RNA–Protein interactions for RNA: ENST00000511426.5

SCLT1-209, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-209ENST00000511426 ELOVL3Q9HB03 270 aa13.47□□□□□ -0.25
SCLT1-209ENST00000511426 ING1Q9UK53 422 aaPredicted RBP13.47□□□□□ -0.25
SCLT1-209ENST00000511426 POLR1DQ9Y2S0 133 aa13.47□□□□□ -0.25
SCLT1-209ENST00000511426 NOSIPQ9Y314 301 aaKnown RBP13.47□□□□□ -0.25
SCLT1-209ENST00000511426 UGT2A1Q9Y4X1 527 aa13.47□□□□□ -0.25
SCLT1-209ENST00000511426 LIPGQ9Y5X9 500 aa13.47□□□□□ -0.25
SCLT1-209ENST00000511426 KIAA1549Q9HCM3 1950 aa13.46□□□□□ -0.25
SCLT1-209ENST00000511426 CFAP54Q96N23 3096 aa13.46□□□□□ -0.25
SCLT1-209ENST00000511426 PRR32B1ATL7 298 aa13.46□□□□□ -0.26
SCLT1-209ENST00000511426 MRPL33O75394 65 aaKnown RBP13.46□□□□□ -0.26
SCLT1-209ENST00000511426 CRYABP02511 175 aaKnown RBP13.46□□□□□ -0.26
SCLT1-209ENST00000511426 PAX7P23759 505 aa13.46□□□□□ -0.26
SCLT1-209ENST00000511426 ROR2Q01974 943 aaKnown RBP13.46□□□□□ -0.26
SCLT1-209ENST00000511426 SRYQ05066 204 aa13.46□□□□□ -0.26
SCLT1-209ENST00000511426 DYNC1I2Q13409 638 aaKnown RBP13.46□□□□□ -0.26
SCLT1-209ENST00000511426 SF3B4Q15427 424 aaKnown RBP eCLIP13.46□□□□□ -0.265e-6■■■■□ 26.7
SCLT1-209ENST00000511426 SOWAHCQ53LP3 525 aaPredicted RBP13.46□□□□□ -0.26
SCLT1-209ENST00000511426 TMEM91Q6ZNR0 172 aa13.46□□□□□ -0.26
SCLT1-209ENST00000511426 OR2G2Q8NGZ5 317 aa13.46□□□□□ -0.26
SCLT1-209ENST00000511426 MCFD2Q8NI22 146 aa13.46□□□□□ -0.26
SCLT1-209ENST00000511426 ABHD3Q8WU67 409 aa13.46□□□□□ -0.26
SCLT1-209ENST00000511426 HDHD5Q9BXW7 423 aa13.46□□□□□ -0.26
SCLT1-209ENST00000511426 TTTY10Q9BZA0 68 aa13.46□□□□□ -0.26
SCLT1-209ENST00000511426 MOB1AQ9H8S9 216 aa13.46□□□□□ -0.26
SCLT1-209ENST00000511426 SEC61A2Q9H9S3 476 aa13.46□□□□□ -0.26
SCLT1-209ENST00000511426 SLCO1C1Q9NYB5 712 aa13.46□□□□□ -0.26
SCLT1-209ENST00000511426 CRNNQ9UBG3 495 aaPredicted RBP13.46□□□□□ -0.26
SCLT1-209ENST00000511426 B3GNT3Q9Y2A9 372 aa13.46□□□□□ -0.26
SCLT1-209ENST00000511426 GRIP1Q9Y3R0 1128 aa13.46□□□□□ -0.26
SCLT1-209ENST00000511426 IQCMA0A1B0GVH7 501 aa13.45□□□□□ -0.26
SCLT1-209ENST00000511426 ZNF878C9JN71 531 aa13.45□□□□□ -0.26
SCLT1-209ENST00000511426 MPZL1O95297 269 aa13.45□□□□□ -0.26
SCLT1-209ENST00000511426 ITGB2P05107 769 aa13.45□□□□□ -0.26
SCLT1-209ENST00000511426 YES1P07947 543 aa13.45□□□□□ -0.26
SCLT1-209ENST00000511426 MYL9P24844 172 aa13.45□□□□□ -0.26
SCLT1-209ENST00000511426 OPRL1P41146 370 aa13.45□□□□□ -0.26
SCLT1-209ENST00000511426 MMP16P51512 607 aa13.45□□□□□ -0.26
SCLT1-209ENST00000511426 ZNF829Q3KNS6 432 aaPredicted RBP13.45□□□□□ -0.26
SCLT1-209ENST00000511426 RPTNQ6XPR3 784 aa13.45□□□□□ -0.26
SCLT1-209ENST00000511426 SYT9Q86SS6 491 aa13.45□□□□□ -0.26
SCLT1-209ENST00000511426 SIAH3Q8IW03 269 aa13.45□□□□□ -0.26
SCLT1-209ENST00000511426 MCEMP1Q8IX19 187 aa13.45□□□□□ -0.26
SCLT1-209ENST00000511426 OR5AK2Q8NH90 309 aa13.45□□□□□ -0.26
SCLT1-209ENST00000511426 RNF166Q96A37 237 aaPredicted RBP13.45□□□□□ -0.26
SCLT1-209ENST00000511426 SLCO5A1Q9H2Y9 848 aa13.45□□□□□ -0.26
SCLT1-209ENST00000511426 SPRR3Q9UBC9 169 aa13.45□□□□□ -0.26
SCLT1-209ENST00000511426 LRP12Q9Y561 859 aa13.45□□□□□ -0.26
SCLT1-209ENST00000511426 TRAV1-2A0A0B4J238 106 aa13.44□□□□□ -0.26
SCLT1-209ENST00000511426 ZNF879B4DU55 563 aa13.44□□□□□ -0.26
SCLT1-209ENST00000511426 RPL36A-HNRNPH2H7BZ11 118 aa13.44□□□□□ -0.26
SCLT1-209ENST00000511426 RAF1P04049 648 aa13.44□□□□□ -0.26
SCLT1-209ENST00000511426 H2BFMP0C1H6 154 aa13.44□□□□□ -0.26
SCLT1-209ENST00000511426 PSKH1P11801 424 aa13.44□□□□□ -0.26
SCLT1-209ENST00000511426 PEX19P40855 299 aa13.44□□□□□ -0.26
SCLT1-209ENST00000511426 ACSM3Q53FZ2 586 aa13.44□□□□□ -0.26
SCLT1-209ENST00000511426 FAM27BQ5VT28 67 aa13.44□□□□□ -0.26
SCLT1-209ENST00000511426 LRRN1Q6UXK5 716 aa13.44□□□□□ -0.26
SCLT1-209ENST00000511426 UNQ9370/PRO34162Q6UXP9 181 aa13.44□□□□□ -0.26
SCLT1-209ENST00000511426 ADGRE4PQ86SQ3 457 aa13.44□□□□□ -0.26
SCLT1-209ENST00000511426 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.44□□□□□ -0.26
SCLT1-209ENST00000511426 GJC3Q8NFK1 279 aa13.44□□□□□ -0.26
SCLT1-209ENST00000511426 SLAMF6Q96DU3 332 aa13.44□□□□□ -0.26
SCLT1-209ENST00000511426 C4orf45Q96LM5 186 aa13.44□□□□□ -0.26
SCLT1-209ENST00000511426 FOXN4Q96NZ1 517 aa13.44□□□□□ -0.26
SCLT1-209ENST00000511426 AMELYQ99218 206 aa13.44□□□□□ -0.26
SCLT1-209ENST00000511426 RNF167Q9H6Y7 350 aa13.44□□□□□ -0.26
SCLT1-209ENST00000511426 GDF2Q9UK05 429 aaPredicted RBP13.44□□□□□ -0.26
SCLT1-209ENST00000511426 PEX16Q9Y5Y5 336 aa13.44□□□□□ -0.26
SCLT1-209ENST00000511426 LHFPL6Q9Y693 200 aa13.44□□□□□ -0.26
SCLT1-209ENST00000511426 R4GMQ9 66 aa13.44□□□□□ -0.26
SCLT1-209ENST00000511426 OR4C45A6NMZ5 311 aa13.44□□□□□ -0.26
SCLT1-209ENST00000511426 CASKO14936 926 aa13.44□□□□□ -0.26
SCLT1-209ENST00000511426 MAGEB4O15481 346 aaPredicted RBP13.44□□□□□ -0.26
SCLT1-209ENST00000511426 ZFPL1O95159 310 aa13.44□□□□□ -0.26
SCLT1-209ENST00000511426 CDRT1O95170 752 aa13.44□□□□□ -0.26
SCLT1-209ENST00000511426 ADRB1P08588 477 aa13.44□□□□□ -0.26
SCLT1-209ENST00000511426 UCHL1P09936 223 aa13.44□□□□□ -0.26
SCLT1-209ENST00000511426 TGFBR1P36897 503 aa13.44□□□□□ -0.26
SCLT1-209ENST00000511426 RPS19P39019 145 aaKnown RBP13.44□□□□□ -0.26
SCLT1-209ENST00000511426 RPS27P42677 84 aaKnown RBP13.44□□□□□ -0.26
SCLT1-209ENST00000511426 GRB2P62993 217 aaKnown RBP13.44□□□□□ -0.26
SCLT1-209ENST00000511426 PMP22Q01453 160 aa13.44□□□□□ -0.26
SCLT1-209ENST00000511426 ZMAT1Q5H9K5 638 aa13.44□□□□□ -0.26
SCLT1-209ENST00000511426 KLHL24Q6TFL4 600 aa13.44□□□□□ -0.26
SCLT1-209ENST00000511426 ABHD12BQ7Z5M8 362 aaPredicted RBP13.44□□□□□ -0.26
SCLT1-209ENST00000511426 OR6Q1Q8NGQ2 317 aa13.44□□□□□ -0.26
SCLT1-209ENST00000511426 FNDC9Q8TBE3 224 aa13.44□□□□□ -0.26
SCLT1-209ENST00000511426 GPR148Q8TDV2 347 aa13.44□□□□□ -0.26
SCLT1-209ENST00000511426 NABP1Q96AH0 204 aa13.44□□□□□ -0.26
SCLT1-209ENST00000511426 MAP6Q96JE9 813 aa13.44□□□□□ -0.26
SCLT1-209ENST00000511426 RBM24Q9BX46 236 aaKnown RBP13.44□□□□□ -0.26
SCLT1-209ENST00000511426 WDR12Q9GZL7 423 aaKnown RBP13.44□□□□□ -0.26
SCLT1-209ENST00000511426 HMG20AQ9NP66 347 aa13.44□□□□□ -0.26
SCLT1-209ENST00000511426 DDX28Q9NUL7 540 aaKnown RBP13.44□□□□□ -0.26
SCLT1-209ENST00000511426 FRRS1LQ9P0K9 344 aa13.44□□□□□ -0.26
SCLT1-209ENST00000511426 CAMK2AQ9UQM7 478 aa13.44□□□□□ -0.26
SCLT1-209ENST00000511426 ANKRD61A6NGH8 418 aa13.43□□□□□ -0.26
SCLT1-209ENST00000511426 CD8B2A6NJW9 211 aa13.43□□□□□ -0.26
SCLT1-209ENST00000511426 ACOD1A6NK06 481 aa13.43□□□□□ -0.26
SCLT1-209ENST00000511426 SLC22A20A6NK97 555 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms