HP01893 362 aa8.16□□□□□ -1.1
DDX55-208ENST00000541259 HTR1AP08908 422 aa8.16□□□□□ -1.1
DDX55-208ENST00000541259 CST2P09228 141 aa8.16□□□□□ -1.1
DDX55-208ENST00000541259 SPARCP09486 303 aa8.16□□□□□ -1.1
DDX55-208ENST00000541259 RNF224P0DH78 156 aa8.16□□□□□ -1.1
DDX55-208ENST00000541259 OR8G3PP0DMU2 310 aa8.16□□□□□ -1.1
DDX55-208ENST00000541259 VSIG8P0DPA2 414 aa8.16□□□□□ -1.1
DDX55-208ENST00000541259 ZNF823P16415 610 aa8.16□□□□□ -1.1
DDX55-208ENST00000541259 GRNP28799 593 aaKnown RBP8.16□□□□□ -1.1
DDX55-208ENST00000541259 C21orf33P30042 268 aaPredicted RBP8.16□□□□□ -1.1
DDX55-208ENST00000541259 CCKARP32238 428 aa8.16□□□□□ -1.1
DDX55-208ENST00000541259 ATP6V1E1P36543 226 aa8.16□□□□□ -1.1
DDX55-208ENST00000541259 GUCA1AP43080 201 aaPredicted RBP8.16□□□□□ -1.1
DDX55-208ENST00000541259 ASCL1P50553 236 aa8.16□□□□□ -1.1
DDX55-208ENST00000541259 CHN2P52757 468 aa8.16□□□□□ -1.1
DDX55-208ENST00000541259 BLVRAP53004 296 aa8.16□□□□□ -1.1
DDX55-208ENST00000541259 CDH15P55291 814 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms