RNA–Protein interactions for RNA: ENST00000522353.2

PCDHA3-201, Transcript of protocadherin alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA3, Length 5,260 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-201ENST00000522353 M0R296 226 aa14.82□□□□□ -0.04
PCDHA3-201ENST00000522353 ABCD4O14678 606 aa14.82□□□□□ -0.04
PCDHA3-201ENST00000522353 TFAP2AP05549 437 aa14.82□□□□□ -0.04
PCDHA3-201ENST00000522353 GUSBP08236 651 aa14.82□□□□□ -0.04
PCDHA3-201ENST00000522353 BCKDHBP21953 392 aa14.82□□□□□ -0.04
PCDHA3-201ENST00000522353 TRIP6Q15654 476 aaKnown RBP14.82□□□□□ -0.04
PCDHA3-201ENST00000522353 ZNF707Q96C28 371 aaPredicted RBP14.82□□□□□ -0.04
PCDHA3-201ENST00000522353 PLEKHF2Q9H8W4 249 aa14.82□□□□□ -0.04
PCDHA3-201ENST00000522353 KCNIP2Q9NS61 270 aa14.82□□□□□ -0.04
PCDHA3-201ENST00000522353 UFSP2Q9NUQ7 469 aa14.82□□□□□ -0.04
PCDHA3-201ENST00000522353 QPCTLQ9NXS2 382 aa14.82□□□□□ -0.04
PCDHA3-201ENST00000522353 OSGIN1Q9UJX0 560 aa14.82□□□□□ -0.04
PCDHA3-201ENST00000522353 UPK1AO00322 258 aa14.82□□□□□ -0.04
PCDHA3-201ENST00000522353 GLAP06280 429 aa14.82□□□□□ -0.04
PCDHA3-201ENST00000522353 SBK2P0C263 348 aa14.82□□□□□ -0.04
PCDHA3-201ENST00000522353 CTXN2P0C2S0 81 aa14.82□□□□□ -0.04
PCDHA3-201ENST00000522353 ZNF26P17031 533 aaPredicted RBP14.82□□□□□ -0.04
PCDHA3-201ENST00000522353 LAP3P28838 519 aa14.82□□□□□ -0.04
PCDHA3-201ENST00000522353 TMEM81Q6P7N7 255 aa14.82□□□□□ -0.04
PCDHA3-201ENST00000522353 DLEU7Q6UYE1 221 aa14.82□□□□□ -0.04
PCDHA3-201ENST00000522353 CPNE4Q96A23 557 aaPredicted RBP14.82□□□□□ -0.04
PCDHA3-201ENST00000522353 NUDT9Q9BW91 350 aa14.82□□□□□ -0.04
PCDHA3-201ENST00000522353 JAM3Q9BX67 310 aa14.82□□□□□ -0.04
PCDHA3-201ENST00000522353 SIAEQ9HAT2 523 aa14.82□□□□□ -0.04
PCDHA3-201ENST00000522353 P4HTMQ9NXG6 502 aa14.82□□□□□ -0.04
PCDHA3-201ENST00000522353 SCN7AQ01118 1682 aa14.82□□□□□ -0.04
PCDHA3-201ENST00000522353 K7EPK0 472 aa14.81□□□□□ -0.04
PCDHA3-201ENST00000522353 KHDC1LQ5JSQ8 128 aa14.81□□□□□ -0.04
PCDHA3-201ENST00000522353 FAM71E2Q8N5Q1 922 aa14.81□□□□□ -0.04
PCDHA3-201ENST00000522353 FRZBQ92765 325 aa14.81□□□□□ -0.04
PCDHA3-201ENST00000522353 PLA2G2FQ9BZM2 168 aa14.81□□□□□ -0.04
PCDHA3-201ENST00000522353 NECAP2Q9NVZ3 263 aa14.81□□□□□ -0.04
PCDHA3-201ENST00000522353 TNFSF12-TNFSF13A0A0A6YY99 330 aa14.81□□□□□ -0.04
PCDHA3-201ENST00000522353 A0A1B0GVG6 124 aa14.81□□□□□ -0.04
PCDHA3-201ENST00000522353 TNFSF12O43508 249 aa14.81□□□□□ -0.04
PCDHA3-201ENST00000522353 FABP1P07148 127 aa14.81□□□□□ -0.04
PCDHA3-201ENST00000522353 POU2F2P09086 479 aa14.81□□□□□ -0.04
PCDHA3-201ENST00000522353 MYF5P13349 255 aa14.81□□□□□ -0.04
PCDHA3-201ENST00000522353 OR1C1Q15619 314 aa14.81□□□□□ -0.04
PCDHA3-201ENST00000522353 KDM4DQ6B0I6 523 aa14.81□□□□□ -0.04
PCDHA3-201ENST00000522353 LSRQ86X29 649 aaPredicted RBP14.81□□□□□ -0.04
PCDHA3-201ENST00000522353 RBM45Q8IUH3 476 aaKnown RBP14.81□□□□□ -0.04
PCDHA3-201ENST00000522353 DTWD2Q8NBA8 298 aa14.81□□□□□ -0.04
PCDHA3-201ENST00000522353 TP53I13Q8NBR0 393 aaPredicted RBP14.81□□□□□ -0.04
PCDHA3-201ENST00000522353 FAM234AQ9H0X4 552 aa14.81□□□□□ -0.04
PCDHA3-201ENST00000522353 RPS10P5Q9NQ39 176 aa14.81□□□□□ -0.04
PCDHA3-201ENST00000522353 RBFOX1Q9NWB1 397 aaKnown RBP14.81□□□□□ -0.04
PCDHA3-201ENST00000522353 EVPLQ92817 2033 aa14.81□□□□□ -0.04
PCDHA3-201ENST00000522353 TNFSF14O43557 240 aa14.81□□□□□ -0.04
PCDHA3-201ENST00000522353 SSX4O60224 188 aa14.81□□□□□ -0.04
PCDHA3-201ENST00000522353 CLDN1O95832 211 aa14.81□□□□□ -0.04
PCDHA3-201ENST00000522353 RAB13P51153 203 aa14.81□□□□□ -0.04
PCDHA3-201ENST00000522353 EMP3P54852 163 aa14.81□□□□□ -0.04
PCDHA3-201ENST00000522353 DSCR4P56555 118 aaPredicted RBP14.81□□□□□ -0.04
PCDHA3-201ENST00000522353 DBPQ10586 325 aaPredicted RBP14.81□□□□□ -0.04
PCDHA3-201ENST00000522353 LIPNQ5VXI9 398 aa14.81□□□□□ -0.04
PCDHA3-201ENST00000522353 HEPHL1Q6MZM0 1159 aa14.81□□□□□ -0.04
PCDHA3-201ENST00000522353 ZNF573Q86YE8 665 aa14.81□□□□□ -0.04
PCDHA3-201ENST00000522353 LACC1Q8IV20 430 aa14.81□□□□□ -0.04
PCDHA3-201ENST00000522353 GON7Q9BXV9 100 aa14.81□□□□□ -0.04
PCDHA3-201ENST00000522353 HEYLQ9NQ87 328 aaPredicted RBP14.81□□□□□ -0.04
PCDHA3-201ENST00000522353 CMC2Q9NRP2 79 aa14.81□□□□□ -0.04
PCDHA3-201ENST00000522353 CCDC163A0A0D9SF12 145 aa14.81□□□□□ -0.04
PCDHA3-201ENST00000522353 IL9P15248 144 aa14.81□□□□□ -0.04
PCDHA3-201ENST00000522353 SIGLEC14Q08ET2 396 aa14.81□□□□□ -0.04
PCDHA3-201ENST00000522353 BBS1Q8NFJ9 593 aa14.81□□□□□ -0.04
PCDHA3-201ENST00000522353 NAA50Q9GZZ1 169 aaKnown RBP14.81□□□□□ -0.04
PCDHA3-201ENST00000522353 PLCXD1Q9NUJ7 323 aa14.81□□□□□ -0.04
PCDHA3-201ENST00000522353 ZNF346Q9UL40 294 aaKnown RBP14.81□□□□□ -0.04
PCDHA3-201ENST00000522353 SSC5DA1L4H1 1573 aa14.81□□□□□ -0.04
PCDHA3-201ENST00000522353 TRGV5A0A0B4J1U4 118 aa14.8□□□□□ -0.04
PCDHA3-201ENST00000522353 IGHV1OR15-9A0A0B4J2B8 117 aa14.8□□□□□ -0.04
PCDHA3-201ENST00000522353 C5orf49A4QMS7 147 aa14.8□□□□□ -0.04
PCDHA3-201ENST00000522353 FCMRO60667 390 aa14.8□□□□□ -0.04
PCDHA3-201ENST00000522353 TGM6O95932 706 aa14.8□□□□□ -0.04
PCDHA3-201ENST00000522353 GSK3AP49840 483 aa14.8□□□□□ -0.04
PCDHA3-201ENST00000522353 NHSL2Q5HYW2 709 aa14.8□□□□□ -0.04
PCDHA3-201ENST00000522353 BIN3Q9NQY0 253 aa14.8□□□□□ -0.04
PCDHA3-201ENST00000522353 RAF1P04049 648 aa14.8□□□□□ -0.04
PCDHA3-201ENST00000522353 RFC3P40938 356 aa14.8□□□□□ -0.04
PCDHA3-201ENST00000522353 ZNF620Q6ZNG0 422 aa14.8□□□□□ -0.04
PCDHA3-201ENST00000522353 SLC5A6Q9Y289 635 aa14.8□□□□□ -0.04
PCDHA3-201ENST00000522353 HMX2A2RU54 273 aa14.8□□□□□ -0.04
PCDHA3-201ENST00000522353 SH2D1BO14796 132 aa14.8□□□□□ -0.04
PCDHA3-201ENST00000522353 SULT1B1O43704 296 aa14.8□□□□□ -0.04
PCDHA3-201ENST00000522353 RAB6AP20340 208 aa14.8□□□□□ -0.04
PCDHA3-201ENST00000522353 MRPL19P49406 292 aaKnown RBP14.8□□□□□ -0.04
PCDHA3-201ENST00000522353 RPL18Q07020 188 aaKnown RBP14.8□□□□□ -0.04
PCDHA3-201ENST00000522353 DYRK1AQ13627 763 aa14.8□□□□□ -0.04
PCDHA3-201ENST00000522353 FZD2Q14332 565 aa14.8□□□□□ -0.04
PCDHA3-201ENST00000522353 ATPAF1Q5TC12 328 aaPredicted RBP14.8□□□□□ -0.04
PCDHA3-201ENST00000522353 SMIM15Q7Z3B0 74 aa14.8□□□□□ -0.04
PCDHA3-201ENST00000522353 SLC35G3Q8N808 338 aa14.8□□□□□ -0.04
PCDHA3-201ENST00000522353 PLPP7Q8NBV4 271 aa14.8□□□□□ -0.04
PCDHA3-201ENST00000522353 TCTEX1D2Q8WW35 142 aa14.8□□□□□ -0.04
PCDHA3-201ENST00000522353 FCRL1Q96LA6 429 aa14.8□□□□□ -0.04
PCDHA3-201ENST00000522353 UHRF2Q96PU4 802 aa14.8□□□□□ -0.04
PCDHA3-201ENST00000522353 SLC38A1Q9H2H9 487 aa14.8□□□□□ -0.04
PCDHA3-201ENST00000522353 A0A0U1RQK1 487 aa14.8□□□□□ -0.04
PCDHA3-201ENST00000522353 PRKACAP17612 351 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms