RNA–Protein interactions for RNA: ENST00000515397.1

VCAN-212, Transcript of versican, humanhuman

TSL 2

Gene VCAN, Length 536 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-212ENST00000515397 TIMM10BQ9Y5J6 103 aa9.86□□□□□ -0.83
VCAN-212ENST00000515397 FKBP7Q9Y680 259 aa9.86□□□□□ -0.83
VCAN-212ENST00000515397 ANK3Q12955 4377 aaKnown RBP9.86□□□□□ -0.83
VCAN-212ENST00000515397 SVEP1Q4LDE5 3571 aa9.85□□□□□ -0.83
VCAN-212ENST00000515397 VWC2LB2RUY7 222 aa9.85□□□□□ -0.83
VCAN-212ENST00000515397 M0R233 179 aa9.85□□□□□ -0.83
VCAN-212ENST00000515397 UBOX5O94941 541 aa9.85□□□□□ -0.83
VCAN-212ENST00000515397 STAMBPO95630 424 aa9.85□□□□□ -0.83
VCAN-212ENST00000515397 PTHP01270 115 aa9.85□□□□□ -0.83
VCAN-212ENST00000515397 GASTP01350 101 aa9.85□□□□□ -0.83
VCAN-212ENST00000515397 CST2P09228 141 aa9.85□□□□□ -0.83
VCAN-212ENST00000515397 HIST1H1CP16403 213 aaKnown RBP9.85□□□□□ -0.83
VCAN-212ENST00000515397 MSR1P21757 451 aa9.85□□□□□ -0.83
VCAN-212ENST00000515397 USF1P22415 310 aaPredicted RBP9.85□□□□□ -0.83
VCAN-212ENST00000515397 SDHAP31040 664 aa9.85□□□□□ -0.83
VCAN-212ENST00000515397 MPV17P39210 176 aa9.85□□□□□ -0.83
VCAN-212ENST00000515397 NR4A2P43354 598 aa9.85□□□□□ -0.83
VCAN-212ENST00000515397 GDI2P50395 445 aaKnown RBP9.85□□□□□ -0.83
VCAN-212ENST00000515397 TRIP10Q15642 601 aa9.85□□□□□ -0.83
VCAN-212ENST00000515397 RFX4Q33E94 735 aa9.85□□□□□ -0.83
VCAN-212ENST00000515397 NRN1LQ496H8 165 aa9.85□□□□□ -0.83
VCAN-212ENST00000515397 TMEM255AQ5JRV8 349 aa9.85□□□□□ -0.83
VCAN-212ENST00000515397 C1orf94Q6P1W5 598 aa9.85□□□□□ -0.83
VCAN-212ENST00000515397 FOXL2NBQ6ZUU3 175 aa9.85□□□□□ -0.83
VCAN-212ENST00000515397 TRPM8Q7Z2W7 1104 aa9.85□□□□□ -0.83
VCAN-212ENST00000515397 OR1J2Q8NGS2 313 aa9.85□□□□□ -0.83
VCAN-212ENST00000515397 SYNPRQ8TBG9 265 aa9.85□□□□□ -0.83
VCAN-212ENST00000515397 GNPDA2Q8TDQ7 276 aa9.85□□□□□ -0.83
VCAN-212ENST00000515397 UBASH3BQ8TF42 649 aa9.85□□□□□ -0.83
VCAN-212ENST00000515397 C11orf40Q8WZ69 217 aa9.85□□□□□ -0.83
VCAN-212ENST00000515397 NMNAT3Q96T66 252 aa9.85□□□□□ -0.83
VCAN-212ENST00000515397 BTBD10Q9BSF8 475 aa9.85□□□□□ -0.83
VCAN-212ENST00000515397 IFT27Q9BW83 186 aa9.85□□□□□ -0.83
VCAN-212ENST00000515397 BPESC1Q9GZL8 116 aa9.85□□□□□ -0.83
VCAN-212ENST00000515397 LRMDAQ9H2I8 198 aa9.85□□□□□ -0.83
VCAN-212ENST00000515397 FN3KQ9H479 309 aa9.85□□□□□ -0.83
VCAN-212ENST00000515397 EGLN3Q9H6Z9 239 aa9.85□□□□□ -0.83
VCAN-212ENST00000515397 FBXL3Q9UKT7 428 aa9.85□□□□□ -0.83
VCAN-212ENST00000515397 LYVE1Q9Y5Y7 322 aa9.85□□□□□ -0.83
VCAN-212ENST00000515397 U3KQV3 271 aa9.85□□□□□ -0.83
VCAN-212ENST00000515397 C12orf71A8MTZ7 269 aa9.84□□□□□ -0.83
VCAN-212ENST00000515397 CD5LO43866 347 aa9.84□□□□□ -0.83
VCAN-212ENST00000515397 KHDRBS3O75525 346 aaKnown RBP9.84□□□□□ -0.83
VCAN-212ENST00000515397 NCR1O76036 304 aa9.84□□□□□ -0.83
VCAN-212ENST00000515397 IGHV4-31P0DP07 118 aa9.84□□□□□ -0.83
VCAN-212ENST00000515397 NR2C1P13056 603 aa9.84□□□□□ -0.83
VCAN-212ENST00000515397 SLC25A16P16260 332 aa9.84□□□□□ -0.83
VCAN-212ENST00000515397 FPR3P25089 353 aa9.84□□□□□ -0.83
VCAN-212ENST00000515397 RAD52P43351 418 aa9.84□□□□□ -0.83
VCAN-212ENST00000515397 MAGEB1P43366 347 aa9.84□□□□□ -0.83
VCAN-212ENST00000515397 GSSP48637 474 aa9.84□□□□□ -0.83
VCAN-212ENST00000515397 EVX1P49640 407 aa9.84□□□□□ -0.83
VCAN-212ENST00000515397 RPS6KA3P51812 740 aa9.84□□□□□ -0.83
VCAN-212ENST00000515397 RPS23P62266 143 aaKnown RBP9.84□□□□□ -0.83
VCAN-212ENST00000515397 LOXL1Q08397 574 aaPredicted RBP9.84□□□□□ -0.83
VCAN-212ENST00000515397 NKPD1Q17RQ9 610 aa9.84□□□□□ -0.83
VCAN-212ENST00000515397 SPATS1Q496A3 300 aa9.84□□□□□ -0.83
VCAN-212ENST00000515397 GPR139Q6DWJ6 353 aa9.84□□□□□ -0.83
VCAN-212ENST00000515397 LEG1Q6P5S2 330 aa9.84□□□□□ -0.83
VCAN-212ENST00000515397 CORO6Q6QEF8 472 aa9.84□□□□□ -0.83
VCAN-212ENST00000515397 RFPL4BQ6ZWI9 263 aa9.84□□□□□ -0.83
VCAN-212ENST00000515397 DPPA2Q7Z7J5 298 aa9.84□□□□□ -0.83
VCAN-212ENST00000515397 PRIMA1Q86XR5 153 aa9.84□□□□□ -0.83
VCAN-212ENST00000515397 OR4C15Q8NGM1 316 aa9.84□□□□□ -0.83
VCAN-212ENST00000515397 ABHD4Q8TB40 342 aa9.84□□□□□ -0.83
VCAN-212ENST00000515397 SLC25A40Q8TBP6 338 aa9.84□□□□□ -0.83
VCAN-212ENST00000515397 GPX7Q96SL4 187 aaPredicted RBP9.84□□□□□ -0.83
VCAN-212ENST00000515397 PIMREGQ9BSJ6 248 aa9.84□□□□□ -0.83
VCAN-212ENST00000515397 SOX7Q9BT81 388 aa9.84□□□□□ -0.83
VCAN-212ENST00000515397 PLA2G12AQ9BZM1 189 aa9.84□□□□□ -0.83
VCAN-212ENST00000515397 OR2J1Q9GZK6 312 aa9.84□□□□□ -0.83
VCAN-212ENST00000515397 NDEL1Q9GZM8 345 aa9.84□□□□□ -0.83
VCAN-212ENST00000515397 POFUT1Q9H488 388 aa9.84□□□□□ -0.83
VCAN-212ENST00000515397 NARFLQ9H6Q4 476 aa9.84□□□□□ -0.83
VCAN-212ENST00000515397 KRCC1Q9NPI7 259 aaPredicted RBP9.84□□□□□ -0.83
VCAN-212ENST00000515397 TREM2Q9NZC2 230 aa9.84□□□□□ -0.83
VCAN-212ENST00000515397 VSX1Q9NZR4 365 aaPredicted RBP9.84□□□□□ -0.83
VCAN-212ENST00000515397 EIF3KQ9UBQ5 218 aaKnown RBP9.84□□□□□ -0.83
VCAN-212ENST00000515397 LOC390937A0A1W2PQ73 354 aa9.83□□□□□ -0.84
VCAN-212ENST00000515397 KIAA1324LA8MWY0 1029 aaPredicted RBP9.83□□□□□ -0.84
VCAN-212ENST00000515397 RER1O15258 196 aa9.83□□□□□ -0.84
VCAN-212ENST00000515397 CDC14BO60729 498 aa9.83□□□□□ -0.84
VCAN-212ENST00000515397 CCNB2O95067 398 aa9.83□□□□□ -0.84
VCAN-212ENST00000515397 SNAP29O95721 258 aa9.83□□□□□ -0.84
VCAN-212ENST00000515397 TXNDC12O95881 172 aa9.83□□□□□ -0.84
VCAN-212ENST00000515397 DBHP09172 617 aa9.83□□□□□ -0.84
VCAN-212ENST00000515397 ZNF250P15622 560 aa9.83□□□□□ -0.84
VCAN-212ENST00000515397 NOS3P29474 1203 aa9.83□□□□□ -0.84
VCAN-212ENST00000515397 SLC6A6P31641 620 aa9.83□□□□□ -0.84
VCAN-212ENST00000515397 IL2RGP31785 369 aa9.83□□□□□ -0.84
VCAN-212ENST00000515397 HTR5AP47898 357 aa9.83□□□□□ -0.84
VCAN-212ENST00000515397 KLF3P57682 345 aaPredicted RBP9.83□□□□□ -0.84
VCAN-212ENST00000515397 PCBD1P61457 104 aa9.83□□□□□ -0.84
VCAN-212ENST00000515397 CCL8P80075 99 aa9.83□□□□□ -0.84
VCAN-212ENST00000515397 TSPAN31Q12999 210 aa9.83□□□□□ -0.84
VCAN-212ENST00000515397 TSTQ16762 297 aaKnown RBP9.83□□□□□ -0.84
VCAN-212ENST00000515397 ELFN2Q5R3F8 820 aa9.83□□□□□ -0.84
VCAN-212ENST00000515397 LCN8Q6JVE9 175 aa9.83□□□□□ -0.84
VCAN-212ENST00000515397 JAZF1Q86VZ6 243 aa9.83□□□□□ -0.84
VCAN-212ENST00000515397 ALDH16A1Q8IZ83 802 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms