RNA–Protein interactions for RNA: ENST00000532877.1

COL16A1-217, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 534 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-217ENST00000532877 RPS27P42677 84 aaKnown RBP12.53□□□□□ -0.4
COL16A1-217ENST00000532877 ENTPD1P49961 510 aa12.53□□□□□ -0.4
COL16A1-217ENST00000532877 ASCL1P50553 236 aa12.53□□□□□ -0.4
COL16A1-217ENST00000532877 CHN2P52757 468 aa12.53□□□□□ -0.4
COL16A1-217ENST00000532877 TGFBR3Q03167 851 aa12.53□□□□□ -0.4
COL16A1-217ENST00000532877 RAB40BQ12829 278 aa12.53□□□□□ -0.4
COL16A1-217ENST00000532877 ENDOGQ14249 297 aaKnown RBP12.53□□□□□ -0.4
COL16A1-217ENST00000532877 TSC22D1Q15714 1073 aa12.53□□□□□ -0.4
COL16A1-217ENST00000532877 ANKRD16Q6P6B7 361 aa12.53□□□□□ -0.4
COL16A1-217ENST00000532877 STAC2Q6ZMT1 411 aa12.53□□□□□ -0.4
COL16A1-217ENST00000532877 AHSA2Q719I0 299 aa12.53□□□□□ -0.4
COL16A1-217ENST00000532877 SLC16A9Q7RTY1 509 aa12.53□□□□□ -0.4
COL16A1-217ENST00000532877 ZNF540Q8NDQ6 660 aa12.53□□□□□ -0.4
COL16A1-217ENST00000532877 C1orf162Q8NEQ5 155 aaPredicted RBP12.53□□□□□ -0.4
COL16A1-217ENST00000532877 OR10H5Q8NGA6 315 aa12.53□□□□□ -0.4
COL16A1-217ENST00000532877 OR4F15Q8NGB8 312 aa12.53□□□□□ -0.4
COL16A1-217ENST00000532877 OR52I1Q8NGK6 324 aa12.53□□□□□ -0.4
COL16A1-217ENST00000532877 OR6N2Q8NGY6 317 aa12.53□□□□□ -0.4
COL16A1-217ENST00000532877 LILRB4Q8NHJ6 448 aa12.53□□□□□ -0.4
COL16A1-217ENST00000532877 SMAP2Q8WU79 429 aaPredicted RBP12.53□□□□□ -0.4
COL16A1-217ENST00000532877 GGHQ92820 318 aa12.53□□□□□ -0.4
COL16A1-217ENST00000532877 BCL2L2Q92843 193 aaPredicted RBP12.53□□□□□ -0.4
COL16A1-217ENST00000532877 ZNF416Q9BWM5 594 aa12.53□□□□□ -0.4
COL16A1-217ENST00000532877 FKBP14Q9NWM8 211 aa12.53□□□□□ -0.4
COL16A1-217ENST00000532877 PAK1IP1Q9NWT1 392 aaPredicted RBP12.53□□□□□ -0.4
COL16A1-217ENST00000532877 GALNT8Q9NY28 637 aa12.53□□□□□ -0.4
COL16A1-217ENST00000532877 SCN3BQ9NY72 215 aa12.53□□□□□ -0.4
COL16A1-217ENST00000532877 CNOT2Q9NZN8 540 aaKnown RBP12.53□□□□□ -0.4
COL16A1-217ENST00000532877 BLOC1S6Q9UL45 172 aa12.53□□□□□ -0.4
COL16A1-217ENST00000532877 EXOGQ9Y2C4 368 aaKnown RBP12.53□□□□□ -0.4
COL16A1-217ENST00000532877 POLR1DQ9Y2S0 133 aa12.53□□□□□ -0.4
COL16A1-217ENST00000532877 CACNA1CQ13936 2221 aa12.53□□□□□ -0.4
COL16A1-217ENST00000532877 HIVEP1P15822 2718 aa12.52□□□□□ -0.41
COL16A1-217ENST00000532877 A0A096LPE4 126 aa12.52□□□□□ -0.41
COL16A1-217ENST00000532877 A0A1W2PPZ6 126 aa12.52□□□□□ -0.41
COL16A1-217ENST00000532877 CIB4A0PJX0 185 aa12.52□□□□□ -0.41
COL16A1-217ENST00000532877 FARS2O95363 451 aaKnown RBP12.52□□□□□ -0.41
COL16A1-217ENST00000532877 SPARCP09486 303 aa12.52□□□□□ -0.41
COL16A1-217ENST00000532877 OR8G3PP0DMU2 310 aa12.52□□□□□ -0.41
COL16A1-217ENST00000532877 ZNF823P16415 610 aa12.52□□□□□ -0.41
COL16A1-217ENST00000532877 PSMB1P20618 241 aaKnown RBP12.52□□□□□ -0.41
COL16A1-217ENST00000532877 CCKARP32238 428 aa12.52□□□□□ -0.41
COL16A1-217ENST00000532877 ATP6V1E1P36543 226 aa12.52□□□□□ -0.41
COL16A1-217ENST00000532877 CD79BP40259 229 aa12.52□□□□□ -0.41
COL16A1-217ENST00000532877 LSM6P62312 80 aaKnown RBP12.52□□□□□ -0.41
COL16A1-217ENST00000532877 SLC35A2P78381 396 aa12.52□□□□□ -0.41
COL16A1-217ENST00000532877 CDSNQ15517 529 aa12.52□□□□□ -0.41
COL16A1-217ENST00000532877 GABRA6Q16445 453 aa12.52□□□□□ -0.41
COL16A1-217ENST00000532877 PCK2Q16822 640 aa12.52□□□□□ -0.41
COL16A1-217ENST00000532877 HIKESHIQ53FT3 197 aa12.52□□□□□ -0.41
COL16A1-217ENST00000532877 KLHL22Q53GT1 634 aa12.52□□□□□ -0.41
COL16A1-217ENST00000532877 SFRP5Q5T4F7 317 aa12.52□□□□□ -0.41
COL16A1-217ENST00000532877 FAM27BQ5VT28 67 aa12.52□□□□□ -0.41
COL16A1-217ENST00000532877 BHLHA15Q7RTS1 189 aaPredicted RBP12.52□□□□□ -0.41
COL16A1-217ENST00000532877 DPY19L4Q7Z388 723 aa12.52□□□□□ -0.41
COL16A1-217ENST00000532877 SLC35F2Q8IXU6 374 aa12.52□□□□□ -0.41
COL16A1-217ENST00000532877 LRRC18Q8N456 261 aa12.52□□□□□ -0.41
COL16A1-217ENST00000532877 CA5BP1Q8WTZ4 195 aa12.52□□□□□ -0.41
COL16A1-217ENST00000532877 ITLN2Q8WWU7 325 aaPredicted RBP12.52□□□□□ -0.41
COL16A1-217ENST00000532877 SGCDQ92629 289 aa12.52□□□□□ -0.41
COL16A1-217ENST00000532877 SH3GL3Q99963 347 aa12.52□□□□□ -0.41
COL16A1-217ENST00000532877 YTHDF1Q9BYJ9 559 aaKnown RBP12.52□□□□□ -0.41
COL16A1-217ENST00000532877 ELOVL5Q9NYP7 299 aa12.52□□□□□ -0.41
COL16A1-217ENST00000532877 KCNG2Q9UJ96 466 aa12.52□□□□□ -0.41
COL16A1-217ENST00000532877 TPRKBQ9Y3C4 175 aa12.52□□□□□ -0.41
COL16A1-217ENST00000532877 LHFPL6Q9Y693 200 aa12.52□□□□□ -0.41
COL16A1-217ENST00000532877 MED13LQ71F56 2210 aa12.52□□□□□ -0.41
COL16A1-217ENST00000532877 IRGMA1A4Y4 181 aa12.51□□□□□ -0.41
COL16A1-217ENST00000532877 A1L4Q6 167 aa12.51□□□□□ -0.41
COL16A1-217ENST00000532877 NKX2-6A6NCS4 301 aa12.51□□□□□ -0.41
COL16A1-217ENST00000532877 PTGES3LE9PB15 166 aa12.51□□□□□ -0.41
COL16A1-217ENST00000532877 J3QRE1 110 aa12.51□□□□□ -0.41
COL16A1-217ENST00000532877 ZNF593O00488 134 aaPredicted RBP12.51□□□□□ -0.41
COL16A1-217ENST00000532877 FADS2O95864 444 aaKnown RBP12.51□□□□□ -0.41
COL16A1-217ENST00000532877 IGHA1P01876 353 aa12.51□□□□□ -0.41
COL16A1-217ENST00000532877 ADRA2AP08913 450 aa12.51□□□□□ -0.41
COL16A1-217ENST00000532877 CST2P09228 141 aa12.51□□□□□ -0.41
COL16A1-217ENST00000532877 AGAP20933 346 aa12.51□□□□□ -0.41
COL16A1-217ENST00000532877 IL32P24001 234 aa12.51□□□□□ -0.41
COL16A1-217ENST00000532877 FAM27E3Q08E93 113 aa12.51□□□□□ -0.41
COL16A1-217ENST00000532877 ST3GAL4Q11206 333 aa12.51□□□□□ -0.41
COL16A1-217ENST00000532877 AQP6Q13520 282 aa12.51□□□□□ -0.41
COL16A1-217ENST00000532877 TBRG1Q3YBR2 411 aa12.51□□□□□ -0.41
COL16A1-217ENST00000532877 FBXL19-AS1Q494R0 122 aa12.51□□□□□ -0.41
COL16A1-217ENST00000532877 TEX30Q5JUR7 227 aa12.51□□□□□ -0.41
COL16A1-217ENST00000532877 OR7E24Q6IFN5 339 aa12.51□□□□□ -0.41
COL16A1-217ENST00000532877 SLC16A14Q7RTX9 510 aa12.51□□□□□ -0.41
COL16A1-217ENST00000532877 CDC20BQ86Y33 519 aa12.51□□□□□ -0.41
COL16A1-217ENST00000532877 LINC00346Q8IVM7 164 aa12.51□□□□□ -0.41
COL16A1-217ENST00000532877 SKA3Q8IX90 412 aa12.51□□□□□ -0.41
COL16A1-217ENST00000532877 RFLNBQ8N5W9 214 aa12.51□□□□□ -0.41
COL16A1-217ENST00000532877 OR10H4Q8NGA5 316 aa12.51□□□□□ -0.41
COL16A1-217ENST00000532877 OTOSQ8NHW6 89 aa12.51□□□□□ -0.41
COL16A1-217ENST00000532877 BOD1Q96IK1 185 aa12.51□□□□□ -0.41
COL16A1-217ENST00000532877 COPS4Q9BT78 406 aa12.51□□□□□ -0.41
COL16A1-217ENST00000532877 YIPF3Q9GZM5 350 aa12.51□□□□□ -0.41
COL16A1-217ENST00000532877 DUSP21Q9H596 190 aa12.51□□□□□ -0.41
COL16A1-217ENST00000532877 FGF20Q9NP95 211 aaPredicted RBP12.51□□□□□ -0.41
COL16A1-217ENST00000532877 ZNF224Q9NZL3 707 aa12.51□□□□□ -0.41
COL16A1-217ENST00000532877 ASH2LQ9UBL3 628 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms