RNA–Protein interactions for RNA: ENST00000528280.1

CHD7-208, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-208ENST00000528280 C5orf49A4QMS7 147 aa8.24□□□□□ -1.09
CHD7-208ENST00000528280 UNC119BA6NIH7 251 aa8.24□□□□□ -1.09
CHD7-208ENST00000528280 CDC42EP2O14613 210 aa8.24□□□□□ -1.09
CHD7-208ENST00000528280 IDH3BO43837 385 aa8.24□□□□□ -1.09
CHD7-208ENST00000528280 LMX1BO60663 402 aa8.24□□□□□ -1.09
CHD7-208ENST00000528280 KHDRBS3O75525 346 aaKnown RBP8.24□□□□□ -1.09
CHD7-208ENST00000528280 IGHV3-13P01766 116 aa8.24□□□□□ -1.09
CHD7-208ENST00000528280 FABP3P05413 133 aa8.24□□□□□ -1.09
CHD7-208ENST00000528280 TACSTD2P09758 323 aa8.24□□□□□ -1.09
CHD7-208ENST00000528280 FAM157BP0CG42 384 aa8.24□□□□□ -1.09
CHD7-208ENST00000528280 IGHV4-31P0DP07 118 aa8.24□□□□□ -1.09
CHD7-208ENST00000528280 TCN1P20061 433 aaPredicted RBP8.24□□□□□ -1.09
CHD7-208ENST00000528280 HNF1AP20823 631 aa8.24□□□□□ -1.09
CHD7-208ENST00000528280 PCMT1P22061 227 aa8.24□□□□□ -1.09
CHD7-208ENST00000528280 ACHEP22303 614 aa8.24□□□□□ -1.09
CHD7-208ENST00000528280 APEX1P27695 318 aaKnown RBP8.24□□□□□ -1.09
CHD7-208ENST00000528280 LAP3P28838 519 aa8.24□□□□□ -1.09
CHD7-208ENST00000528280 CRABP1P29762 137 aa8.24□□□□□ -1.09
CHD7-208ENST00000528280 THBS2P35442 1172 aa8.24□□□□□ -1.09
CHD7-208ENST00000528280 GPR4P46093 362 aa8.24□□□□□ -1.09
CHD7-208ENST00000528280 OMPP47874 163 aa8.24□□□□□ -1.09
CHD7-208ENST00000528280 LSM6P62312 80 aaKnown RBP8.24□□□□□ -1.09
CHD7-208ENST00000528280 PSG4Q00888 419 aa8.24□□□□□ -1.09
CHD7-208ENST00000528280 SCRN3Q0VDG4 424 aa8.24□□□□□ -1.09
CHD7-208ENST00000528280 FHL1Q13642 323 aa8.24□□□□□ -1.09
CHD7-208ENST00000528280 MTX3Q5HYI7 312 aa8.24□□□□□ -1.09
CHD7-208ENST00000528280 PGM2L1Q6PCE3 622 aa8.24□□□□□ -1.09
CHD7-208ENST00000528280 DNM1P34Q6PK57 102 aa8.24□□□□□ -1.09
CHD7-208ENST00000528280 SMARCD3Q6STE5 483 aa8.24□□□□□ -1.09
CHD7-208ENST00000528280 IGFN1Q86VF2 1251 aa8.24□□□□□ -1.09
CHD7-208ENST00000528280 ZCCHC24Q8N2G6 241 aaKnown RBP8.24□□□□□ -1.09
CHD7-208ENST00000528280 RNF148Q8N7C7 305 aa8.24□□□□□ -1.09
CHD7-208ENST00000528280 OR1J1Q8NGS3 322 aa8.24□□□□□ -1.09
CHD7-208ENST00000528280 NABP1Q96AH0 204 aa8.24□□□□□ -1.09
CHD7-208ENST00000528280 FAM46AQ96IP4 442 aaKnown RBP8.24□□□□□ -1.09
CHD7-208ENST00000528280 NSL1Q96IY1 281 aa8.24□□□□□ -1.09
CHD7-208ENST00000528280 POM121L2Q96KW2 1035 aa8.24□□□□□ -1.09
CHD7-208ENST00000528280 DHRS1Q96LJ7 313 aa8.24□□□□□ -1.09
CHD7-208ENST00000528280 DIRC2Q96SL1 478 aa8.24□□□□□ -1.09
CHD7-208ENST00000528280 GPX7Q96SL4 187 aaPredicted RBP8.24□□□□□ -1.09
CHD7-208ENST00000528280 OR2H1Q9GZK4 316 aa8.24□□□□□ -1.09
CHD7-208ENST00000528280 SHARPINQ9H0F6 387 aa8.24□□□□□ -1.09
CHD7-208ENST00000528280 MUC13Q9H3R2 512 aa8.24□□□□□ -1.09
CHD7-208ENST00000528280 DECR2Q9NUI1 292 aa8.24□□□□□ -1.09
CHD7-208ENST00000528280 TAAR3PQ9P1P4 343 aa8.24□□□□□ -1.09
CHD7-208ENST00000528280 KCNS2Q9ULS6 477 aa8.24□□□□□ -1.09
CHD7-208ENST00000528280 SIGLEC7Q9Y286 467 aa8.24□□□□□ -1.09
CHD7-208ENST00000528280 CUBNO60494 3623 aa8.24□□□□□ -1.09
CHD7-208ENST00000528280 ABCA1O95477 2261 aa8.23□□□□□ -1.09
CHD7-208ENST00000528280 TEX13CA0A0J9YWL9 993 aa8.23□□□□□ -1.09
CHD7-208ENST00000528280 C17orf100A8MU93 164 aa8.23□□□□□ -1.09
CHD7-208ENST00000528280 B2RBV5 119 aa8.23□□□□□ -1.09
CHD7-208ENST00000528280 ICMTO60725 284 aa8.23□□□□□ -1.09
CHD7-208ENST00000528280 TXNDC12O95881 172 aa8.23□□□□□ -1.09
CHD7-208ENST00000528280 FAM157CP0CG43 387 aa8.23□□□□□ -1.09
CHD7-208ENST00000528280 CCL2P13500 99 aa8.23□□□□□ -1.09
CHD7-208ENST00000528280 ANPEPP15144 967 aa8.23□□□□□ -1.09
CHD7-208ENST00000528280 HOXB6P17509 224 aaKnown RBP8.23□□□□□ -1.09
CHD7-208ENST00000528280 RRM2P31350 389 aa8.23□□□□□ -1.09
CHD7-208ENST00000528280 SLC6A6P31641 620 aa8.23□□□□□ -1.09
CHD7-208ENST00000528280 ALDH3B1P43353 468 aa8.23□□□□□ -1.09
CHD7-208ENST00000528280 LIMS1P48059 325 aa8.23□□□□□ -1.09
CHD7-208ENST00000528280 HMGA2P52926 109 aa8.23□□□□□ -1.09
CHD7-208ENST00000528280 FMODQ06828 376 aa8.23□□□□□ -1.09
CHD7-208ENST00000528280 RIPK1Q13546 671 aa8.23□□□□□ -1.09
CHD7-208ENST00000528280 RIN1Q13671 783 aa8.23□□□□□ -1.09
CHD7-208ENST00000528280 RFX4Q33E94 735 aa8.23□□□□□ -1.09
CHD7-208ENST00000528280 ZMAT1Q5H9K5 638 aa8.23□□□□□ -1.09
CHD7-208ENST00000528280 MBNL2Q5VZF2 373 aaKnown RBP8.23□□□□□ -1.09
CHD7-208ENST00000528280 RPL13AP3Q6NVV1 102 aa8.23□□□□□ -1.09
CHD7-208ENST00000528280 FAM122BQ7Z309 247 aa8.23□□□□□ -1.09
CHD7-208ENST00000528280 TSEN54Q7Z6J9 526 aaKnown RBP8.23□□□□□ -1.09
CHD7-208ENST00000528280 LRP11Q86VZ4 500 aa8.23□□□□□ -1.09
CHD7-208ENST00000528280 GLB1L2Q8IW92 636 aa8.23□□□□□ -1.09
CHD7-208ENST00000528280 DEFB107AQ8IZN7 70 aa8.23□□□□□ -1.09
CHD7-208ENST00000528280 OR52J3Q8NH60 311 aa8.23□□□□□ -1.09
CHD7-208ENST00000528280 GNPDA2Q8TDQ7 276 aa8.23□□□□□ -1.09
CHD7-208ENST00000528280 RSRC1Q96IZ7 334 aaKnown RBP8.23□□□□□ -1.09
CHD7-208ENST00000528280 C4orf45Q96LM5 186 aa8.23□□□□□ -1.09
CHD7-208ENST00000528280 Q96M85 177 aa8.23□□□□□ -1.09
CHD7-208ENST00000528280 SNX18Q96RF0 628 aa8.23□□□□□ -1.09
CHD7-208ENST00000528280 BPESC1Q9GZL8 116 aa8.23□□□□□ -1.09
CHD7-208ENST00000528280 EGLN1Q9GZT9 426 aa8.23□□□□□ -1.09
CHD7-208ENST00000528280 TPK1Q9H3S4 243 aa8.23□□□□□ -1.09
CHD7-208ENST00000528280 POLE4Q9NR33 117 aa8.23□□□□□ -1.09
CHD7-208ENST00000528280 ARL8BQ9NVJ2 186 aa8.23□□□□□ -1.09
CHD7-208ENST00000528280 TBCCD1Q9NVR7 557 aa8.23□□□□□ -1.09
CHD7-208ENST00000528280 VSX1Q9NZR4 365 aaPredicted RBP8.23□□□□□ -1.09
CHD7-208ENST00000528280 ACTR3BQ9P1U1 418 aa8.23□□□□□ -1.09
CHD7-208ENST00000528280 ZDHHC8Q9ULC8 765 aa8.23□□□□□ -1.09
CHD7-208ENST00000528280 IER3IP1Q9Y5U9 82 aa8.23□□□□□ -1.09
CHD7-208ENST00000528280 CR1P17927 2039 aa8.22□□□□□ -1.09
CHD7-208ENST00000528280 LOC100509620A0A075B734 347 aa8.22□□□□□ -1.09
CHD7-208ENST00000528280 IGKV1D-43A0A0B4J1Z2 117 aa8.22□□□□□ -1.09
CHD7-208ENST00000528280 IGHV4-61A0A0C4DH41 118 aa8.22□□□□□ -1.09
CHD7-208ENST00000528280 TRBV4-1A0A0J9YWV2 114 aa8.22□□□□□ -1.09
CHD7-208ENST00000528280 J3QW42 95 aa8.22□□□□□ -1.09
CHD7-208ENST00000528280 ARPC2O15144 300 aa8.22□□□□□ -1.09
CHD7-208ENST00000528280 ARPC3O15145 178 aa8.22□□□□□ -1.09
CHD7-208ENST00000528280 TPD52L2O43399 206 aaKnown RBP8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms