RNA–Protein interactions for RNA: ENST00000517490.5

CPNE3-203, Transcript of copine 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE3, Length 4,865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-203ENST00000517490 PLEKHM1Q9Y4G2 1056 aa6.06□□□□□ -1.44
CPNE3-203ENST00000517490 KCNMB2Q9Y691 235 aa6.06□□□□□ -1.44
CPNE3-203ENST00000517490 POLR2AP24928 1970 aaKnown RBP6.06□□□□□ -1.44
CPNE3-203ENST00000517490 OR6C68A6NDL8 312 aa6.05□□□□□ -1.44
CPNE3-203ENST00000517490 J3KRW8 73 aa6.05□□□□□ -1.44
CPNE3-203ENST00000517490 ABCD4O14678 606 aa6.05□□□□□ -1.44
CPNE3-203ENST00000517490 PTP4A3O75365 173 aa6.05□□□□□ -1.44
CPNE3-203ENST00000517490 VSIG10L2P0DP72 767 aa6.05□□□□□ -1.44
CPNE3-203ENST00000517490 APEHP13798 732 aaKnown RBP6.05□□□□□ -1.44
CPNE3-203ENST00000517490 PVRP15151 417 aa6.05□□□□□ -1.44
CPNE3-203ENST00000517490 ARRB1P49407 418 aaPredicted RBP6.05□□□□□ -1.44
CPNE3-203ENST00000517490 ZNF136P52737 540 aa6.05□□□□□ -1.44
CPNE3-203ENST00000517490 PPP2CBP62714 309 aa6.05□□□□□ -1.44
CPNE3-203ENST00000517490 PPIAP62937 165 aaKnown RBP6.05□□□□□ -1.44
CPNE3-203ENST00000517490 PPP2CAP67775 309 aa6.05□□□□□ -1.44
CPNE3-203ENST00000517490 ZNF674Q2M3X9 581 aa6.05□□□□□ -1.44
CPNE3-203ENST00000517490 FAM199XQ6PEV8 388 aaPredicted RBP6.05□□□□□ -1.44
CPNE3-203ENST00000517490 COX15Q7KZN9 410 aa6.05□□□□□ -1.44
CPNE3-203ENST00000517490 COMTD1Q86VU5 262 aa6.05□□□□□ -1.44
CPNE3-203ENST00000517490 MRPL43Q8N983 215 aaKnown RBP6.05□□□□□ -1.44
CPNE3-203ENST00000517490 OR56B1Q8NGI3 324 aa6.05□□□□□ -1.44
CPNE3-203ENST00000517490 OR51T1Q8NGJ9 327 aa6.05□□□□□ -1.44
CPNE3-203ENST00000517490 OR9A4Q8NGU2 314 aa6.05□□□□□ -1.44
CPNE3-203ENST00000517490 KCNG3Q8TAE7 436 aa6.05□□□□□ -1.44
CPNE3-203ENST00000517490 RAB3CQ96E17 227 aa6.05□□□□□ -1.44
CPNE3-203ENST00000517490 ARSGQ96EG1 525 aa6.05□□□□□ -1.44
CPNE3-203ENST00000517490 MRPS24Q96EL2 167 aaKnown RBP6.05□□□□□ -1.44
CPNE3-203ENST00000517490 FOXN4Q96NZ1 517 aa6.05□□□□□ -1.44
CPNE3-203ENST00000517490 TSSK2Q96PF2 358 aa6.05□□□□□ -1.44
CPNE3-203ENST00000517490 PRSS27Q9BQR3 290 aa6.05□□□□□ -1.44
CPNE3-203ENST00000517490 ST6GALNAC5Q9BVH7 336 aa6.05□□□□□ -1.44
CPNE3-203ENST00000517490 RHOFQ9HBH0 211 aa6.05□□□□□ -1.44
CPNE3-203ENST00000517490 ZNF223Q9UK11 482 aaPredicted RBP6.05□□□□□ -1.44
CPNE3-203ENST00000517490 OR52A1Q9UKL2 312 aa6.05□□□□□ -1.44
CPNE3-203ENST00000517490 SSUH2Q9Y2M2 353 aa6.05□□□□□ -1.44
CPNE3-203ENST00000517490 EMC9Q9Y3B6 208 aa6.05□□□□□ -1.44
CPNE3-203ENST00000517490 PAPPA2Q9BXP8 1791 aa6.05□□□□□ -1.44
CPNE3-203ENST00000517490 OR2M5A3KFT3 312 aa6.05□□□□□ -1.44
CPNE3-203ENST00000517490 C17orf105B2RV13 164 aa6.05□□□□□ -1.44
CPNE3-203ENST00000517490 NKX2-2O95096 273 aa6.05□□□□□ -1.44
CPNE3-203ENST00000517490 PMP2P02689 132 aa6.05□□□□□ -1.44
CPNE3-203ENST00000517490 FABP1P07148 127 aa6.05□□□□□ -1.44
CPNE3-203ENST00000517490 GP1BAP07359 652 aa6.05□□□□□ -1.44
CPNE3-203ENST00000517490 SLC25A4P12235 298 aa6.05□□□□□ -1.44
CPNE3-203ENST00000517490 CBR1P16152 277 aa6.05□□□□□ -1.44
CPNE3-203ENST00000517490 ENPP1P22413 925 aa6.05□□□□□ -1.44
CPNE3-203ENST00000517490 HSD17B7P56937 341 aa6.05□□□□□ -1.44
CPNE3-203ENST00000517490 NKX6-1P78426 367 aaPredicted RBP6.05□□□□□ -1.44
CPNE3-203ENST00000517490 DEFB110Q30KQ9 67 aa6.05□□□□□ -1.44
CPNE3-203ENST00000517490 HIST2H3AQ71DI3 136 aa6.05□□□□□ -1.44
CPNE3-203ENST00000517490 SULF2Q8IWU5 870 aa6.05□□□□□ -1.44
CPNE3-203ENST00000517490 ZNF485Q8NCK3 441 aa6.05□□□□□ -1.44
CPNE3-203ENST00000517490 DAZLQ92904 295 aaKnown RBP6.05□□□□□ -1.44
CPNE3-203ENST00000517490 COX14Q96I36 57 aa6.05□□□□□ -1.44
CPNE3-203ENST00000517490 SYT3Q9BQG1 590 aa6.05□□□□□ -1.44
CPNE3-203ENST00000517490 SMIM3Q9BZL3 60 aa6.05□□□□□ -1.44
CPNE3-203ENST00000517490 STARD5Q9NSY2 213 aa6.05□□□□□ -1.44
CPNE3-203ENST00000517490 GFOD1Q9NXC2 390 aa6.05□□□□□ -1.44
CPNE3-203ENST00000517490 OBP2AQ9NY56 170 aa6.05□□□□□ -1.44
CPNE3-203ENST00000517490 FBXO4Q9UKT5 387 aa6.05□□□□□ -1.44
CPNE3-203ENST00000517490 CES1P1Q9UKY3 287 aa6.05□□□□□ -1.44
CPNE3-203ENST00000517490 HIF3AQ9Y2N7 669 aa6.05□□□□□ -1.44
CPNE3-203ENST00000517490 PATJQ8NI35 1801 aa6.05□□□□□ -1.44
CPNE3-203ENST00000517490 A0A1W2PPV9 198 aa6.05□□□□□ -1.44
CPNE3-203ENST00000517490 OR6C65A6NJZ3 312 aa6.05□□□□□ -1.44
CPNE3-203ENST00000517490 IDSB3KWA1 339 aa6.05□□□□□ -1.44
CPNE3-203ENST00000517490 KLF4O43474 513 aa6.05□□□□□ -1.44
CPNE3-203ENST00000517490 GALR3O60755 368 aaPredicted RBP6.05□□□□□ -1.44
CPNE3-203ENST00000517490 ERGP11308 486 aa6.05□□□□□ -1.44
CPNE3-203ENST00000517490 CD80P33681 288 aa6.05□□□□□ -1.44
CPNE3-203ENST00000517490 RPS10P46783 165 aaKnown RBP6.05□□□□□ -1.44
CPNE3-203ENST00000517490 ATP1B3P54709 279 aa6.05□□□□□ -1.44
CPNE3-203ENST00000517490 CHAF1BQ13112 559 aa6.05□□□□□ -1.44
CPNE3-203ENST00000517490 RBM39Q14498 530 aaKnown RBP6.05□□□□□ -1.44
CPNE3-203ENST00000517490 ISXQ2M1V0 245 aa6.05□□□□□ -1.44
CPNE3-203ENST00000517490 DEFB115Q30KQ5 88 aa6.05□□□□□ -1.44
CPNE3-203ENST00000517490 CST9Q5W186 159 aa6.05□□□□□ -1.44
CPNE3-203ENST00000517490 SEZ6L2Q6UXD5 910 aa6.05□□□□□ -1.44
CPNE3-203ENST00000517490 TMEM184AQ6ZMB5 413 aa6.05□□□□□ -1.44
CPNE3-203ENST00000517490 PRSS58Q8IYP2 241 aa6.05□□□□□ -1.44
CPNE3-203ENST00000517490 METTL27Q8N6F8 245 aaPredicted RBP6.05□□□□□ -1.44
CPNE3-203ENST00000517490 EXD3Q8N9H8 876 aa6.05□□□□□ -1.44
CPNE3-203ENST00000517490 LILRB1Q8NHL6 650 aaPredicted RBP6.05□□□□□ -1.44
CPNE3-203ENST00000517490 SLC22A8Q8TCC7 542 aa6.05□□□□□ -1.44
CPNE3-203ENST00000517490 HSD17B8Q92506 261 aa6.05□□□□□ -1.44
CPNE3-203ENST00000517490 ZNF75AQ96N20 296 aa6.05□□□□□ -1.44
CPNE3-203ENST00000517490 ZNF681Q96N22 645 aa6.05□□□□□ -1.44
CPNE3-203ENST00000517490 USB1Q9BQ65 265 aaKnown RBP6.05□□□□□ -1.44
CPNE3-203ENST00000517490 OR10A5Q9H207 317 aa6.05□□□□□ -1.44
CPNE3-203ENST00000517490 C6orf106Q9H6K1 298 aaPredicted RBP6.05□□□□□ -1.44
CPNE3-203ENST00000517490 LHX9Q9NQ69 397 aa6.05□□□□□ -1.44
CPNE3-203ENST00000517490 THAP10Q9P2Z0 257 aaPredicted RBP6.05□□□□□ -1.44
CPNE3-203ENST00000517490 CHRNA9Q9UGM1 479 aa6.05□□□□□ -1.44
CPNE3-203ENST00000517490 ZNF107Q9UII5 783 aaPredicted RBP6.05□□□□□ -1.44
CPNE3-203ENST00000517490 JTBO76095 146 aa6.05□□□□□ -1.44
CPNE3-203ENST00000517490 MT-ATP6P00846 226 aa6.05□□□□□ -1.44
CPNE3-203ENST00000517490 CXCL10P02778 98 aa6.05□□□□□ -1.44
CPNE3-203ENST00000517490 SMIM6P0DI80 62 aa6.05□□□□□ -1.44
CPNE3-203ENST00000517490 AFF3P51826 1226 aaKnown RBP6.05□□□□□ -1.44
CPNE3-203ENST00000517490 F2RL1P55085 397 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms