RNA–Protein interactions for RNA: ENST00000535236.5

SFSWAP-203, Transcript of splicing factor SWAP, humanhuman

TSL 1 (best)

Gene SFSWAP, Length 5,593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-203ENST00000535236 ARRDC1-AS1Q9H2J1 176 aa16.62■□□□□ 0.25
SFSWAP-203ENST00000535236 PCYT1BQ9Y5K3 369 aaPredicted RBP16.62■□□□□ 0.25
SFSWAP-203ENST00000535236 ABCD4O14678 606 aa16.62■□□□□ 0.25
SFSWAP-203ENST00000535236 HLA-HP01893 362 aa16.62■□□□□ 0.25
SFSWAP-203ENST00000535236 TCRBP04435 133 aa16.62■□□□□ 0.25
SFSWAP-203ENST00000535236 TFAP2EQ6VUC0 442 aa16.62■□□□□ 0.25
SFSWAP-203ENST00000535236 C1orf87Q8N0U7 546 aa16.62■□□□□ 0.25
SFSWAP-203ENST00000535236 OR2L13Q8N349 312 aa16.62■□□□□ 0.25
SFSWAP-203ENST00000535236 EXD3Q8N9H8 876 aa16.62■□□□□ 0.25
SFSWAP-203ENST00000535236 OR51F2Q8NH61 342 aa16.62■□□□□ 0.25
SFSWAP-203ENST00000535236 KCNE4Q8WWG9 221 aa16.62■□□□□ 0.25
SFSWAP-203ENST00000535236 CTXN2P0C2S0 81 aa16.61■□□□□ 0.25
SFSWAP-203ENST00000535236 DHRS4L2Q6PKH6 230 aa16.61■□□□□ 0.25
SFSWAP-203ENST00000535236 DEFB108BQ8NET1 73 aa16.61■□□□□ 0.25
SFSWAP-203ENST00000535236 RNF141Q8WVD5 230 aa16.61■□□□□ 0.25
SFSWAP-203ENST00000535236 SDF2Q99470 211 aa16.61■□□□□ 0.25
SFSWAP-203ENST00000535236 IER2Q9BTL4 223 aa16.61■□□□□ 0.25
SFSWAP-203ENST00000535236 H0YIG0 161 aa16.61■□□□□ 0.25
SFSWAP-203ENST00000535236 DSCR3O14972 297 aa16.61■□□□□ 0.25
SFSWAP-203ENST00000535236 FOSL1P15407 271 aa16.61■□□□□ 0.25
SFSWAP-203ENST00000535236 APEX1P27695 318 aaKnown RBP16.61■□□□□ 0.25
SFSWAP-203ENST00000535236 ETFBKMTQ8IXQ9 262 aa16.61■□□□□ 0.25
SFSWAP-203ENST00000535236 ZNF784Q8NCA9 323 aaPredicted RBP16.61■□□□□ 0.25
SFSWAP-203ENST00000535236 LAT2Q9GZY6 243 aa16.61■□□□□ 0.25
SFSWAP-203ENST00000535236 OR52A5Q9H2C5 316 aa16.61■□□□□ 0.25
SFSWAP-203ENST00000535236 LGI1O95970 557 aa16.61■□□□□ 0.25
SFSWAP-203ENST00000535236 CSN1S1P47710 185 aa16.61■□□□□ 0.25
SFSWAP-203ENST00000535236 MRPL19P49406 292 aaKnown RBP16.61■□□□□ 0.25
SFSWAP-203ENST00000535236 SKA3Q8IX90 412 aa16.61■□□□□ 0.25
SFSWAP-203ENST00000535236 SLAMF6Q96DU3 332 aa16.61■□□□□ 0.25
SFSWAP-203ENST00000535236 ADAM19Q9H013 955 aa16.61■□□□□ 0.25
SFSWAP-203ENST00000535236 R3HDMLQ9H3Y0 253 aa16.61■□□□□ 0.25
SFSWAP-203ENST00000535236 A0A1W2PNR3 127 aa16.61■□□□□ 0.25
SFSWAP-203ENST00000535236 A0A1W2PR48 441 aa16.61■□□□□ 0.25
SFSWAP-203ENST00000535236 FGF17O60258 216 aa16.61■□□□□ 0.25
SFSWAP-203ENST00000535236 TLE1Q04724 770 aa16.61■□□□□ 0.25
SFSWAP-203ENST00000535236 DUSP2Q05923 314 aa16.61■□□□□ 0.25
SFSWAP-203ENST00000535236 OR51E1Q8TCB6 317 aa16.61■□□□□ 0.25
SFSWAP-203ENST00000535236 EDEM2Q9BV94 578 aa16.61■□□□□ 0.25
SFSWAP-203ENST00000535236 EXOSC3Q9NQT5 275 aaKnown RBP16.61■□□□□ 0.25
SFSWAP-203ENST00000535236 THBS1P07996 1170 aa16.6■□□□□ 0.25
SFSWAP-203ENST00000535236 GLRA1P23415 457 aa16.6■□□□□ 0.25
SFSWAP-203ENST00000535236 OR6K3Q8NGY3 331 aa16.6■□□□□ 0.25
SFSWAP-203ENST00000535236 TAS2R4Q9NYW5 299 aa16.6■□□□□ 0.25
SFSWAP-203ENST00000535236 MYH10P35580 1976 aa16.6■□□□□ 0.25
SFSWAP-203ENST00000535236 C5orf49A4QMS7 147 aa16.6■□□□□ 0.25
SFSWAP-203ENST00000535236 M6PRP20645 277 aa16.6■□□□□ 0.25
SFSWAP-203ENST00000535236 SLC19A1P41440 591 aa16.6■□□□□ 0.25
SFSWAP-203ENST00000535236 SNRPGP62308 76 aaKnown RBP16.6■□□□□ 0.25
SFSWAP-203ENST00000535236 MPPED2Q15777 294 aa16.6■□□□□ 0.25
SFSWAP-203ENST00000535236 OR10K1Q8NGX5 313 aa16.6■□□□□ 0.25
SFSWAP-203ENST00000535236 SLC25A21Q9BQT8 299 aaPredicted RBP16.6■□□□□ 0.25
SFSWAP-203ENST00000535236 C20orf85Q9H1P6 137 aa16.6■□□□□ 0.25
SFSWAP-203ENST00000535236 MTCH1Q9NZJ7 389 aa16.6■□□□□ 0.25
SFSWAP-203ENST00000535236 LOC107986453A0A1B0GWG9 222 aa16.6■□□□□ 0.25
SFSWAP-203ENST00000535236 AIPO00170 330 aa16.6■□□□□ 0.25
SFSWAP-203ENST00000535236 ST6GAL1P15907 406 aa16.6■□□□□ 0.25
SFSWAP-203ENST00000535236 LAP3P28838 519 aa16.6■□□□□ 0.25
SFSWAP-203ENST00000535236 PPICP45877 212 aa16.6■□□□□ 0.25
SFSWAP-203ENST00000535236 CAPZBP47756 277 aa16.6■□□□□ 0.25
SFSWAP-203ENST00000535236 HTR4Q13639 388 aa16.6■□□□□ 0.25
SFSWAP-203ENST00000535236 SNTB1Q13884 538 aaKnown RBP16.6■□□□□ 0.25
SFSWAP-203ENST00000535236 TMEM81Q6P7N7 255 aa16.6■□□□□ 0.25
SFSWAP-203ENST00000535236 PTRH1Q86Y79 214 aaKnown RBP16.6■□□□□ 0.25
SFSWAP-203ENST00000535236 MBOAT4Q96T53 435 aa16.6■□□□□ 0.25
SFSWAP-203ENST00000535236 OR11A1Q9GZK7 315 aa16.6■□□□□ 0.25
SFSWAP-203ENST00000535236 MOB1AQ9H8S9 216 aa16.6■□□□□ 0.25
SFSWAP-203ENST00000535236 SIRPB1O00241 398 aa16.6■□□□□ 0.25
SFSWAP-203ENST00000535236 SOHLH1Q5JUK2 328 aa16.6■□□□□ 0.25
SFSWAP-203ENST00000535236 THEM4Q5T1C6 240 aa16.6■□□□□ 0.25
SFSWAP-203ENST00000535236 RBM45Q8IUH3 476 aaKnown RBP16.6■□□□□ 0.25
SFSWAP-203ENST00000535236 SEH1LQ96EE3 360 aa16.6■□□□□ 0.25
SFSWAP-203ENST00000535236 ASH2LQ9UBL3 628 aa16.6■□□□□ 0.25
SFSWAP-203ENST00000535236 OSGIN2Q9Y236 505 aa16.6■□□□□ 0.25
SFSWAP-203ENST00000535236 PIPP12273 146 aaPredicted RBP16.59■□□□□ 0.25
SFSWAP-203ENST00000535236 FLI1Q01543 452 aaPredicted RBP16.59■□□□□ 0.25
SFSWAP-203ENST00000535236 BAGE3Q86Y29 109 aa16.59■□□□□ 0.25
SFSWAP-203ENST00000535236 BAGE2Q86Y30 109 aa16.59■□□□□ 0.25
SFSWAP-203ENST00000535236 OR1M1Q8NGA1 313 aa16.59■□□□□ 0.25
SFSWAP-203ENST00000535236 TEAD3Q99594 435 aa16.59■□□□□ 0.25
SFSWAP-203ENST00000535236 HPNP05981 417 aa16.59■□□□□ 0.25
SFSWAP-203ENST00000535236 CCDC74BQ96LY2 380 aa16.59■□□□□ 0.25
SFSWAP-203ENST00000535236 POFUT1Q9H488 388 aa16.59■□□□□ 0.25
SFSWAP-203ENST00000535236 FAM96BQ9Y3D0 163 aa16.59■□□□□ 0.25
SFSWAP-203ENST00000535236 GPR12P47775 334 aa16.59■□□□□ 0.25
SFSWAP-203ENST00000535236 EMP3P54852 163 aa16.59■□□□□ 0.25
SFSWAP-203ENST00000535236 UBE2G1P62253 170 aa16.59■□□□□ 0.25
SFSWAP-203ENST00000535236 CLN3Q13286 438 aa16.59■□□□□ 0.25
SFSWAP-203ENST00000535236 NHSL2Q5HYW2 709 aa16.59■□□□□ 0.25
SFSWAP-203ENST00000535236 CA13Q8N1Q1 262 aa16.59■□□□□ 0.25
SFSWAP-203ENST00000535236 PDCD1LG2Q9BQ51 273 aa16.59■□□□□ 0.25
SFSWAP-203ENST00000535236 TUBB1Q9H4B7 451 aa16.59■□□□□ 0.25
SFSWAP-203ENST00000535236 ACOXLQ9NUZ1 547 aa16.59■□□□□ 0.25
SFSWAP-203ENST00000535236 A0A096LPE4 126 aa16.59■□□□□ 0.25
SFSWAP-203ENST00000535236 A0A1W2PPZ6 126 aa16.59■□□□□ 0.25
SFSWAP-203ENST00000535236 ICOSLGO75144 302 aa16.59■□□□□ 0.25
SFSWAP-203ENST00000535236 CCR6P51684 374 aa16.59■□□□□ 0.25
SFSWAP-203ENST00000535236 RTL8BQ17RB0 113 aa16.59■□□□□ 0.25
SFSWAP-203ENST00000535236 EMC4Q5J8M3 183 aa16.59■□□□□ 0.25
SFSWAP-203ENST00000535236 ANKRD16Q6P6B7 361 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms