RNA–Protein interactions for RNA: ENST00000506679.5

GYPB-207, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 606 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-207ENST00000506679 KLHL28Q9NXS3 571 aa1.48□□□□□ -2.17
GYPB-207ENST00000506679 UVRAGQ9P2Y5 699 aa1.48□□□□□ -2.17
GYPB-207ENST00000506679 PISDQ9UG56 409 aa1.48□□□□□ -2.17
GYPB-207ENST00000506679 LSM7Q9UK45 103 aaKnown RBP1.48□□□□□ -2.17
GYPB-207ENST00000506679 HPCAL4Q9UM19 191 aa1.48□□□□□ -2.17
GYPB-207ENST00000506679 ST3GAL6Q9Y274 331 aa1.48□□□□□ -2.17
GYPB-207ENST00000506679 CSDC2Q9Y534 153 aaKnown RBP1.48□□□□□ -2.17
GYPB-207ENST00000506679 KCNE3Q9Y6H6 103 aa1.48□□□□□ -2.17
GYPB-207ENST00000506679 ZNF816-ZNF321PA0A0X1KG74 233 aa1.47□□□□□ -2.17
GYPB-207ENST00000506679 H0Y8G0 127 aa1.47□□□□□ -2.17
GYPB-207ENST00000506679 SGK1O00141 431 aa1.47□□□□□ -2.17
GYPB-207ENST00000506679 BPY2O14599 106 aa1.47□□□□□ -2.17
GYPB-207ENST00000506679 SOCS1O15524 211 aa1.47□□□□□ -2.17
GYPB-207ENST00000506679 DPM1O60762 260 aa1.47□□□□□ -2.17
GYPB-207ENST00000506679 CCNKO75909 580 aa1.47□□□□□ -2.17
GYPB-207ENST00000506679 SERPINA3P01011 423 aa1.47□□□□□ -2.17
GYPB-207ENST00000506679 IGKV1-17P01599 117 aa1.47□□□□□ -2.17
GYPB-207ENST00000506679 IGHDP01880 384 aa1.47□□□□□ -2.17
GYPB-207ENST00000506679 RAB3BP20337 219 aa1.47□□□□□ -2.17
GYPB-207ENST00000506679 HNRNPH3P31942 346 aaKnown RBP1.47□□□□□ -2.17
GYPB-207ENST00000506679 CASP14P31944 242 aa1.47□□□□□ -2.17
GYPB-207ENST00000506679 GPX4P36969 197 aaPredicted RBP1.47□□□□□ -2.17
GYPB-207ENST00000506679 SULT1E1P49888 294 aa1.47□□□□□ -2.17
GYPB-207ENST00000506679 ATP5IP56385 69 aaPredicted RBP1.47□□□□□ -2.17
GYPB-207ENST00000506679 ZNF816Q0VGE8 651 aaPredicted RBP1.47□□□□□ -2.17
GYPB-207ENST00000506679 CDC20Q12834 499 aa1.47□□□□□ -2.17
GYPB-207ENST00000506679 ECH1Q13011 328 aa1.47□□□□□ -2.17
GYPB-207ENST00000506679 DDX39BQ13838 428 aaKnown RBP1.47□□□□□ -2.17
GYPB-207ENST00000506679 ZMYND11Q15326 602 aa1.47□□□□□ -2.17
GYPB-207ENST00000506679 RGNQ15493 299 aa1.47□□□□□ -2.17
GYPB-207ENST00000506679 TGFBIQ15582 683 aa1.47□□□□□ -2.17
GYPB-207ENST00000506679 ZSCAN26Q16670 478 aa1.47□□□□□ -2.17
GYPB-207ENST00000506679 XKR4Q5GH76 650 aa1.47□□□□□ -2.17
GYPB-207ENST00000506679 FAM78AQ5JUQ0 283 aa1.47□□□□□ -2.17
GYPB-207ENST00000506679 DNLZQ5SXM8 178 aa1.47□□□□□ -2.17
GYPB-207ENST00000506679 CCNJQ5T5M9 372 aa1.47□□□□□ -2.17
GYPB-207ENST00000506679 ANKRD26P1Q6NSI1 321 aa1.47□□□□□ -2.17
GYPB-207ENST00000506679 SLC25A34Q6PIV7 304 aa1.47□□□□□ -2.17
GYPB-207ENST00000506679 SASS6Q6UVJ0 657 aa1.47□□□□□ -2.17
GYPB-207ENST00000506679 CCDC73Q6ZRK6 1079 aa1.47□□□□□ -2.17
GYPB-207ENST00000506679 CDR2LQ86X02 465 aaPredicted RBP1.47□□□□□ -2.17
GYPB-207ENST00000506679 NBPF5PQ86XG9 351 aaPredicted RBP1.47□□□□□ -2.17
GYPB-207ENST00000506679 OSR2Q8N2R0 312 aa1.47□□□□□ -2.17
GYPB-207ENST00000506679 OR52P1PQ8NH57 321 aa1.47□□□□□ -2.17
GYPB-207ENST00000506679 RNF139Q8WU17 664 aa1.47□□□□□ -2.17
GYPB-207ENST00000506679 C17orf50Q8WW18 174 aa1.47□□□□□ -2.17
GYPB-207ENST00000506679 PKNOX2Q96KN3 472 aa1.47□□□□□ -2.17
GYPB-207ENST00000506679 SERPINB12Q96P63 405 aa1.47□□□□□ -2.17
GYPB-207ENST00000506679 MYCBPQ99417 103 aaPredicted RBP1.47□□□□□ -2.17
GYPB-207ENST00000506679 RNF5Q99942 180 aa1.47□□□□□ -2.17
GYPB-207ENST00000506679 PKIBQ9C010 78 aa1.47□□□□□ -2.17
GYPB-207ENST00000506679 ILKAPQ9H0C8 392 aaPredicted RBP1.47□□□□□ -2.17
GYPB-207ENST00000506679 NEUROG2Q9H2A3 272 aa1.47□□□□□ -2.17
GYPB-207ENST00000506679 FGF20Q9NP95 211 aaPredicted RBP1.47□□□□□ -2.17
GYPB-207ENST00000506679 GPATCH2LQ9NWQ4 482 aa1.47□□□□□ -2.17
GYPB-207ENST00000506679 NUP50Q9UKX7 468 aa1.47□□□□□ -2.17
GYPB-207ENST00000506679 STARD10Q9Y365 291 aa1.47□□□□□ -2.17
GYPB-207ENST00000506679 TMED5Q9Y3A6 229 aa1.47□□□□□ -2.17
GYPB-207ENST00000506679 S4R3C0 116 aa1.47□□□□□ -2.17
GYPB-207ENST00000506679 AHDC1Q5TGY3 1603 aaPredicted RBP1.47□□□□□ -2.17
GYPB-207ENST00000506679 IGLV3-12A0A075B6K2 115 aa1.46□□□□□ -2.18
GYPB-207ENST00000506679 IGLV1-36A0A0B4J1U3 117 aa1.46□□□□□ -2.18
GYPB-207ENST00000506679 GLYATL1P3A0A0U1RQE8 302 aa1.46□□□□□ -2.18
GYPB-207ENST00000506679 CCDC169A6NNP5 214 aa1.46□□□□□ -2.18
GYPB-207ENST00000506679 A8MUU9 505 aa1.46□□□□□ -2.18
GYPB-207ENST00000506679 RRP8O43159 456 aaKnown RBP1.46□□□□□ -2.18
GYPB-207ENST00000506679 HMMRO75330 724 aa1.46□□□□□ -2.18
GYPB-207ENST00000506679 SNX4O95219 450 aa1.46□□□□□ -2.18
GYPB-207ENST00000506679 CCNE2O96020 404 aa1.46□□□□□ -2.18
GYPB-207ENST00000506679 UBTFL6P0CB48 400 aaPredicted RBP1.46□□□□□ -2.18
GYPB-207ENST00000506679 OR5H8P0DN80 308 aa1.46□□□□□ -2.18
GYPB-207ENST00000506679 NCF2P19878 526 aaPredicted RBP1.46□□□□□ -2.18
GYPB-207ENST00000506679 TCN2P20062 427 aa1.46□□□□□ -2.18
GYPB-207ENST00000506679 OPRK1P41145 380 aa1.46□□□□□ -2.18
GYPB-207ENST00000506679 CACNG7P62955 275 aa1.46□□□□□ -2.18
GYPB-207ENST00000506679 TWF1Q12792 350 aa1.46□□□□□ -2.18
GYPB-207ENST00000506679 SSX2Q16385 188 aa1.46□□□□□ -2.18
GYPB-207ENST00000506679 THEM4Q5T1C6 240 aa1.46□□□□□ -2.18
GYPB-207ENST00000506679 KPRPQ5T749 579 aaPredicted RBP1.46□□□□□ -2.18
GYPB-207ENST00000506679 PRR9Q5T870 116 aa1.46□□□□□ -2.18
GYPB-207ENST00000506679 PRMT9Q6P2P2 845 aa1.46□□□□□ -2.18
GYPB-207ENST00000506679 PLET1Q6UQ28 207 aa1.46□□□□□ -2.18
GYPB-207ENST00000506679 CERS6Q6ZMG9 384 aa1.46□□□□□ -2.18
GYPB-207ENST00000506679 NANOGNBQ7Z5D8 188 aa1.46□□□□□ -2.18
GYPB-207ENST00000506679 CNPY4Q8N129 248 aa1.46□□□□□ -2.18
GYPB-207ENST00000506679 LGI3Q8N145 548 aa1.46□□□□□ -2.18
GYPB-207ENST00000506679 UBE2J2Q8N2K1 259 aa1.46□□□□□ -2.18
GYPB-207ENST00000506679 NECAB1Q8N987 351 aa1.46□□□□□ -2.18
GYPB-207ENST00000506679 GATSQ8NAP1 163 aa1.46□□□□□ -2.18
GYPB-207ENST00000506679 SPATA4Q8NEY3 305 aa1.46□□□□□ -2.18
GYPB-207ENST00000506679 OR9K2Q8NGE7 335 aa1.46□□□□□ -2.18
GYPB-207ENST00000506679 RMI2Q96E14 147 aa1.46□□□□□ -2.18
GYPB-207ENST00000506679 TPD52L3Q96J77 140 aa1.46□□□□□ -2.18
GYPB-207ENST00000506679 CAMK2N2Q96S95 79 aa1.46□□□□□ -2.18
GYPB-207ENST00000506679 ZNF382Q96SR6 550 aa1.46□□□□□ -2.18
GYPB-207ENST00000506679 PLIN2Q99541 437 aa1.46□□□□□ -2.18
GYPB-207ENST00000506679 METTL7AQ9H8H3 244 aa1.46□□□□□ -2.18
GYPB-207ENST00000506679 DDX19AQ9NUU7 478 aaKnown RBP1.46□□□□□ -2.18
GYPB-207ENST00000506679 PSMC3IPQ9P2W1 217 aaPredicted RBP1.46□□□□□ -2.18
GYPB-207ENST00000506679 AKNAQ7Z591 1439 aa1.46□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms