RNA–Protein interactions for RNA: ENST00000524922.1

CD44-212, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-212ENST00000524922 GIN1Q9NXP7 522 aa1.2□□□□□ -2.22
CD44-212ENST00000524922 EMC3Q9P0I2 261 aa1.2□□□□□ -2.22
CD44-212ENST00000524922 PDP1Q9P0J1 537 aaPredicted RBP1.2□□□□□ -2.22
CD44-212ENST00000524922 TRIM10Q9UDY6 481 aa1.2□□□□□ -2.22
CD44-212ENST00000524922 TAC3Q9UHF0 121 aa1.2□□□□□ -2.22
CD44-212ENST00000524922 OPN4Q9UHM6 478 aa1.2□□□□□ -2.22
CD44-212ENST00000524922 ZNF639Q9UID6 485 aa1.2□□□□□ -2.22
CD44-212ENST00000524922 PHF11Q9UIL8 331 aa1.2□□□□□ -2.22
CD44-212ENST00000524922 MRTO4Q9UKD2 239 aaKnown RBP1.2□□□□□ -2.22
CD44-212ENST00000524922 STUB1Q9UNE7 303 aa1.2□□□□□ -2.22
CD44-212ENST00000524922 SLC25A15Q9Y619 301 aa1.2□□□□□ -2.22
CD44-212ENST00000524922 ARL5AQ9Y689 179 aa1.2□□□□□ -2.22
CD44-212ENST00000524922 U3KQK5 164 aa1.2□□□□□ -2.22
CD44-212ENST00000524922 APOBP04114 4563 aaKnown RBP1.2□□□□□ -2.22
CD44-212ENST00000524922 HEATR5BQ9P2D3 2071 aa1.2□□□□□ -2.22
CD44-212ENST00000524922 FAT2Q9NYQ8 4349 aa1.2□□□□□ -2.22
CD44-212ENST00000524922 ARFGEF3Q5TH69 2177 aa1.2□□□□□ -2.22
CD44-212ENST00000524922 SRRM2Q9UQ35 2752 aaKnown RBP1.19□□□□□ -2.22
CD44-212ENST00000524922 EML6Q6ZMW3 1958 aa1.19□□□□□ -2.22
CD44-212ENST00000524922 SNRNP200O75643 2136 aaKnown RBP1.19□□□□□ -2.22
CD44-212ENST00000524922 LRP1BQ9NZR2 4599 aa1.19□□□□□ -2.22
CD44-212ENST00000524922 NCKAP5O14513 1909 aa1.19□□□□□ -2.22
CD44-212ENST00000524922 FAT4Q6V0I7 4981 aa1.19□□□□□ -2.22
CD44-212ENST00000524922 DNAH6Q9C0G6 4158 aa1.19□□□□□ -2.22
CD44-212ENST00000524922 IGLV3-9A0A075B6K5 115 aa1.19□□□□□ -2.22
CD44-212ENST00000524922 IGHV3-38A0A0C4DH36 116 aa1.19□□□□□ -2.22
CD44-212ENST00000524922 IQANK1A0A1B0GTG1 560 aa1.19□□□□□ -2.22
CD44-212ENST00000524922 MAGEB16A2A368 324 aa1.19□□□□□ -2.22
CD44-212ENST00000524922 CCT8L1PA6NM43 557 aa1.19□□□□□ -2.22
CD44-212ENST00000524922 WASHC1A8K0Z3 465 aa1.19□□□□□ -2.22
CD44-212ENST00000524922 F5H0A9 414 aaPredicted RBP1.19□□□□□ -2.22
CD44-212ENST00000524922 RPL36A-HNRNPH2H7BZ11 118 aa1.19□□□□□ -2.22
CD44-212ENST00000524922 K7EQD1 137 aa1.19□□□□□ -2.22
CD44-212ENST00000524922 KCNK1O00180 336 aa1.19□□□□□ -2.22
CD44-212ENST00000524922 WWP2O00308 870 aa1.19□□□□□ -2.22
CD44-212ENST00000524922 FBP2O00757 339 aa1.19□□□□□ -2.22
CD44-212ENST00000524922 CLOCKO15516 846 aa1.19□□□□□ -2.22
CD44-212ENST00000524922 RAD51CO43502 376 aa1.19□□□□□ -2.22
CD44-212ENST00000524922 ANGPTL7O43827 346 aa1.19□□□□□ -2.22
CD44-212ENST00000524922 PLOD3O60568 738 aa1.19□□□□□ -2.22
CD44-212ENST00000524922 CYTIPO60759 359 aa1.19□□□□□ -2.22
CD44-212ENST00000524922 ICOSLGO75144 302 aa1.19□□□□□ -2.22
CD44-212ENST00000524922 RP2O75695 350 aa1.19□□□□□ -2.22
CD44-212ENST00000524922 TRAPPC6AO75865 159 aa1.19□□□□□ -2.22
CD44-212ENST00000524922 KRT33AO76009 404 aa1.19□□□□□ -2.22
CD44-212ENST00000524922 VAMP5O95183 116 aa1.19□□□□□ -2.22
CD44-212ENST00000524922 PSMG1O95456 288 aa1.19□□□□□ -2.22
CD44-212ENST00000524922 SYNGR4O95473 234 aa1.19□□□□□ -2.22
CD44-212ENST00000524922 GPR75O95800 540 aa1.19□□□□□ -2.22
CD44-212ENST00000524922 IGHV2-5P01817 119 aa1.19□□□□□ -2.22
CD44-212ENST00000524922 CLPSP04118 112 aa1.19□□□□□ -2.22
CD44-212ENST00000524922 THY1P04216 161 aa1.19□□□□□ -2.22
CD44-212ENST00000524922 ALDOBP05062 364 aa1.19□□□□□ -2.22
CD44-212ENST00000524922 CD55P08174 381 aa1.19□□□□□ -2.22
CD44-212ENST00000524922 HIST1H2AGP0C0S8 130 aaPredicted RBP1.19□□□□□ -2.22
CD44-212ENST00000524922 OR2T7P0C7T2 308 aa1.19□□□□□ -2.22
CD44-212ENST00000524922 TSPAN8P19075 237 aa1.19□□□□□ -2.22
CD44-212ENST00000524922 PAICSP22234 425 aaKnown RBP1.19□□□□□ -2.22
CD44-212ENST00000524922 GPX3P22352 226 aa1.19□□□□□ -2.22
CD44-212ENST00000524922 ME2P23368 584 aa1.19□□□□□ -2.22
CD44-212ENST00000524922 ZBTB25P24278 435 aa1.19□□□□□ -2.22
CD44-212ENST00000524922 KDELR1P24390 212 aa1.19□□□□□ -2.22
CD44-212ENST00000524922 CTNNA2P26232 953 aa1.19□□□□□ -2.22
CD44-212ENST00000524922 DPP4P27487 766 aa1.19□□□□□ -2.22
CD44-212ENST00000524922 CASP1P29466 404 aa1.19□□□□□ -2.22
CD44-212ENST00000524922 PBLDP30039 288 aaPredicted RBP1.19□□□□□ -2.22
CD44-212ENST00000524922 STIP1P31948 543 aaKnown RBP1.19□□□□□ -2.22
CD44-212ENST00000524922 ARR3P36575 388 aa1.19□□□□□ -2.22
CD44-212ENST00000524922 TGFBR2P37173 567 aa1.19□□□□□ -2.22
CD44-212ENST00000524922 FDFT1P37268 417 aa1.19□□□□□ -2.22
CD44-212ENST00000524922 CDKN2BP42772 138 aa1.19□□□□□ -2.22
CD44-212ENST00000524922 CRYBB2P43320 205 aa1.19□□□□□ -2.22
CD44-212ENST00000524922 KIR3DL2P43630 455 aa1.19□□□□□ -2.22
CD44-212ENST00000524922 KIR2DS4P43632 304 aa1.19□□□□□ -2.22
CD44-212ENST00000524922 GPR6P46095 362 aaPredicted RBP1.19□□□□□ -2.22
CD44-212ENST00000524922 RGS4P49798 205 aa1.19□□□□□ -2.22
CD44-212ENST00000524922 NPY4RP50391 375 aa1.19□□□□□ -2.22
CD44-212ENST00000524922 FABP6P51161 128 aa1.19□□□□□ -2.22
CD44-212ENST00000524922 CLDN15P56746 228 aa1.19□□□□□ -2.22
CD44-212ENST00000524922 SIRPAP78324 504 aa1.19□□□□□ -2.22
CD44-212ENST00000524922 SLC35A2P78381 396 aa1.19□□□□□ -2.22
CD44-212ENST00000524922 TNFRSF17Q02223 184 aa1.19□□□□□ -2.22
CD44-212ENST00000524922 ZNF763Q0D2J5 394 aa1.19□□□□□ -2.22
CD44-212ENST00000524922 BST1Q10588 318 aa1.19□□□□□ -2.22
CD44-212ENST00000524922 ASPHQ12797 758 aa1.19□□□□□ -2.22
CD44-212ENST00000524922 IFT88Q13099 833 aa1.19□□□□□ -2.22
CD44-212ENST00000524922 BAMBIQ13145 260 aa1.19□□□□□ -2.22
CD44-212ENST00000524922 CUL3Q13618 768 aa1.19□□□□□ -2.22
CD44-212ENST00000524922 ODF4Q2M2E3 257 aa1.19□□□□□ -2.22
CD44-212ENST00000524922 IQCCQ4KMZ1 466 aa1.19□□□□□ -2.22
CD44-212ENST00000524922 FBXO48Q5FWF7 155 aa1.19□□□□□ -2.22
CD44-212ENST00000524922 ARMCX4Q5H9R4 360 aa1.19□□□□□ -2.22
CD44-212ENST00000524922 PAGE2BQ5JRK9 111 aa1.19□□□□□ -2.22
CD44-212ENST00000524922 ELFN2Q5R3F8 820 aa1.19□□□□□ -2.22
CD44-212ENST00000524922 MFSD4BQ5TF39 518 aa1.19□□□□□ -2.22
CD44-212ENST00000524922 LCN1P1Q5VSP4 162 aa1.19□□□□□ -2.22
CD44-212ENST00000524922 OR52E8Q6IFG1 317 aa1.19□□□□□ -2.22
CD44-212ENST00000524922 KRTAP5-7Q6L8G8 165 aa1.19□□□□□ -2.22
CD44-212ENST00000524922 ANGPTL8Q6UXH0 198 aa1.19□□□□□ -2.22
CD44-212ENST00000524922 TMIGD1Q6UXZ0 262 aa1.19□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms