RNA–Protein interactions for RNA: ENST00000531873.5

CD44-234, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 584 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-234ENST00000531873 SLC25A37Q9NYZ2 338 aa2.02□□□□□ -2.09
CD44-234ENST00000531873 ZNF225Q9UK10 706 aa2.02□□□□□ -2.09
CD44-234ENST00000531873 HEBP2Q9Y5Z4 205 aa2.02□□□□□ -2.09
CD44-234ENST00000531873 MRPS18BQ9Y676 258 aaKnown RBP2.02□□□□□ -2.09
CD44-234ENST00000531873 SMAD5-AS1Q9Y6J3 95 aa2.02□□□□□ -2.09
CD44-234ENST00000531873 TSPOAP1O95153 1857 aa2.02□□□□□ -2.09
CD44-234ENST00000531873 NOTCH2Q04721 2471 aa2.02□□□□□ -2.09
CD44-234ENST00000531873 COL22A1Q8NFW1 1626 aaPredicted RBP2.02□□□□□ -2.09
CD44-234ENST00000531873 NACAE9PAV3 2078 aa2.02□□□□□ -2.09
CD44-234ENST00000531873 DOCK9Q9BZ29 2069 aa2.02□□□□□ -2.09
CD44-234ENST00000531873 WDR62O43379 1518 aa2.01□□□□□ -2.09
CD44-234ENST00000531873 IGLV1-36A0A0B4J1U3 117 aa2.01□□□□□ -2.09
CD44-234ENST00000531873 PLAC8L1A1L4L8 177 aa2.01□□□□□ -2.09
CD44-234ENST00000531873 ERI2A8K979 691 aaKnown RBP2.01□□□□□ -2.09
CD44-234ENST00000531873 LYRM9A8MSI8 78 aa2.01□□□□□ -2.09
CD44-234ENST00000531873 H3BNH8 94 aa2.01□□□□□ -2.09
CD44-234ENST00000531873 RAD51CO43502 376 aa2.01□□□□□ -2.09
CD44-234ENST00000531873 FKBP6O75344 327 aa2.01□□□□□ -2.09
CD44-234ENST00000531873 SUPT3HO75486 399 aa2.01□□□□□ -2.09
CD44-234ENST00000531873 FLOT1O75955 427 aa2.01□□□□□ -2.09
CD44-234ENST00000531873 FGFR1OPO95684 399 aaKnown RBP2.01□□□□□ -2.09
CD44-234ENST00000531873 ARG1P05089 322 aa2.01□□□□□ -2.09
CD44-234ENST00000531873 PLEKP08567 350 aaPredicted RBP2.01□□□□□ -2.09
CD44-234ENST00000531873 CLTAP09496 248 aa2.01□□□□□ -2.09
CD44-234ENST00000531873 UBTFL6P0CB48 400 aaPredicted RBP2.01□□□□□ -2.09
CD44-234ENST00000531873 SMIM10L1P0DMW3 83 aa2.01□□□□□ -2.09
CD44-234ENST00000531873 HPGDP15428 266 aa2.01□□□□□ -2.09
CD44-234ENST00000531873 PRKACAP17612 351 aa2.01□□□□□ -2.09
CD44-234ENST00000531873 AK4P27144 223 aaPredicted RBP2.01□□□□□ -2.09
CD44-234ENST00000531873 MAS1LP35410 378 aa2.01□□□□□ -2.09
CD44-234ENST00000531873 BCAP31P51572 246 aa2.01□□□□□ -2.09
CD44-234ENST00000531873 ZNF138P52744 262 aa2.01□□□□□ -2.09
CD44-234ENST00000531873 SLC7A9P82251 487 aa2.01□□□□□ -2.09
CD44-234ENST00000531873 TWF1Q12792 350 aa2.01□□□□□ -2.09
CD44-234ENST00000531873 DNAJC3Q13217 504 aa2.01□□□□□ -2.09
CD44-234ENST00000531873 CLINT1Q14677 625 aa2.01□□□□□ -2.09
CD44-234ENST00000531873 NCF4Q15080 339 aa2.01□□□□□ -2.09
CD44-234ENST00000531873 PSMD5Q16401 504 aa2.01□□□□□ -2.09
CD44-234ENST00000531873 GABRA6Q16445 453 aa2.01□□□□□ -2.09
CD44-234ENST00000531873 ZSCAN26Q16670 478 aa2.01□□□□□ -2.09
CD44-234ENST00000531873 TRMT5Q32P41 509 aaKnown RBP2.01□□□□□ -2.09
CD44-234ENST00000531873 TTLL9Q3SXZ7 439 aa2.01□□□□□ -2.09
CD44-234ENST00000531873 ZBED5Q49AG3 693 aa2.01□□□□□ -2.09
CD44-234ENST00000531873 RSBN1Q5VWQ0 802 aaPredicted RBP2.01□□□□□ -2.09
CD44-234ENST00000531873 TMEM179Q6ZVK1 233 aa2.01□□□□□ -2.09
CD44-234ENST00000531873 PEX26Q7Z412 305 aa2.01□□□□□ -2.09
CD44-234ENST00000531873 TMEM150AQ86TG1 271 aa2.01□□□□□ -2.09
CD44-234ENST00000531873 CMTM8Q8IZV2 173 aa2.01□□□□□ -2.09
CD44-234ENST00000531873 FAM71E2Q8N5Q1 922 aa2.01□□□□□ -2.09
CD44-234ENST00000531873 OR10J6PQ8NGY7 276 aa2.01□□□□□ -2.09
CD44-234ENST00000531873 FAM3DQ96BQ1 224 aa2.01□□□□□ -2.09
CD44-234ENST00000531873 PHYHIPLQ96FC7 376 aa2.01□□□□□ -2.09
CD44-234ENST00000531873 SMIM10Q96HG1 83 aa2.01□□□□□ -2.09
CD44-234ENST00000531873 JSRP1Q96MG2 331 aaPredicted RBP2.01□□□□□ -2.09
CD44-234ENST00000531873 ZYG11BQ9C0D3 744 aa2.01□□□□□ -2.09
CD44-234ENST00000531873 IL22Q9GZX6 179 aa2.01□□□□□ -2.09
CD44-234ENST00000531873 SAMSN1Q9NSI8 373 aaKnown RBP2.01□□□□□ -2.09
CD44-234ENST00000531873 CLN6Q9NWW5 311 aa2.01□□□□□ -2.09
CD44-234ENST00000531873 ZNF629Q9UEG4 869 aaPredicted RBP2.01□□□□□ -2.09
CD44-234ENST00000531873 KCNE3Q9Y6H6 103 aa2.01□□□□□ -2.09
CD44-234ENST00000531873 ANKRD12Q6UB98 2062 aa2.01□□□□□ -2.09
CD44-234ENST00000531873 AK9Q5TCS8 1911 aa2.01□□□□□ -2.09
CD44-234ENST00000531873 KIF27Q86VH2 1401 aa2□□□□□ -2.09
CD44-234ENST00000531873 TNIKQ9UKE5 1360 aa2□□□□□ -2.09
CD44-234ENST00000531873 ZNF701M0R085 212 aaPredicted RBP2□□□□□ -2.09
CD44-234ENST00000531873 CD5LO43866 347 aa2□□□□□ -2.09
CD44-234ENST00000531873 SNAI1O95863 264 aaPredicted RBP2□□□□□ -2.09
CD44-234ENST00000531873 HBE1P02100 147 aa2□□□□□ -2.09
CD44-234ENST00000531873 BGLAPP02818 100 aa2□□□□□ -2.09
CD44-234ENST00000531873 GNAO1P09471 354 aa2□□□□□ -2.09
CD44-234ENST00000531873 OR5H8P0DN80 308 aa2□□□□□ -2.09
CD44-234ENST00000531873 MSR1P21757 451 aa2□□□□□ -2.09
CD44-234ENST00000531873 CFHR2P36980 270 aa2□□□□□ -2.09
CD44-234ENST00000531873 SLC26A3P40879 764 aa2□□□□□ -2.09
CD44-234ENST00000531873 TNFSF9P41273 254 aa2□□□□□ -2.09
CD44-234ENST00000531873 RSPO1Q2MKA7 263 aaPredicted RBP2□□□□□ -2.09
CD44-234ENST00000531873 TMEM255AQ5JRV8 349 aa2□□□□□ -2.09
CD44-234ENST00000531873 COA6Q5JTJ3 125 aaKnown RBP2□□□□□ -2.09
CD44-234ENST00000531873 UBE2UQ5VVX9 321 aa2□□□□□ -2.09
CD44-234ENST00000531873 ANKRD22Q5VYY1 191 aa2□□□□□ -2.09
CD44-234ENST00000531873 TEX43Q6ZNM6 134 aa2□□□□□ -2.09
CD44-234ENST00000531873 ZNF493Q6ZR52 646 aa2□□□□□ -2.09
CD44-234ENST00000531873 VTCN1Q7Z7D3 282 aa2□□□□□ -2.09
CD44-234ENST00000531873 CAMK2N1Q7Z7J9 78 aa2□□□□□ -2.09
CD44-234ENST00000531873 MREGQ8N565 214 aa2□□□□□ -2.09
CD44-234ENST00000531873 ACTRT1Q8TDG2 376 aa2□□□□□ -2.09
CD44-234ENST00000531873 TMEM158Q8WZ71 300 aa2□□□□□ -2.09
CD44-234ENST00000531873 NAT6Q93015 286 aa2□□□□□ -2.09
CD44-234ENST00000531873 EEF1AKMT3Q96AZ1 226 aa2□□□□□ -2.09
CD44-234ENST00000531873 RNF185Q96GF1 192 aa2□□□□□ -2.09
CD44-234ENST00000531873 TSSK3Q96PN8 268 aa2□□□□□ -2.09
CD44-234ENST00000531873 NRTNQ99748 197 aa2□□□□□ -2.09
CD44-234ENST00000531873 MYOZ2Q9NPC6 264 aa2□□□□□ -2.09
CD44-234ENST00000531873 DMAP1Q9NPF5 467 aaPredicted RBP2□□□□□ -2.09
CD44-234ENST00000531873 TMEM9BQ9NQ34 198 aa2□□□□□ -2.09
CD44-234ENST00000531873 ZNF226Q9NYT6 803 aa2□□□□□ -2.09
CD44-234ENST00000531873 DEC1Q9P2X7 70 aa2□□□□□ -2.09
CD44-234ENST00000531873 YARS2Q9Y2Z4 477 aaKnown RBP2□□□□□ -2.09
CD44-234ENST00000531873 NFASCO94856 1347 aa1.99□□□□□ -2.09
CD44-234ENST00000531873 CENPJQ9HC77 1338 aaPredicted RBP1.99□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms