RNA–Protein interactions for RNA: ENST00000511198.5

GYPB-212, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 444 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-212ENST00000511198 DEFB121Q5J5C9 76 aa4.55□□□□□ -1.68
GYPB-212ENST00000511198 CCNJQ5T5M9 372 aa4.55□□□□□ -1.68
GYPB-212ENST00000511198 SERTAD4-AS1Q5TG53 156 aa4.55□□□□□ -1.68
GYPB-212ENST00000511198 TMEM236Q5W0B7 351 aa4.55□□□□□ -1.68
GYPB-212ENST00000511198 MSANTD1Q6ZTZ1 278 aa4.55□□□□□ -1.68
GYPB-212ENST00000511198 GPRIN3Q6ZVF9 776 aa4.55□□□□□ -1.68
GYPB-212ENST00000511198 RPS27LQ71UM5 84 aaKnown RBP4.55□□□□□ -1.68
GYPB-212ENST00000511198 PAGE2Q7Z2X7 111 aa4.55□□□□□ -1.68
GYPB-212ENST00000511198 NOXA1Q86UR1 476 aa4.55□□□□□ -1.68
GYPB-212ENST00000511198 MICU2Q8IYU8 434 aa4.55□□□□□ -1.68
GYPB-212ENST00000511198 FAM9CQ8IZT9 166 aa4.55□□□□□ -1.68
GYPB-212ENST00000511198 SIGLECL1Q8N7X8 197 aa4.55□□□□□ -1.68
GYPB-212ENST00000511198 ASCC1Q8N9N2 400 aaKnown RBP4.55□□□□□ -1.68
GYPB-212ENST00000511198 FNDC5Q8NAU1 212 aa4.55□□□□□ -1.68
GYPB-212ENST00000511198 APCDD1LQ8NCL9 501 aa4.55□□□□□ -1.68
GYPB-212ENST00000511198 PLPP5Q8NEB5 264 aa4.55□□□□□ -1.68
GYPB-212ENST00000511198 ZPLD1Q8TCW7 415 aa4.55□□□□□ -1.68
GYPB-212ENST00000511198 BLOC1S5Q8TDH9 187 aa4.55□□□□□ -1.68
GYPB-212ENST00000511198 SLC13A3Q8WWT9 602 aa4.55□□□□□ -1.68
GYPB-212ENST00000511198 FAM162AQ96A26 154 aa4.55□□□□□ -1.68
GYPB-212ENST00000511198 TADA1Q96BN2 335 aa4.55□□□□□ -1.68
GYPB-212ENST00000511198 LGALS12Q96DT0 336 aa4.55□□□□□ -1.68
GYPB-212ENST00000511198 ELP4Q96EB1 424 aa4.55□□□□□ -1.68
GYPB-212ENST00000511198 IMP4Q96G21 291 aaKnown RBP4.55□□□□□ -1.68
GYPB-212ENST00000511198 PDLIM5Q96HC4 596 aaKnown RBP4.55□□□□□ -1.68
GYPB-212ENST00000511198 LINC00615Q96LM1 132 aaPredicted RBP4.55□□□□□ -1.68
GYPB-212ENST00000511198 PPP3R2Q96LZ3 170 aa4.55□□□□□ -1.68
GYPB-212ENST00000511198 ZFP3Q96NJ6 502 aa4.55□□□□□ -1.68
GYPB-212ENST00000511198 B9D2Q9BPU9 175 aa4.55□□□□□ -1.68
GYPB-212ENST00000511198 BPESC1Q9GZL8 116 aa4.55□□□□□ -1.68
GYPB-212ENST00000511198 MMP28Q9H239 520 aa4.55□□□□□ -1.68
GYPB-212ENST00000511198 MARCH7Q9H992 704 aa4.55□□□□□ -1.68
GYPB-212ENST00000511198 BPIFA1Q9NP55 256 aa4.55□□□□□ -1.68
GYPB-212ENST00000511198 ACOT13Q9NPJ3 140 aa4.55□□□□□ -1.68
GYPB-212ENST00000511198 ABCB10Q9NRK6 738 aa4.55□□□□□ -1.68
GYPB-212ENST00000511198 SNTG1Q9NSN8 517 aa4.55□□□□□ -1.68
GYPB-212ENST00000511198 PLCXD1Q9NUJ7 323 aa4.55□□□□□ -1.68
GYPB-212ENST00000511198 DCAF13Q9NV06 445 aaKnown RBP4.55□□□□□ -1.68
GYPB-212ENST00000511198 RBM22Q9NW64 420 aaKnown RBP eCLIP4.55□□□□□ -1.68
GYPB-212ENST00000511198 HPF1Q9NWY4 346 aa4.55□□□□□ -1.68
GYPB-212ENST00000511198 NUDT4Q9NZJ9 180 aa4.55□□□□□ -1.68
GYPB-212ENST00000511198 C1RLQ9NZP8 487 aa4.55□□□□□ -1.68
GYPB-212ENST00000511198 OPTCQ9UBM4 332 aa4.55□□□□□ -1.68
GYPB-212ENST00000511198 PCTPQ9UKL6 214 aa4.55□□□□□ -1.68
GYPB-212ENST00000511198 SAMD4AQ9UPU9 718 aaKnown RBP4.55□□□□□ -1.68
GYPB-212ENST00000511198 MOKQ9UQ07 419 aa4.55□□□□□ -1.68
GYPB-212ENST00000511198 TRAPPC4Q9Y296 219 aa4.55□□□□□ -1.68
GYPB-212ENST00000511198 SLC6A5Q9Y345 797 aa4.55□□□□□ -1.68
GYPB-212ENST00000511198 RBMX2Q9Y388 322 aaKnown RBP4.55□□□□□ -1.68
GYPB-212ENST00000511198 ATG4BQ9Y4P1 393 aa4.55□□□□□ -1.68
GYPB-212ENST00000511198 COMMD10Q9Y6G5 202 aa4.55□□□□□ -1.68
GYPB-212ENST00000511198 V9GYQ6 96 aa4.55□□□□□ -1.68
GYPB-212ENST00000511198 NINQ8N4C6 2090 aa4.55□□□□□ -1.68
GYPB-212ENST00000511198 MUC4Q99102 2169 aa4.54□□□□□ -1.68
GYPB-212ENST00000511198 A0A075B6Q4 140 aa4.54□□□□□ -1.68
GYPB-212ENST00000511198 A0A0G2JPF8 293 aa4.54□□□□□ -1.68
GYPB-212ENST00000511198 TRBV11-1A0A0K0K1C0 115 aa4.54□□□□□ -1.68
GYPB-212ENST00000511198 CENPXA8MT69 81 aa4.54□□□□□ -1.68
GYPB-212ENST00000511198 HNRNPCL3B7ZW38 293 aa4.54□□□□□ -1.68
GYPB-212ENST00000511198 PTGES3LE9PB15 166 aa4.54□□□□□ -1.68
GYPB-212ENST00000511198 E9PQ18 207 aa4.54□□□□□ -1.68
GYPB-212ENST00000511198 H0YGG7 62 aa4.54□□□□□ -1.68
GYPB-212ENST00000511198 H7C417 338 aa4.54□□□□□ -1.68
GYPB-212ENST00000511198 AIREO43918 545 aa4.54□□□□□ -1.68
GYPB-212ENST00000511198 TRIM3O75382 744 aaPredicted RBP4.54□□□□□ -1.68
GYPB-212ENST00000511198 SEC22BO75396 215 aa4.54□□□□□ -1.68
GYPB-212ENST00000511198 OR2J2O76002 312 aa4.54□□□□□ -1.68
GYPB-212ENST00000511198 FADS2O95864 444 aaKnown RBP4.54□□□□□ -1.68
GYPB-212ENST00000511198 EPOP01588 193 aa4.54□□□□□ -1.68
GYPB-212ENST00000511198 SLC4A1P02730 911 aa4.54□□□□□ -1.68
GYPB-212ENST00000511198 MT-ND1P03886 318 aa4.54□□□□□ -1.68
GYPB-212ENST00000511198 IL6P05231 212 aa4.54□□□□□ -1.68
GYPB-212ENST00000511198 HNRNPCL4P0DMR1 293 aa4.54□□□□□ -1.68
GYPB-212ENST00000511198 NCF1P14598 390 aaPredicted RBP4.54□□□□□ -1.68
GYPB-212ENST00000511198 SELEP16581 610 aa4.54□□□□□ -1.68
GYPB-212ENST00000511198 CD36P16671 472 aa4.54□□□□□ -1.68
GYPB-212ENST00000511198 TSPAN8P19075 237 aa4.54□□□□□ -1.68
GYPB-212ENST00000511198 PSMA3P25788 255 aa4.54□□□□□ -1.68
GYPB-212ENST00000511198 RCVRNP35243 200 aa4.54□□□□□ -1.68
GYPB-212ENST00000511198 SOX6P35712 828 aa4.54□□□□□ -1.68
GYPB-212ENST00000511198 CASP2P42575 452 aa4.54□□□□□ -1.68
GYPB-212ENST00000511198 XCR1P46094 333 aa4.54□□□□□ -1.68
GYPB-212ENST00000511198 FUT6P51993 359 aa4.54□□□□□ -1.68
GYPB-212ENST00000511198 MTPNP58546 118 aa4.54□□□□□ -1.68
GYPB-212ENST00000511198 ARF3P61204 181 aaPredicted RBP4.54□□□□□ -1.68
GYPB-212ENST00000511198 NCS1P62166 190 aa4.54□□□□□ -1.68
GYPB-212ENST00000511198 EEF1A1P68104 462 aaKnown RBP4.54□□□□□ -1.68
GYPB-212ENST00000511198 MRPS15P82914 257 aaKnown RBP4.54□□□□□ -1.68
GYPB-212ENST00000511198 MAD2L1BPQ15013 274 aaPredicted RBP4.54□□□□□ -1.68
GYPB-212ENST00000511198 MRGPRG-AS1Q2M3A8 158 aa4.54□□□□□ -1.68
GYPB-212ENST00000511198 ZFP69Q49AA0 526 aa4.54□□□□□ -1.68
GYPB-212ENST00000511198 C6orf136Q5SQH8 315 aa4.54□□□□□ -1.68
GYPB-212ENST00000511198 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.54□□□□□ -1.68
GYPB-212ENST00000511198 ATAD3CQ5T2N8 411 aa4.54□□□□□ -1.68
GYPB-212ENST00000511198 EEF1A1P5Q5VTE0 462 aa4.54□□□□□ -1.68
GYPB-212ENST00000511198 KDM4DQ6B0I6 523 aa4.54□□□□□ -1.68
GYPB-212ENST00000511198 ERICH5Q6P6B1 374 aa4.54□□□□□ -1.68
GYPB-212ENST00000511198 AFTPHQ6ULP2 937 aa4.54□□□□□ -1.68
GYPB-212ENST00000511198 CYP20A1Q6UW02 462 aa4.54□□□□□ -1.68
GYPB-212ENST00000511198 SUSD1Q6UWL2 747 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms