RNA–Protein interactions for RNA: ENST00000513318.1

HMGXB3-204, Transcript of HMG-box containing 3, humanhuman

TSL 3

Gene HMGXB3, Length 749 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-204ENST00000513318 IL4I1Q96RQ9 567 aa6.63□□□□□ -1.35
HMGXB3-204ENST00000513318 APOL4Q9BPW4 351 aa6.63□□□□□ -1.35
HMGXB3-204ENST00000513318 WACQ9BTA9 647 aa6.63□□□□□ -1.35
HMGXB3-204ENST00000513318 HCAR1Q9BXC0 346 aa6.63□□□□□ -1.35
HMGXB3-204ENST00000513318 KCNN2Q9H2S1 579 aa6.63□□□□□ -1.35
HMGXB3-204ENST00000513318 MED20Q9H944 212 aa6.63□□□□□ -1.35
HMGXB3-204ENST00000513318 SRA1Q9HD15 236 aaKnown RBP6.63□□□□□ -1.35
HMGXB3-204ENST00000513318 NGBQ9NPG2 151 aa6.63□□□□□ -1.35
HMGXB3-204ENST00000513318 ZNF226Q9NYT6 803 aa6.63□□□□□ -1.35
HMGXB3-204ENST00000513318 H2AFY2Q9P0M6 372 aaPredicted RBP6.63□□□□□ -1.35
HMGXB3-204ENST00000513318 MOKQ9UQ07 419 aa6.63□□□□□ -1.35
HMGXB3-204ENST00000513318 POLR1DQ9Y2S0 133 aa6.63□□□□□ -1.35
HMGXB3-204ENST00000513318 SLC25A15Q9Y619 301 aa6.63□□□□□ -1.35
HMGXB3-204ENST00000513318 SLC22A31A6NKX4 558 aa6.62□□□□□ -1.35
HMGXB3-204ENST00000513318 C12orf71A8MTZ7 269 aa6.62□□□□□ -1.35
HMGXB3-204ENST00000513318 GOSR1O95249 250 aa6.62□□□□□ -1.35
HMGXB3-204ENST00000513318 HLA-DQA2P01906 255 aa6.62□□□□□ -1.35
HMGXB3-204ENST00000513318 CST2P09228 141 aa6.62□□□□□ -1.35
HMGXB3-204ENST00000513318 EPXP11678 715 aa6.62□□□□□ -1.35
HMGXB3-204ENST00000513318 ZNF32P17041 273 aa6.62□□□□□ -1.35
HMGXB3-204ENST00000513318 SLC2A5P22732 501 aa6.62□□□□□ -1.35
HMGXB3-204ENST00000513318 CRYGSP22914 178 aa6.62□□□□□ -1.35
HMGXB3-204ENST00000513318 FMO3P31513 532 aa6.62□□□□□ -1.35
HMGXB3-204ENST00000513318 PYCR1P32322 319 aa6.62□□□□□ -1.35
HMGXB3-204ENST00000513318 KIR2DL3P43628 341 aa6.62□□□□□ -1.35
HMGXB3-204ENST00000513318 CAPZA2P47755 286 aa6.62□□□□□ -1.35
HMGXB3-204ENST00000513318 CDH11P55287 796 aa6.62□□□□□ -1.35
HMGXB3-204ENST00000513318 PCBD1P61457 104 aa6.62□□□□□ -1.35
HMGXB3-204ENST00000513318 RPS7P62081 194 aaKnown RBP6.62□□□□□ -1.35
HMGXB3-204ENST00000513318 SNRPGP62308 76 aaKnown RBP6.62□□□□□ -1.35
HMGXB3-204ENST00000513318 ADARB1P78563 741 aaKnown RBP6.62□□□□□ -1.35
HMGXB3-204ENST00000513318 SCRN3Q0VDG4 424 aa6.62□□□□□ -1.35
HMGXB3-204ENST00000513318 APOFQ13790 326 aa6.62□□□□□ -1.35
HMGXB3-204ENST00000513318 SNTB1Q13884 538 aaKnown RBP6.62□□□□□ -1.35
HMGXB3-204ENST00000513318 ENDOGQ14249 297 aaKnown RBP6.62□□□□□ -1.35
HMGXB3-204ENST00000513318 SNCBQ16143 134 aa6.62□□□□□ -1.35
HMGXB3-204ENST00000513318 KCNMB1Q16558 191 aa6.62□□□□□ -1.35
HMGXB3-204ENST00000513318 GSG1Q2KHT4 349 aa6.62□□□□□ -1.35
HMGXB3-204ENST00000513318 C3orf36Q3SXR2 165 aa6.62□□□□□ -1.35
HMGXB3-204ENST00000513318 LINC01590Q5TEZ4 76 aa6.62□□□□□ -1.35
HMGXB3-204ENST00000513318 AADACL4Q5VUY2 407 aa6.62□□□□□ -1.35
HMGXB3-204ENST00000513318 ZNF691Q5VV52 312 aa6.62□□□□□ -1.35
HMGXB3-204ENST00000513318 MEDAGQ5VYS4 303 aa6.62□□□□□ -1.35
HMGXB3-204ENST00000513318 TMEM53Q6P2H8 277 aa6.62□□□□□ -1.35
HMGXB3-204ENST00000513318 IZUMO2Q6UXV1 221 aa6.62□□□□□ -1.35
HMGXB3-204ENST00000513318 SYT9Q86SS6 491 aa6.62□□□□□ -1.35
HMGXB3-204ENST00000513318 SKA3Q8IX90 412 aa6.62□□□□□ -1.35
HMGXB3-204ENST00000513318 ENTHD1Q8IYW4 607 aa6.62□□□□□ -1.35
HMGXB3-204ENST00000513318 LRRC18Q8N456 261 aa6.62□□□□□ -1.35
HMGXB3-204ENST00000513318 FAM169BQ8N8A8 192 aa6.62□□□□□ -1.35
HMGXB3-204ENST00000513318 WDR31Q8NA23 367 aa6.62□□□□□ -1.35
HMGXB3-204ENST00000513318 OR51L1Q8NGJ5 315 aa6.62□□□□□ -1.35
HMGXB3-204ENST00000513318 LINC01560Q8TB33 94 aa6.62□□□□□ -1.35
HMGXB3-204ENST00000513318 FAM222BQ8WU58 562 aa6.62□□□□□ -1.35
HMGXB3-204ENST00000513318 HTRA1Q92743 480 aa6.62□□□□□ -1.35
HMGXB3-204ENST00000513318 PTP4A1Q93096 173 aa6.62□□□□□ -1.35
HMGXB3-204ENST00000513318 RFKQ969G6 155 aa6.62□□□□□ -1.35
HMGXB3-204ENST00000513318 ZC3HAV1LQ96H79 300 aaKnown RBP6.62□□□□□ -1.35
HMGXB3-204ENST00000513318 FOXN4Q96NZ1 517 aa6.62□□□□□ -1.35
HMGXB3-204ENST00000513318 WFIKKN1Q96NZ8 548 aa6.62□□□□□ -1.35
HMGXB3-204ENST00000513318 SH3GL3Q99963 347 aa6.62□□□□□ -1.35
HMGXB3-204ENST00000513318 SPOCK3Q9BQ16 436 aa6.62□□□□□ -1.35
HMGXB3-204ENST00000513318 OR51V1Q9H2C8 321 aa6.62□□□□□ -1.35
HMGXB3-204ENST00000513318 MARCH7Q9H992 704 aa6.62□□□□□ -1.35
HMGXB3-204ENST00000513318 EMC7Q9NPA0 242 aa6.62□□□□□ -1.35
HMGXB3-204ENST00000513318 CCNB1IP1Q9NPC3 277 aa6.62□□□□□ -1.35
HMGXB3-204ENST00000513318 MRPL22Q9NWU5 206 aaKnown RBP6.62□□□□□ -1.35
HMGXB3-204ENST00000513318 ZNF224Q9NZL3 707 aa6.62□□□□□ -1.35
HMGXB3-204ENST00000513318 CRIM1Q9NZV1 1036 aa6.62□□□□□ -1.35
HMGXB3-204ENST00000513318 PLEKHB1Q9UF11 243 aaPredicted RBP6.62□□□□□ -1.35
HMGXB3-204ENST00000513318 KCNG2Q9UJ96 466 aa6.62□□□□□ -1.35
HMGXB3-204ENST00000513318 FBXL3Q9UKT7 428 aa6.62□□□□□ -1.35
HMGXB3-204ENST00000513318 COMMD3-BMI1R4GMX3 469 aa6.62□□□□□ -1.35
HMGXB3-204ENST00000513318 A0A1W2PR80 420 aa6.61□□□□□ -1.35
HMGXB3-204ENST00000513318 ZNF503-AS2A6NEH8 195 aa6.61□□□□□ -1.35
HMGXB3-204ENST00000513318 CCDC182A6NF36 153 aa6.61□□□□□ -1.35
HMGXB3-204ENST00000513318 TVP23AA6NH52 213 aa6.61□□□□□ -1.35
HMGXB3-204ENST00000513318 SNTNA6NMZ2 147 aa6.61□□□□□ -1.35
HMGXB3-204ENST00000513318 FAM171A2A8MVW0 826 aa6.61□□□□□ -1.35
HMGXB3-204ENST00000513318 CASKO14936 926 aa6.61□□□□□ -1.35
HMGXB3-204ENST00000513318 RAB36O95755 333 aa6.61□□□□□ -1.35
HMGXB3-204ENST00000513318 GPANK1O95872 356 aa6.61□□□□□ -1.35
HMGXB3-204ENST00000513318 IGKV3-15P01624 115 aa6.61□□□□□ -1.35
HMGXB3-204ENST00000513318 HLA-HP01893 362 aa6.61□□□□□ -1.35
HMGXB3-204ENST00000513318 TFP02787 698 aa6.61□□□□□ -1.35
HMGXB3-204ENST00000513318 THBDP07204 575 aa6.61□□□□□ -1.35
HMGXB3-204ENST00000513318 MMP7P09237 267 aaPredicted RBP6.61□□□□□ -1.35
HMGXB3-204ENST00000513318 CD79AP11912 226 aa6.61□□□□□ -1.35
HMGXB3-204ENST00000513318 COX6B1P14854 86 aa6.61□□□□□ -1.35
HMGXB3-204ENST00000513318 CBR1P16152 277 aa6.61□□□□□ -1.35
HMGXB3-204ENST00000513318 ZNF823P16415 610 aa6.61□□□□□ -1.35
HMGXB3-204ENST00000513318 GABRB1P18505 474 aa6.61□□□□□ -1.35
HMGXB3-204ENST00000513318 GSTT1P30711 240 aa6.61□□□□□ -1.35
HMGXB3-204ENST00000513318 ARR3P36575 388 aa6.61□□□□□ -1.35
HMGXB3-204ENST00000513318 ENTPD1P49961 510 aa6.61□□□□□ -1.35
HMGXB3-204ENST00000513318 NR1H2P55055 460 aa6.61□□□□□ -1.35
HMGXB3-204ENST00000513318 RAB1AP62820 205 aa6.61□□□□□ -1.35
HMGXB3-204ENST00000513318 TUBA1BP68363 451 aa6.61□□□□□ -1.35
HMGXB3-204ENST00000513318 TUBA4AP68366 448 aa6.61□□□□□ -1.35
HMGXB3-204ENST00000513318 ADAM8P78325 824 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms