RNA–Protein interactions for RNA: ENST00000529856.5

CCDC90B-216, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,039 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-216ENST00000529856 STOMP27105 288 aa10.94□□□□□ -0.66
CCDC90B-216ENST00000529856 APEX1P27695 318 aaKnown RBP10.94□□□□□ -0.66
CCDC90B-216ENST00000529856 GLRXP35754 106 aa10.94□□□□□ -0.66
CCDC90B-216ENST00000529856 LSM6P62312 80 aaKnown RBP10.94□□□□□ -0.66
CCDC90B-216ENST00000529856 GALK2Q01415 458 aa10.94□□□□□ -0.66
CCDC90B-216ENST00000529856 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.94□□□□□ -0.66
CCDC90B-216ENST00000529856 SNTB2Q13425 540 aaKnown RBP10.94□□□□□ -0.66
CCDC90B-216ENST00000529856 EFNB3Q15768 340 aa10.94□□□□□ -0.66
CCDC90B-216ENST00000529856 KCNMB1Q16558 191 aa10.94□□□□□ -0.66
CCDC90B-216ENST00000529856 TBC1D28Q2M2D7 210 aa10.94□□□□□ -0.66
CCDC90B-216ENST00000529856 ZNF362Q5T0B9 420 aaPredicted RBP10.94□□□□□ -0.66
CCDC90B-216ENST00000529856 DNM1P34Q6PK57 102 aa10.94□□□□□ -0.66
CCDC90B-216ENST00000529856 HS3ST5Q8IZT8 346 aa10.94□□□□□ -0.66
CCDC90B-216ENST00000529856 PAQR4Q8N4S7 273 aaPredicted RBP10.94□□□□□ -0.66
CCDC90B-216ENST00000529856 NPEPL1Q8NDH3 523 aa10.94□□□□□ -0.66
CCDC90B-216ENST00000529856 AKR7LQ8NHP1 331 aa10.94□□□□□ -0.66
CCDC90B-216ENST00000529856 NRBF2Q96F24 287 aa10.94□□□□□ -0.66
CCDC90B-216ENST00000529856 TMUB1Q9BVT8 246 aa10.94□□□□□ -0.66
CCDC90B-216ENST00000529856 OR2H1Q9GZK4 316 aa10.94□□□□□ -0.66
CCDC90B-216ENST00000529856 WNT5BQ9H1J7 359 aa10.94□□□□□ -0.66
CCDC90B-216ENST00000529856 REV1Q9UBZ9 1251 aa10.94□□□□□ -0.66
CCDC90B-216ENST00000529856 BAIAP2Q9UQB8 552 aa10.94□□□□□ -0.66
CCDC90B-216ENST00000529856 AP4S1Q9Y587 144 aa10.94□□□□□ -0.66
CCDC90B-216ENST00000529856 PMF1-BGLAPU3KQ54 211 aa10.94□□□□□ -0.66
CCDC90B-216ENST00000529856 VPS13CQ709C8 3753 aa10.93□□□□□ -0.66
CCDC90B-216ENST00000529856 ARFGEF3Q5TH69 2177 aa10.93□□□□□ -0.66
CCDC90B-216ENST00000529856 TMEM129A0AVI4 362 aa10.93□□□□□ -0.66
CCDC90B-216ENST00000529856 B9A039 149 aa10.93□□□□□ -0.66
CCDC90B-216ENST00000529856 H7C417 338 aa10.93□□□□□ -0.66
CCDC90B-216ENST00000529856 NDUFS7O75251 213 aa10.93□□□□□ -0.66
CCDC90B-216ENST00000529856 SNAP29O95721 258 aa10.93□□□□□ -0.66
CCDC90B-216ENST00000529856 CCL2P13500 99 aa10.93□□□□□ -0.66
CCDC90B-216ENST00000529856 ANXA8P13928 327 aa10.93□□□□□ -0.66
CCDC90B-216ENST00000529856 APLNRP35414 380 aa10.93□□□□□ -0.66
CCDC90B-216ENST00000529856 ARHGDIAP52565 204 aa10.93□□□□□ -0.66
CCDC90B-216ENST00000529856 SHQ1Q6PI26 577 aaKnown RBP10.93□□□□□ -0.66
CCDC90B-216ENST00000529856 ZBTB46Q86UZ6 589 aa10.93□□□□□ -0.66
CCDC90B-216ENST00000529856 ALDH16A1Q8IZ83 802 aa10.93□□□□□ -0.66
CCDC90B-216ENST00000529856 SDR9C7Q8NEX9 313 aa10.93□□□□□ -0.66
CCDC90B-216ENST00000529856 OR2T33Q8NG76 320 aa10.93□□□□□ -0.66
CCDC90B-216ENST00000529856 OR4Q3Q8NH05 313 aa10.93□□□□□ -0.66
CCDC90B-216ENST00000529856 C11orf40Q8WZ69 217 aa10.93□□□□□ -0.66
CCDC90B-216ENST00000529856 POM121L2Q96KW2 1035 aa10.93□□□□□ -0.66
CCDC90B-216ENST00000529856 RACGAP1Q9H0H5 632 aa10.93□□□□□ -0.66
CCDC90B-216ENST00000529856 PLK3Q9H4B4 646 aa10.93□□□□□ -0.66
CCDC90B-216ENST00000529856 CDH20Q9HBT6 801 aa10.93□□□□□ -0.66
CCDC90B-216ENST00000529856 RPRD1BQ9NQG5 326 aaKnown RBP10.93□□□□□ -0.66
CCDC90B-216ENST00000529856 GDF2Q9UK05 429 aaPredicted RBP10.93□□□□□ -0.66
CCDC90B-216ENST00000529856 CMAHPQ9Y471 501 aa10.93□□□□□ -0.66
CCDC90B-216ENST00000529856 FKBP7Q9Y680 259 aa10.93□□□□□ -0.66
CCDC90B-216ENST00000529856 MED13LQ71F56 2210 aa10.92□□□□□ -0.66
CCDC90B-216ENST00000529856 LOC100509620A0A075B734 347 aa10.92□□□□□ -0.66
CCDC90B-216ENST00000529856 GPRIN2O60269 458 aa10.92□□□□□ -0.66
CCDC90B-216ENST00000529856 GPANK1O95872 356 aa10.92□□□□□ -0.66
CCDC90B-216ENST00000529856 IGHV4-39P01824 125 aa10.92□□□□□ -0.66
CCDC90B-216ENST00000529856 GAAP10253 952 aa10.92□□□□□ -0.66
CCDC90B-216ENST00000529856 CD99P14209 185 aa10.92□□□□□ -0.66
CCDC90B-216ENST00000529856 PCSK6P29122 969 aa10.92□□□□□ -0.66
CCDC90B-216ENST00000529856 CENPAP49450 140 aa10.92□□□□□ -0.66
CCDC90B-216ENST00000529856 EVX1P49640 407 aa10.92□□□□□ -0.66
CCDC90B-216ENST00000529856 GDI2P50395 445 aaKnown RBP10.92□□□□□ -0.66
CCDC90B-216ENST00000529856 SNRPD2P62316 118 aaKnown RBP10.92□□□□□ -0.66
CCDC90B-216ENST00000529856 SCRN3Q0VDG4 424 aa10.92□□□□□ -0.66
CCDC90B-216ENST00000529856 DBPQ10586 325 aaPredicted RBP10.92□□□□□ -0.66
CCDC90B-216ENST00000529856 AQP6Q13520 282 aa10.92□□□□□ -0.66
CCDC90B-216ENST00000529856 RAB35Q15286 201 aa10.92□□□□□ -0.66
CCDC90B-216ENST00000529856 ATP6AP1Q15904 470 aa10.92□□□□□ -0.66
CCDC90B-216ENST00000529856 MSMPQ1L6U9 139 aa10.92□□□□□ -0.66
CCDC90B-216ENST00000529856 SLC36A3Q495N2 470 aa10.92□□□□□ -0.66
CCDC90B-216ENST00000529856 OTPQ5XKR4 325 aa10.92□□□□□ -0.66
CCDC90B-216ENST00000529856 ZNF774Q6NX45 483 aa10.92□□□□□ -0.66
CCDC90B-216ENST00000529856 SLC37A3Q8NCC5 494 aa10.92□□□□□ -0.66
CCDC90B-216ENST00000529856 Q96MF0 132 aa10.92□□□□□ -0.66
CCDC90B-216ENST00000529856 DOK1Q99704 481 aa10.92□□□□□ -0.66
CCDC90B-216ENST00000529856 FN3KQ9H479 309 aa10.92□□□□□ -0.66
CCDC90B-216ENST00000529856 ZNF556Q9HAH1 456 aa10.92□□□□□ -0.66
CCDC90B-216ENST00000529856 BARX1Q9HBU1 254 aaPredicted RBP10.92□□□□□ -0.66
CCDC90B-216ENST00000529856 KLHL21Q9UJP4 597 aa10.92□□□□□ -0.66
CCDC90B-216ENST00000529856 F8P00451 2351 aa10.91□□□□□ -0.66
CCDC90B-216ENST00000529856 C5orf49A4QMS7 147 aa10.91□□□□□ -0.66
CCDC90B-216ENST00000529856 FAM171A2A8MVW0 826 aa10.91□□□□□ -0.66
CCDC90B-216ENST00000529856 H3BN98 237 aa10.91□□□□□ -0.66
CCDC90B-216ENST00000529856 TFP02787 698 aa10.91□□□□□ -0.66
CCDC90B-216ENST00000529856 FAM157BP0CG42 384 aa10.91□□□□□ -0.66
CCDC90B-216ENST00000529856 COX5BP10606 129 aa10.91□□□□□ -0.66
CCDC90B-216ENST00000529856 OSMP13725 252 aa10.91□□□□□ -0.66
CCDC90B-216ENST00000529856 CCNOP22674 350 aa10.91□□□□□ -0.66
CCDC90B-216ENST00000529856 FASP25445 335 aa10.91□□□□□ -0.66
CCDC90B-216ENST00000529856 RAD52P43351 418 aa10.91□□□□□ -0.66
CCDC90B-216ENST00000529856 UCP2P55851 309 aa10.91□□□□□ -0.66
CCDC90B-216ENST00000529856 ACTR3P61158 418 aa10.91□□□□□ -0.66
CCDC90B-216ENST00000529856 RPS23P62266 143 aaKnown RBP10.91□□□□□ -0.66
CCDC90B-216ENST00000529856 GLO1Q04760 184 aa10.91□□□□□ -0.66
CCDC90B-216ENST00000529856 FAHD1Q6P587 224 aa10.91□□□□□ -0.66
CCDC90B-216ENST00000529856 SVOPLQ8N434 492 aa10.91□□□□□ -0.66
CCDC90B-216ENST00000529856 ATG16L2Q8NAA4 619 aa10.91□□□□□ -0.66
CCDC90B-216ENST00000529856 CYB561A3Q8NBI2 242 aa10.91□□□□□ -0.66
CCDC90B-216ENST00000529856 SLC26A10Q8NG04 563 aa10.91□□□□□ -0.66
CCDC90B-216ENST00000529856 OR5K1Q8NHB7 308 aa10.91□□□□□ -0.66
CCDC90B-216ENST00000529856 TEX47Q8TBZ9 253 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms