RNA–Protein interactions for RNA: ENST00000520451.1

CSMD1-207, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-207ENST00000520451 TMPRSS13Q9BYE2 586 aa12.88□□□□□ -0.35
CSMD1-207ENST00000520451 EGLN1Q9GZT9 426 aa12.88□□□□□ -0.35
CSMD1-207ENST00000520451 CYSLTR2Q9NS75 346 aa12.88□□□□□ -0.35
CSMD1-207ENST00000520451 PCDHB10Q9UN67 800 aa12.88□□□□□ -0.35
CSMD1-207ENST00000520451 TIMM10BQ9Y5J6 103 aa12.88□□□□□ -0.35
CSMD1-207ENST00000520451 ISPDA4D126 451 aa12.87□□□□□ -0.35
CSMD1-207ENST00000520451 A6NIZ1 184 aa12.87□□□□□ -0.35
CSMD1-207ENST00000520451 EFCAB9A8MZ26 197 aa12.87□□□□□ -0.35
CSMD1-207ENST00000520451 H7C1C5 153 aa12.87□□□□□ -0.35
CSMD1-207ENST00000520451 J3KTA2 159 aa12.87□□□□□ -0.35
CSMD1-207ENST00000520451 NGFP01138 241 aa12.87□□□□□ -0.35
CSMD1-207ENST00000520451 IFNW1P05000 195 aa12.87□□□□□ -0.35
CSMD1-207ENST00000520451 H2AFXP16104 143 aaPredicted RBP12.87□□□□□ -0.35
CSMD1-207ENST00000520451 MSR1P21757 451 aa12.87□□□□□ -0.35
CSMD1-207ENST00000520451 FUT4P22083 530 aa12.87□□□□□ -0.35
CSMD1-207ENST00000520451 LIPAP38571 399 aa12.87□□□□□ -0.35
CSMD1-207ENST00000520451 ARHGDIAP52565 204 aa12.87□□□□□ -0.35
CSMD1-207ENST00000520451 RAP1BP61224 184 aa12.87□□□□□ -0.35
CSMD1-207ENST00000520451 LCN6P62502 163 aa12.87□□□□□ -0.35
CSMD1-207ENST00000520451 RAP1AP62834 184 aa12.87□□□□□ -0.35
CSMD1-207ENST00000520451 TRAM2Q15035 370 aa12.87□□□□□ -0.35
CSMD1-207ENST00000520451 DCAF12L2Q5VW00 463 aa12.87□□□□□ -0.35
CSMD1-207ENST00000520451 FOXL2NBQ6ZUU3 175 aa12.87□□□□□ -0.35
CSMD1-207ENST00000520451 C1QL2Q7Z5L3 287 aa12.87□□□□□ -0.35
CSMD1-207ENST00000520451 VTCN1Q7Z7D3 282 aa12.87□□□□□ -0.35
CSMD1-207ENST00000520451 OAFQ86UD1 273 aa12.87□□□□□ -0.35
CSMD1-207ENST00000520451 OFCC1Q8IZS5 231 aa12.87□□□□□ -0.35
CSMD1-207ENST00000520451 LRRC75AQ8NAA5 344 aa12.87□□□□□ -0.35
CSMD1-207ENST00000520451 OR13C2Q8NGS9 318 aa12.87□□□□□ -0.35
CSMD1-207ENST00000520451 RCN3Q96D15 328 aa12.87□□□□□ -0.35
CSMD1-207ENST00000520451 C4orf45Q96LM5 186 aa12.87□□□□□ -0.35
CSMD1-207ENST00000520451 ELOVL3Q9HB03 270 aa12.87□□□□□ -0.35
CSMD1-207ENST00000520451 MAN2C1Q9NTJ4 1040 aa12.87□□□□□ -0.35
CSMD1-207ENST00000520451 CGGBP1Q9UFW8 167 aaPredicted RBP12.87□□□□□ -0.35
CSMD1-207ENST00000520451 SNX13Q9Y5W8 968 aa12.87□□□□□ -0.35
CSMD1-207ENST00000520451 CAPN7Q9Y6W3 813 aa12.87□□□□□ -0.35
CSMD1-207ENST00000520451 C12orf71A8MTZ7 269 aa12.86□□□□□ -0.35
CSMD1-207ENST00000520451 H3BSA7 217 aa12.86□□□□□ -0.35
CSMD1-207ENST00000520451 J3QLI3 93 aa12.86□□□□□ -0.35
CSMD1-207ENST00000520451 TIMM8AO60220 97 aaPredicted RBP12.86□□□□□ -0.35
CSMD1-207ENST00000520451 ICMTO60725 284 aa12.86□□□□□ -0.35
CSMD1-207ENST00000520451 SASH3O75995 380 aa12.86□□□□□ -0.35
CSMD1-207ENST00000520451 UBOX5O94941 541 aa12.86□□□□□ -0.35
CSMD1-207ENST00000520451 ADH4P08319 380 aa12.86□□□□□ -0.35
CSMD1-207ENST00000520451 ADRA2CP18825 462 aa12.86□□□□□ -0.35
CSMD1-207ENST00000520451 CFPP27918 469 aa12.86□□□□□ -0.35
CSMD1-207ENST00000520451 HILS1P60008 231 aa12.86□□□□□ -0.35
CSMD1-207ENST00000520451 PRKCDQ05655 676 aa12.86□□□□□ -0.35
CSMD1-207ENST00000520451 SLC3A1Q07837 685 aa12.86□□□□□ -0.35
CSMD1-207ENST00000520451 FHL1Q13642 323 aa12.86□□□□□ -0.35
CSMD1-207ENST00000520451 ENDOGQ14249 297 aaKnown RBP12.86□□□□□ -0.35
CSMD1-207ENST00000520451 ZMAT1Q5H9K5 638 aa12.86□□□□□ -0.35
CSMD1-207ENST00000520451 CGB2Q6NT52 195 aa12.86□□□□□ -0.35
CSMD1-207ENST00000520451 ARL9Q6T311 187 aa12.86□□□□□ -0.35
CSMD1-207ENST00000520451 USP43Q70EL4 1123 aa12.86□□□□□ -0.35
CSMD1-207ENST00000520451 PEG10Q86TG7 708 aaKnown RBP12.86□□□□□ -0.35
CSMD1-207ENST00000520451 POU5F2Q8N7G0 328 aa12.86□□□□□ -0.35
CSMD1-207ENST00000520451 GEMIN6Q8WXD5 167 aaKnown RBP12.86□□□□□ -0.35
CSMD1-207ENST00000520451 MSL2Q9HCI7 577 aa12.86□□□□□ -0.35
CSMD1-207ENST00000520451 EMC7Q9NPA0 242 aa12.86□□□□□ -0.35
CSMD1-207ENST00000520451 POLE4Q9NR33 117 aa12.86□□□□□ -0.35
CSMD1-207ENST00000520451 CMTM6Q9NX76 183 aa12.86□□□□□ -0.35
CSMD1-207ENST00000520451 UBAP1Q9NZ09 502 aa12.86□□□□□ -0.35
CSMD1-207ENST00000520451 GMPR2Q9P2T1 348 aaKnown RBP12.86□□□□□ -0.35
CSMD1-207ENST00000520451 ZDHHC8Q9ULC8 765 aa12.86□□□□□ -0.35
CSMD1-207ENST00000520451 NDRG4Q9ULP0 352 aaKnown RBP12.86□□□□□ -0.35
CSMD1-207ENST00000520451 FFAR1O14842 300 aa12.85□□□□□ -0.35
CSMD1-207ENST00000520451 ZNF682O95780 498 aa12.85□□□□□ -0.35
CSMD1-207ENST00000520451 ABHD16AO95870 558 aa12.85□□□□□ -0.35
CSMD1-207ENST00000520451 SCG5P05408 212 aa12.85□□□□□ -0.35
CSMD1-207ENST00000520451 RPL4P36578 427 aaKnown RBP12.85□□□□□ -0.35
CSMD1-207ENST00000520451 SLC9A3P48764 834 aa12.85□□□□□ -0.35
CSMD1-207ENST00000520451 LCN2P80188 198 aa12.85□□□□□ -0.35
CSMD1-207ENST00000520451 TNFAIP6P98066 277 aaPredicted RBP12.85□□□□□ -0.35
CSMD1-207ENST00000520451 ANKDD1AQ495B1 522 aa12.85□□□□□ -0.35
CSMD1-207ENST00000520451 SPRNQ5BIV9 151 aa12.85□□□□□ -0.35
CSMD1-207ENST00000520451 MTX3Q5HYI7 312 aa12.85□□□□□ -0.35
CSMD1-207ENST00000520451 ZNF730Q6ZMV8 503 aa12.85□□□□□ -0.35
CSMD1-207ENST00000520451 ARPINQ7Z6K5 226 aa12.85□□□□□ -0.35
CSMD1-207ENST00000520451 SYT9Q86SS6 491 aa12.85□□□□□ -0.35
CSMD1-207ENST00000520451 ACOT11Q8WXI4 607 aaPredicted RBP12.85□□□□□ -0.35
CSMD1-207ENST00000520451 JMJD8Q96S16 334 aa12.85□□□□□ -0.35
CSMD1-207ENST00000520451 DIRC2Q96SL1 478 aa12.85□□□□□ -0.35
CSMD1-207ENST00000520451 ARMCX1Q9P291 453 aa12.85□□□□□ -0.35
CSMD1-207ENST00000520451 AP3M1Q9Y2T2 418 aa12.85□□□□□ -0.35
CSMD1-207ENST00000520451 ADAM18Q9Y3Q7 739 aa12.85□□□□□ -0.35
CSMD1-207ENST00000520451 TRIM77I1YAP6 450 aa12.84□□□□□ -0.35
CSMD1-207ENST00000520451 DOK2O60496 412 aa12.84□□□□□ -0.35
CSMD1-207ENST00000520451 CD55P08174 381 aa12.84□□□□□ -0.35
CSMD1-207ENST00000520451 GSTM3P21266 225 aa12.84□□□□□ -0.35
CSMD1-207ENST00000520451 GATA3P23771 443 aa12.84□□□□□ -0.35
CSMD1-207ENST00000520451 GPR4P46093 362 aa12.84□□□□□ -0.35
CSMD1-207ENST00000520451 HTR5AP47898 357 aa12.84□□□□□ -0.35
CSMD1-207ENST00000520451 LIPEQ05469 1076 aa12.84□□□□□ -0.35
CSMD1-207ENST00000520451 PSG7Q13046 419 aa12.84□□□□□ -0.35
CSMD1-207ENST00000520451 HNRNPA0Q13151 305 aaKnown RBP12.84□□□□□ -0.35
CSMD1-207ENST00000520451 IFI44LQ53G44 452 aa12.84□□□□□ -0.35
CSMD1-207ENST00000520451 TBPL2Q6SJ96 375 aa12.84□□□□□ -0.35
CSMD1-207ENST00000520451 MBOAT2Q6ZWT7 520 aa12.84□□□□□ -0.35
CSMD1-207ENST00000520451 ZER1Q7Z7L7 766 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms