RNA–Protein interactions for RNA: ENST00000537529.6

MKS1-204, Transcript of Meckel syndrome, type 1, humanhuman

TSL 1 (best) BASIC

Gene MKS1, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-204ENST00000537529 ZNF275Q9NSD4 429 aaPredicted RBP13.99□□□□□ -0.17
MKS1-204ENST00000537529 CDV3Q9UKY7 258 aaKnown RBP13.99□□□□□ -0.17
MKS1-204ENST00000537529 ASCC3Q8N3C0 2202 aaKnown RBP13.99□□□□□ -0.17
MKS1-204ENST00000537529 A0A0A6YYJ9 748 aa13.99□□□□□ -0.17
MKS1-204ENST00000537529 A0A1W2PNR3 127 aa13.99□□□□□ -0.17
MKS1-204ENST00000537529 NAP1L6A6NFF2 107 aa13.99□□□□□ -0.17
MKS1-204ENST00000537529 H0YC42 278 aa13.99□□□□□ -0.17
MKS1-204ENST00000537529 ACOT7O00154 380 aa13.99□□□□□ -0.17
MKS1-204ENST00000537529 RGS13O14921 159 aa13.99□□□□□ -0.17
MKS1-204ENST00000537529 RAD1O60671 282 aa13.99□□□□□ -0.17
MKS1-204ENST00000537529 IGHG1P01857 330 aa13.99□□□□□ -0.17
MKS1-204ENST00000537529 H2BFMP0C1H6 154 aa13.99□□□□□ -0.17
MKS1-204ENST00000537529 GSTT2BP0CG30 244 aa13.99□□□□□ -0.17
MKS1-204ENST00000537529 FSTP19883 344 aa13.99□□□□□ -0.17
MKS1-204ENST00000537529 CSRP1P21291 193 aaKnown RBP13.99□□□□□ -0.17
MKS1-204ENST00000537529 RAG2P55895 527 aa13.99□□□□□ -0.17
MKS1-204ENST00000537529 C19orf57Q0VDD7 668 aa13.99□□□□□ -0.17
MKS1-204ENST00000537529 TMEM225Q6GV28 225 aa13.99□□□□□ -0.17
MKS1-204ENST00000537529 NHLRC1Q6VVB1 395 aa13.99□□□□□ -0.17
MKS1-204ENST00000537529 ZNF704Q6ZNC4 412 aaPredicted RBP13.99□□□□□ -0.17
MKS1-204ENST00000537529 UTS2BQ765I0 119 aa13.99□□□□□ -0.17
MKS1-204ENST00000537529 BTN2A1Q7KYR7 527 aa13.99□□□□□ -0.17
MKS1-204ENST00000537529 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.99□□□□□ -0.17
MKS1-204ENST00000537529 C11orf40Q8WZ69 217 aa13.99□□□□□ -0.17
MKS1-204ENST00000537529 PPP1R14AQ96A00 147 aa13.99□□□□□ -0.17
MKS1-204ENST00000537529 SCMH1Q96GD3 660 aa13.99□□□□□ -0.17
MKS1-204ENST00000537529 MRPL13Q9BYD1 178 aaKnown RBP13.99□□□□□ -0.17
MKS1-204ENST00000537529 OR52A1Q9UKL2 312 aa13.99□□□□□ -0.17
MKS1-204ENST00000537529 FBXL3Q9UKT7 428 aa13.99□□□□□ -0.17
MKS1-204ENST00000537529 HHLA2Q9UM44 414 aa13.99□□□□□ -0.17
MKS1-204ENST00000537529 NSG1A0A0A6YYJ2 146 aa13.98□□□□□ -0.17
MKS1-204ENST00000537529 TEX51A0A1B0GUA7 166 aa13.98□□□□□ -0.17
MKS1-204ENST00000537529 SLC17A2O00624 439 aa13.98□□□□□ -0.17
MKS1-204ENST00000537529 IGHEP01854 428 aa13.98□□□□□ -0.17
MKS1-204ENST00000537529 OPN1LWP04000 364 aa13.98□□□□□ -0.17
MKS1-204ENST00000537529 ACP1P24666 158 aa13.98□□□□□ -0.17
MKS1-204ENST00000537529 P2RY4P51582 365 aa13.98□□□□□ -0.17
MKS1-204ENST00000537529 MAB21L1Q13394 359 aa13.98□□□□□ -0.17
MKS1-204ENST00000537529 OR13C3Q8NGS6 347 aa13.98□□□□□ -0.17
MKS1-204ENST00000537529 RNF133Q8WVZ7 376 aa13.98□□□□□ -0.17
MKS1-204ENST00000537529 ASB5Q8WWX0 329 aa13.98□□□□□ -0.17
MKS1-204ENST00000537529 OXGR1Q96P68 337 aa13.98□□□□□ -0.17
MKS1-204ENST00000537529 ACTR6Q9GZN1 396 aa13.98□□□□□ -0.17
MKS1-204ENST00000537529 MED28Q9H204 178 aa13.98□□□□□ -0.17
MKS1-204ENST00000537529 RCE1Q9Y256 329 aa13.98□□□□□ -0.17
MKS1-204ENST00000537529 LOC107986453A0A1B0GWG9 222 aa13.97□□□□□ -0.17
MKS1-204ENST00000537529 TRAF3IP2O43734 574 aaPredicted RBP13.97□□□□□ -0.17
MKS1-204ENST00000537529 GLSO94925 669 aaPredicted RBP13.97□□□□□ -0.17
MKS1-204ENST00000537529 ISG15P05161 165 aa13.97□□□□□ -0.17
MKS1-204ENST00000537529 H2AFB2P0C5Z0 115 aa13.97□□□□□ -0.17
MKS1-204ENST00000537529 LAP3P28838 519 aa13.97□□□□□ -0.17
MKS1-204ENST00000537529 SFTPDP35247 375 aa13.97□□□□□ -0.17
MKS1-204ENST00000537529 DNASE1L1P49184 302 aa13.97□□□□□ -0.17
MKS1-204ENST00000537529 CCR6P51684 374 aa13.97□□□□□ -0.17
MKS1-204ENST00000537529 SLC35A1P78382 337 aa13.97□□□□□ -0.17
MKS1-204ENST00000537529 FOXK1P85037 733 aa13.97□□□□□ -0.17
MKS1-204ENST00000537529 CDK10Q15131 360 aa13.97□□□□□ -0.17
MKS1-204ENST00000537529 ZNF239Q16600 458 aaKnown RBP13.97□□□□□ -0.17
MKS1-204ENST00000537529 TMEM176BQ3YBM2 270 aaPredicted RBP13.97□□□□□ -0.17
MKS1-204ENST00000537529 GLT8D1Q68CQ7 371 aa13.97□□□□□ -0.17
MKS1-204ENST00000537529 GPAT4Q86UL3 456 aa13.97□□□□□ -0.17
MKS1-204ENST00000537529 LIX1LQ8IVB5 337 aa13.97□□□□□ -0.17
MKS1-204ENST00000537529 GTPBP8Q8N3Z3 284 aaPredicted RBP13.97□□□□□ -0.17
MKS1-204ENST00000537529 DTWD2Q8NBA8 298 aa13.97□□□□□ -0.17
MKS1-204ENST00000537529 OR11G2Q8NGC1 345 aa13.97□□□□□ -0.17
MKS1-204ENST00000537529 GCDHQ92947 438 aaPredicted RBP13.97□□□□□ -0.17
MKS1-204ENST00000537529 SLC25A44Q96H78 314 aaPredicted RBP13.97□□□□□ -0.17
MKS1-204ENST00000537529 OR2M2Q96R28 347 aa13.97□□□□□ -0.17
MKS1-204ENST00000537529 ANGPTL4Q9BY76 406 aa13.97□□□□□ -0.17
MKS1-204ENST00000537529 NIPAL2Q9H841 368 aa13.97□□□□□ -0.17
MKS1-204ENST00000537529 G6PC2Q9NQR9 355 aa13.97□□□□□ -0.17
MKS1-204ENST00000537529 CENPMQ9NSP4 180 aa13.97□□□□□ -0.17
MKS1-204ENST00000537529 TMEM269A0A1B0GVZ9 245 aa13.97□□□□□ -0.17
MKS1-204ENST00000537529 A0A1W2PPL8 197 aa13.97□□□□□ -0.17
MKS1-204ENST00000537529 A0A1W2PQ72 361 aa13.97□□□□□ -0.17
MKS1-204ENST00000537529 XRCC3O43542 346 aa13.97□□□□□ -0.17
MKS1-204ENST00000537529 CD63P08962 238 aa13.97□□□□□ -0.17
MKS1-204ENST00000537529 UBCP0CG48 685 aaKnown RBP13.97□□□□□ -0.17
MKS1-204ENST00000537529 PGA4P0DJD7 388 aa13.97□□□□□ -0.17
MKS1-204ENST00000537529 PGA3P0DJD8 388 aa13.97□□□□□ -0.17
MKS1-204ENST00000537529 STOMP27105 288 aa13.97□□□□□ -0.17
MKS1-204ENST00000537529 ERP29P30040 261 aaKnown RBP13.97□□□□□ -0.17
MKS1-204ENST00000537529 RPS15P62841 145 aaKnown RBP13.97□□□□□ -0.17
MKS1-204ENST00000537529 SF3B4Q15427 424 aaKnown RBP eCLIP13.97□□□□□ -0.172e-6■■■■■ 32.5
MKS1-204ENST00000537529 LPAL2Q16609 132 aa13.97□□□□□ -0.17
MKS1-204ENST00000537529 TMEM244Q5VVB8 128 aa13.97□□□□□ -0.17
MKS1-204ENST00000537529 LRFN4Q6PJG9 635 aa13.97□□□□□ -0.17
MKS1-204ENST00000537529 KLHL24Q6TFL4 600 aa13.97□□□□□ -0.17
MKS1-204ENST00000537529 CDH24Q86UP0 819 aa13.97□□□□□ -0.17
MKS1-204ENST00000537529 OR6X1Q8NH79 312 aa13.97□□□□□ -0.17
MKS1-204ENST00000537529 ITFG2Q969R8 447 aa13.97□□□□□ -0.17
MKS1-204ENST00000537529 TRAF4Q9BUZ4 470 aaPredicted RBP13.97□□□□□ -0.17
MKS1-204ENST00000537529 GHITMQ9H3K2 345 aa13.97□□□□□ -0.17
MKS1-204ENST00000537529 SMOC1Q9H4F8 434 aa13.97□□□□□ -0.17
MKS1-204ENST00000537529 CDCP1Q9H5V8 836 aa13.97□□□□□ -0.17
MKS1-204ENST00000537529 ZNF160Q9HCG1 818 aa13.97□□□□□ -0.17
MKS1-204ENST00000537529 HRASLSQ9HDD0 168 aa13.97□□□□□ -0.17
MKS1-204ENST00000537529 SLC17A5Q9NRA2 495 aa13.97□□□□□ -0.17
MKS1-204ENST00000537529 TAS2R4Q9NYW5 299 aa13.97□□□□□ -0.17
MKS1-204ENST00000537529 LOC100289279A0A1B0GTE1 492 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms