RNA–Protein interactions for RNA: ENST00000538970.5

VAMP1-206, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best)

Gene VAMP1, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-206ENST00000538970 PCBD1P61457 104 aa10.6□□□□□ -0.71
VAMP1-206ENST00000538970 PPP1CBP62140 327 aa10.6□□□□□ -0.71
VAMP1-206ENST00000538970 SELENOWP63302 87 aa10.6□□□□□ -0.71
VAMP1-206ENST00000538970 FHL1Q13642 323 aa10.6□□□□□ -0.71
VAMP1-206ENST00000538970 ENDOGQ14249 297 aaKnown RBP10.6□□□□□ -0.71
VAMP1-206ENST00000538970 DCAF12L2Q5VW00 463 aa10.6□□□□□ -0.71
VAMP1-206ENST00000538970 ZNF774Q6NX45 483 aa10.6□□□□□ -0.71
VAMP1-206ENST00000538970 NRMQ8IXM6 262 aa10.6□□□□□ -0.71
VAMP1-206ENST00000538970 MICU2Q8IYU8 434 aa10.6□□□□□ -0.71
VAMP1-206ENST00000538970 ALDH16A1Q8IZ83 802 aa10.6□□□□□ -0.71
VAMP1-206ENST00000538970 OFCC1Q8IZS5 231 aa10.6□□□□□ -0.71
VAMP1-206ENST00000538970 FAM216AQ8WUB2 273 aa10.6□□□□□ -0.71
VAMP1-206ENST00000538970 GEMIN6Q8WXD5 167 aaKnown RBP10.6□□□□□ -0.71
VAMP1-206ENST00000538970 GAL3ST1Q99999 423 aa10.6□□□□□ -0.71
VAMP1-206ENST00000538970 EGLN1Q9GZT9 426 aa10.6□□□□□ -0.71
VAMP1-206ENST00000538970 SAR1AQ9NR31 198 aa10.6□□□□□ -0.71
VAMP1-206ENST00000538970 TIMM10BQ9Y5J6 103 aa10.6□□□□□ -0.71
VAMP1-206ENST00000538970 TRAV27A0A087WT01 109 aa10.59□□□□□ -0.71
VAMP1-206ENST00000538970 A0A1W2PPL8 197 aa10.59□□□□□ -0.71
VAMP1-206ENST00000538970 ELOVL7A1L3X0 281 aa10.59□□□□□ -0.71
VAMP1-206ENST00000538970 TMEM89A2RUT3 159 aa10.59□□□□□ -0.71
VAMP1-206ENST00000538970 ISPDA4D126 451 aa10.59□□□□□ -0.71
VAMP1-206ENST00000538970 A6NIZ1 184 aa10.59□□□□□ -0.71
VAMP1-206ENST00000538970 TRIM77I1YAP6 450 aa10.59□□□□□ -0.71
VAMP1-206ENST00000538970 FSHBP01225 129 aa10.59□□□□□ -0.71
VAMP1-206ENST00000538970 TROVE2P10155 538 aaKnown RBP eCLIP10.59□□□□□ -0.71
VAMP1-206ENST00000538970 MSR1P21757 451 aa10.59□□□□□ -0.71
VAMP1-206ENST00000538970 GATA3P23771 443 aa10.59□□□□□ -0.71
VAMP1-206ENST00000538970 IFNA8P32881 189 aa10.59□□□□□ -0.71
VAMP1-206ENST00000538970 LIPAP38571 399 aa10.59□□□□□ -0.71
VAMP1-206ENST00000538970 RAP1BP61224 184 aa10.59□□□□□ -0.71
VAMP1-206ENST00000538970 RAP1AP62834 184 aa10.59□□□□□ -0.71
VAMP1-206ENST00000538970 SLC3A1Q07837 685 aa10.59□□□□□ -0.71
VAMP1-206ENST00000538970 HNRNPA0Q13151 305 aaKnown RBP10.59□□□□□ -0.71
VAMP1-206ENST00000538970 SPRNQ5BIV9 151 aa10.59□□□□□ -0.71
VAMP1-206ENST00000538970 ZMAT1Q5H9K5 638 aa10.59□□□□□ -0.71
VAMP1-206ENST00000538970 CGB2Q6NT52 195 aa10.59□□□□□ -0.71
VAMP1-206ENST00000538970 ZNF771Q7L3S4 317 aaPredicted RBP10.59□□□□□ -0.71
VAMP1-206ENST00000538970 PEG10Q86TG7 708 aaKnown RBP10.59□□□□□ -0.71
VAMP1-206ENST00000538970 PCYOX1LQ8NBM8 494 aa10.59□□□□□ -0.71
VAMP1-206ENST00000538970 OR51A7Q8NH64 312 aa10.59□□□□□ -0.71
VAMP1-206ENST00000538970 C4orf45Q96LM5 186 aa10.59□□□□□ -0.71
VAMP1-206ENST00000538970 JMJD8Q96S16 334 aa10.59□□□□□ -0.71
VAMP1-206ENST00000538970 DIRC2Q96SL1 478 aa10.59□□□□□ -0.71
VAMP1-206ENST00000538970 SLC6A7Q99884 636 aa10.59□□□□□ -0.71
VAMP1-206ENST00000538970 RBM4Q9BWF3 364 aaKnown RBP10.59□□□□□ -0.71
VAMP1-206ENST00000538970 SUCNR1Q9BXA5 334 aa10.59□□□□□ -0.71
VAMP1-206ENST00000538970 MSL2Q9HCI7 577 aa10.59□□□□□ -0.71
VAMP1-206ENST00000538970 POLE4Q9NR33 117 aa10.59□□□□□ -0.71
VAMP1-206ENST00000538970 GID8Q9NWU2 228 aa10.59□□□□□ -0.71
VAMP1-206ENST00000538970 RHCGQ9UBD6 479 aa10.59□□□□□ -0.71
VAMP1-206ENST00000538970 KLHL21Q9UJP4 597 aa10.59□□□□□ -0.71
VAMP1-206ENST00000538970 ZDHHC8Q9ULC8 765 aa10.59□□□□□ -0.71
VAMP1-206ENST00000538970 NDRG4Q9ULP0 352 aaKnown RBP10.59□□□□□ -0.71
VAMP1-206ENST00000538970 SNX13Q9Y5W8 968 aa10.59□□□□□ -0.71
VAMP1-206ENST00000538970 LOC100653049A0A140TA62 436 aa10.58□□□□□ -0.72
VAMP1-206ENST00000538970 C12orf71A8MTZ7 269 aa10.58□□□□□ -0.72
VAMP1-206ENST00000538970 EFCAB9A8MZ26 197 aa10.58□□□□□ -0.72
VAMP1-206ENST00000538970 H7C1C5 153 aa10.58□□□□□ -0.72
VAMP1-206ENST00000538970 J3KTA2 159 aa10.58□□□□□ -0.72
VAMP1-206ENST00000538970 FFAR1O14842 300 aa10.58□□□□□ -0.72
VAMP1-206ENST00000538970 KRT34O76011 436 aa10.58□□□□□ -0.72
VAMP1-206ENST00000538970 IFNW1P05000 195 aa10.58□□□□□ -0.72
VAMP1-206ENST00000538970 SCG5P05408 212 aa10.58□□□□□ -0.72
VAMP1-206ENST00000538970 GUCA1AP43080 201 aaPredicted RBP10.58□□□□□ -0.72
VAMP1-206ENST00000538970 YAP1P46937 504 aaKnown RBP10.58□□□□□ -0.72
VAMP1-206ENST00000538970 SLC9A3P48764 834 aa10.58□□□□□ -0.72
VAMP1-206ENST00000538970 ARHGDIAP52565 204 aa10.58□□□□□ -0.72
VAMP1-206ENST00000538970 LCN6P62502 163 aa10.58□□□□□ -0.72
VAMP1-206ENST00000538970 LCN2P80188 198 aa10.58□□□□□ -0.72
VAMP1-206ENST00000538970 PRKCDQ05655 676 aa10.58□□□□□ -0.72
VAMP1-206ENST00000538970 TRAM2Q15035 370 aa10.58□□□□□ -0.72
VAMP1-206ENST00000538970 ANKDD1AQ495B1 522 aa10.58□□□□□ -0.72
VAMP1-206ENST00000538970 PDLIM3Q53GG5 364 aaPredicted RBP10.58□□□□□ -0.72
VAMP1-206ENST00000538970 MTX3Q5HYI7 312 aa10.58□□□□□ -0.72
VAMP1-206ENST00000538970 VTCN1Q7Z7D3 282 aa10.58□□□□□ -0.72
VAMP1-206ENST00000538970 SYT9Q86SS6 491 aa10.58□□□□□ -0.72
VAMP1-206ENST00000538970 OAFQ86UD1 273 aa10.58□□□□□ -0.72
VAMP1-206ENST00000538970 FAM156AQ8NDB6 213 aa10.58□□□□□ -0.72
VAMP1-206ENST00000538970 NPEPL1Q8NDH3 523 aa10.58□□□□□ -0.72
VAMP1-206ENST00000538970 OR13C2Q8NGS9 318 aa10.58□□□□□ -0.72
VAMP1-206ENST00000538970 NANPQ8TBE9 248 aa10.58□□□□□ -0.72
VAMP1-206ENST00000538970 LZICQ8WZA0 190 aa10.58□□□□□ -0.72
VAMP1-206ENST00000538970 FNDC11Q9BVV2 318 aa10.58□□□□□ -0.72
VAMP1-206ENST00000538970 ELOVL3Q9HB03 270 aa10.58□□□□□ -0.72
VAMP1-206ENST00000538970 EMC7Q9NPA0 242 aa10.58□□□□□ -0.72
VAMP1-206ENST00000538970 FGFR1OP2Q9NVK5 253 aa10.58□□□□□ -0.72
VAMP1-206ENST00000538970 CMTM6Q9NX76 183 aa10.58□□□□□ -0.72
VAMP1-206ENST00000538970 DCAF16Q9NXF7 216 aa10.58□□□□□ -0.72
VAMP1-206ENST00000538970 UBAP1Q9NZ09 502 aa10.58□□□□□ -0.72
VAMP1-206ENST00000538970 GMPR2Q9P2T1 348 aaKnown RBP10.58□□□□□ -0.72
VAMP1-206ENST00000538970 OPN4Q9UHM6 478 aa10.58□□□□□ -0.72
VAMP1-206ENST00000538970 TANC2Q9HCD6 1990 aa10.57□□□□□ -0.72
VAMP1-206ENST00000538970 CDC42EP2O14613 210 aa10.57□□□□□ -0.72
VAMP1-206ENST00000538970 TIMM8AO60220 97 aaPredicted RBP10.57□□□□□ -0.72
VAMP1-206ENST00000538970 SASH3O75995 380 aa10.57□□□□□ -0.72
VAMP1-206ENST00000538970 PRSS23O95084 383 aa10.57□□□□□ -0.72
VAMP1-206ENST00000538970 ABHD16AO95870 558 aa10.57□□□□□ -0.72
VAMP1-206ENST00000538970 IGHV2-70P01814 119 aa10.57□□□□□ -0.72
VAMP1-206ENST00000538970 COX5BP10606 129 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms