RNA–Protein interactions for RNA: ENST00000538834.5

CD9-208, Transcript of CD9 molecule, humanhuman

TSL 5

Gene CD9, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-208ENST00000538834 TSSK2Q96PF2 358 aa11.8□□□□□ -0.52
CD9-208ENST00000538834 FEVQ99581 238 aa11.8□□□□□ -0.52
CD9-208ENST00000538834 KCNS3Q9BQ31 491 aa11.8□□□□□ -0.52
CD9-208ENST00000538834 NMNAT2Q9BZQ4 307 aa11.8□□□□□ -0.52
CD9-208ENST00000538834 ARMC1Q9NVT9 282 aa11.8□□□□□ -0.52
CD9-208ENST00000538834 DNAJB9Q9UBS3 223 aa11.8□□□□□ -0.52
CD9-208ENST00000538834 COA3Q9Y2R0 106 aaPredicted RBP11.8□□□□□ -0.52
CD9-208ENST00000538834 TIMM10BQ9Y5J6 103 aa11.8□□□□□ -0.52
CD9-208ENST00000538834 FKBP7Q9Y680 259 aa11.8□□□□□ -0.52
CD9-208ENST00000538834 U3KQV3 271 aa11.8□□□□□ -0.52
CD9-208ENST00000538834 GPRIN2O60269 458 aa11.79□□□□□ -0.52
CD9-208ENST00000538834 SLC16A7O60669 478 aa11.79□□□□□ -0.52
CD9-208ENST00000538834 APEX1P27695 318 aaKnown RBP11.79□□□□□ -0.52
CD9-208ENST00000538834 CRABP1P29762 137 aa11.79□□□□□ -0.52
CD9-208ENST00000538834 KRTAP27-1Q3LI81 207 aa11.79□□□□□ -0.52
CD9-208ENST00000538834 GLB1L2Q8IW92 636 aa11.79□□□□□ -0.52
CD9-208ENST00000538834 SLC26A10Q8NG04 563 aa11.79□□□□□ -0.52
CD9-208ENST00000538834 OR10G2Q8NGC3 310 aa11.79□□□□□ -0.52
CD9-208ENST00000538834 OR4Q3Q8NH05 313 aa11.79□□□□□ -0.52
CD9-208ENST00000538834 GIPC3Q8TF64 312 aa11.79□□□□□ -0.52
CD9-208ENST00000538834 NRBF2Q96F24 287 aa11.79□□□□□ -0.52
CD9-208ENST00000538834 NMNAT3Q96T66 252 aa11.79□□□□□ -0.52
CD9-208ENST00000538834 RBM4Q9BWF3 364 aaKnown RBP11.79□□□□□ -0.52
CD9-208ENST00000538834 BARX1Q9HBU1 254 aaPredicted RBP11.79□□□□□ -0.52
CD9-208ENST00000538834 FBXO9Q9UK97 447 aaPredicted RBP11.79□□□□□ -0.52
CD9-208ENST00000538834 FN1P02751 2386 aaKnown RBP11.79□□□□□ -0.52
CD9-208ENST00000538834 NF1P21359 2839 aa11.78□□□□□ -0.52
CD9-208ENST00000538834 C12orf71A8MTZ7 269 aa11.78□□□□□ -0.52
CD9-208ENST00000538834 SYNGR3O43761 229 aa11.78□□□□□ -0.52
CD9-208ENST00000538834 MPZL1O95297 269 aa11.78□□□□□ -0.52
CD9-208ENST00000538834 STAMBPO95630 424 aa11.78□□□□□ -0.52
CD9-208ENST00000538834 F12P00748 615 aaPredicted RBP11.78□□□□□ -0.52
CD9-208ENST00000538834 TFP02787 698 aa11.78□□□□□ -0.52
CD9-208ENST00000538834 STOMP27105 288 aa11.78□□□□□ -0.52
CD9-208ENST00000538834 WNT5AP41221 380 aa11.78□□□□□ -0.52
CD9-208ENST00000538834 EFNA4P52798 201 aa11.78□□□□□ -0.52
CD9-208ENST00000538834 UCP2P55851 309 aa11.78□□□□□ -0.52
CD9-208ENST00000538834 PCBD1P61457 104 aa11.78□□□□□ -0.52
CD9-208ENST00000538834 CBX1P83916 185 aa11.78□□□□□ -0.52
CD9-208ENST00000538834 HSF2Q03933 536 aa11.78□□□□□ -0.52
CD9-208ENST00000538834 CCNIQ14094 377 aa11.78□□□□□ -0.52
CD9-208ENST00000538834 RSPO1Q2MKA7 263 aaPredicted RBP11.78□□□□□ -0.52
CD9-208ENST00000538834 TMEM255AQ5JRV8 349 aa11.78□□□□□ -0.52
CD9-208ENST00000538834 KRT80Q6KB66 452 aa11.78□□□□□ -0.52
CD9-208ENST00000538834 SPATA24Q86W54 205 aa11.78□□□□□ -0.52
CD9-208ENST00000538834 OR1J2Q8NGS2 313 aa11.78□□□□□ -0.52
CD9-208ENST00000538834 OR4K13Q8NH42 304 aa11.78□□□□□ -0.52
CD9-208ENST00000538834 AKR7LQ8NHP1 331 aa11.78□□□□□ -0.52
CD9-208ENST00000538834 ZNRF4Q8WWF5 429 aa11.78□□□□□ -0.52
CD9-208ENST00000538834 C11orf40Q8WZ69 217 aa11.78□□□□□ -0.52
CD9-208ENST00000538834 C18orf12Q96KH6 178 aa11.78□□□□□ -0.52
CD9-208ENST00000538834 SORCS2Q96PQ0 1159 aa11.78□□□□□ -0.52
CD9-208ENST00000538834 BDH2Q9BUT1 245 aa11.78□□□□□ -0.52
CD9-208ENST00000538834 IFT27Q9BW83 186 aa11.78□□□□□ -0.52
CD9-208ENST00000538834 MRPL37Q9BZE1 423 aaKnown RBP11.78□□□□□ -0.52
CD9-208ENST00000538834 RNF121Q9H920 327 aa11.78□□□□□ -0.52
CD9-208ENST00000538834 EMC7Q9NPA0 242 aa11.78□□□□□ -0.52
CD9-208ENST00000538834 ATPIF1Q9UII2 106 aa11.78□□□□□ -0.52
CD9-208ENST00000538834 BAIAP2Q9UQB8 552 aa11.78□□□□□ -0.52
CD9-208ENST00000538834 CMAHPQ9Y471 501 aa11.78□□□□□ -0.52
CD9-208ENST00000538834 LHFPL6Q9Y693 200 aa11.78□□□□□ -0.52
CD9-208ENST00000538834 PMF1-BGLAPU3KQ54 211 aa11.78□□□□□ -0.52
CD9-208ENST00000538834 C2CD3Q4AC94 2353 aa11.78□□□□□ -0.52
CD9-208ENST00000538834 DYSFO75923 2080 aa11.77□□□□□ -0.52
CD9-208ENST00000538834 IQCMA0A1B0GVH7 501 aa11.77□□□□□ -0.53
CD9-208ENST00000538834 A0A1W2PPL8 197 aa11.77□□□□□ -0.53
CD9-208ENST00000538834 OR6C6A6NF89 314 aa11.77□□□□□ -0.53
CD9-208ENST00000538834 VWC2LB2RUY7 222 aa11.77□□□□□ -0.53
CD9-208ENST00000538834 CCL2P13500 99 aa11.77□□□□□ -0.53
CD9-208ENST00000538834 GGT2P36268 569 aa11.77□□□□□ -0.53
CD9-208ENST00000538834 PLP2Q04941 152 aa11.77□□□□□ -0.53
CD9-208ENST00000538834 KRTAP1-1Q07627 177 aa11.77□□□□□ -0.53
CD9-208ENST00000538834 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.77□□□□□ -0.53
CD9-208ENST00000538834 DBPQ10586 325 aaPredicted RBP11.77□□□□□ -0.53
CD9-208ENST00000538834 TNK1Q13470 666 aa11.77□□□□□ -0.53
CD9-208ENST00000538834 AQP6Q13520 282 aa11.77□□□□□ -0.53
CD9-208ENST00000538834 PCK2Q16822 640 aa11.77□□□□□ -0.53
CD9-208ENST00000538834 CLEC12BQ2HXU8 276 aa11.77□□□□□ -0.53
CD9-208ENST00000538834 TBC1D28Q2M2D7 210 aa11.77□□□□□ -0.53
CD9-208ENST00000538834 CCDC92Q53HC0 331 aaPredicted RBP11.77□□□□□ -0.53
CD9-208ENST00000538834 ZNF774Q6NX45 483 aa11.77□□□□□ -0.53
CD9-208ENST00000538834 FAHD1Q6P587 224 aa11.77□□□□□ -0.53
CD9-208ENST00000538834 LEG1Q6P5S2 330 aa11.77□□□□□ -0.53
CD9-208ENST00000538834 VASH1Q7L8A9 365 aaPredicted RBP11.77□□□□□ -0.53
CD9-208ENST00000538834 LRP11Q86VZ4 500 aa11.77□□□□□ -0.53
CD9-208ENST00000538834 ZNF101Q8IZC7 436 aa11.77□□□□□ -0.53
CD9-208ENST00000538834 HS3ST5Q8IZT8 346 aa11.77□□□□□ -0.53
CD9-208ENST00000538834 BCL2L14Q9BZR8 327 aa11.77□□□□□ -0.53
CD9-208ENST00000538834 KCNN2Q9H2S1 579 aa11.77□□□□□ -0.53
CD9-208ENST00000538834 YY1AP1Q9H869 796 aa11.77□□□□□ -0.53
CD9-208ENST00000538834 CCNB1IP1Q9NPC3 277 aa11.77□□□□□ -0.53
CD9-208ENST00000538834 MRPL22Q9NWU5 206 aaKnown RBP11.77□□□□□ -0.53
CD9-208ENST00000538834 MYEF2Q9P2K5 600 aaKnown RBP11.77□□□□□ -0.53
CD9-208ENST00000538834 SPEF1Q9Y4P9 236 aa11.77□□□□□ -0.53
CD9-208ENST00000538834 TRIM64A6NGJ6 449 aa11.76□□□□□ -0.53
CD9-208ENST00000538834 TRIM64BA6NI03 449 aa11.76□□□□□ -0.53
CD9-208ENST00000538834 GPANK1O95872 356 aa11.76□□□□□ -0.53
CD9-208ENST00000538834 BMP4P12644 408 aa11.76□□□□□ -0.53
CD9-208ENST00000538834 ANXA8P13928 327 aa11.76□□□□□ -0.53
CD9-208ENST00000538834 RAD52P43351 418 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms