RNA–Protein interactions for RNA: ENST00000506368.5

SCLT1-208, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-208ENST00000506368 PPT1P50897 306 aa14.37□□□□□ -0.11
SCLT1-208ENST00000506368 F2RL1P55085 397 aa14.37□□□□□ -0.11
SCLT1-208ENST00000506368 PPP1R1AQ13522 171 aa14.37□□□□□ -0.11
SCLT1-208ENST00000506368 POM121L1PQ3SYA9 428 aa14.37□□□□□ -0.11
SCLT1-208ENST00000506368 ZNF425Q6IV72 752 aa14.37□□□□□ -0.11
SCLT1-208ENST00000506368 C1QL4Q86Z23 238 aa14.37□□□□□ -0.11
SCLT1-208ENST00000506368 EXD3Q8N9H8 876 aa14.37□□□□□ -0.11
SCLT1-208ENST00000506368 RCBTB1Q8NDN9 531 aa14.37□□□□□ -0.11
SCLT1-208ENST00000506368 TMED6Q8WW62 240 aa14.37□□□□□ -0.11
SCLT1-208ENST00000506368 GAS2L1Q99501 681 aaPredicted RBP14.37□□□□□ -0.11
SCLT1-208ENST00000506368 FKRPQ9H9S5 495 aa14.37□□□□□ -0.11
SCLT1-208ENST00000506368 LAMP5Q9UJQ1 280 aa14.37□□□□□ -0.11
SCLT1-208ENST00000506368 VSIG4Q9Y279 399 aa14.37□□□□□ -0.11
SCLT1-208ENST00000506368 A0A1W2PRU2 124 aa14.36□□□□□ -0.11
SCLT1-208ENST00000506368 SYNDIG1LA6NDD5 238 aa14.36□□□□□ -0.11
SCLT1-208ENST00000506368 URADA6NGE7 173 aa14.36□□□□□ -0.11
SCLT1-208ENST00000506368 RHPN2P1A8MT19 583 aa14.36□□□□□ -0.11
SCLT1-208ENST00000506368 CCSO14618 274 aa14.36□□□□□ -0.11
SCLT1-208ENST00000506368 SCGNO76038 276 aa14.36□□□□□ -0.11
SCLT1-208ENST00000506368 F12P00748 615 aaPredicted RBP14.36□□□□□ -0.11
SCLT1-208ENST00000506368 ADH1AP07327 375 aa14.36□□□□□ -0.11
SCLT1-208ENST00000506368 ADRB3P13945 408 aa14.36□□□□□ -0.11
SCLT1-208ENST00000506368 FSTP19883 344 aa14.36□□□□□ -0.11
SCLT1-208ENST00000506368 RAB6AP20340 208 aa14.36□□□□□ -0.11
SCLT1-208ENST00000506368 RPS15AP62244 130 aaKnown RBP14.36□□□□□ -0.11
SCLT1-208ENST00000506368 LEG1Q6P5S2 330 aa14.36□□□□□ -0.11
SCLT1-208ENST00000506368 ADGRE4PQ86SQ3 457 aa14.36□□□□□ -0.11
SCLT1-208ENST00000506368 OR10R2Q8NGX6 335 aa14.36□□□□□ -0.11
SCLT1-208ENST00000506368 TSEN15Q8WW01 171 aaKnown RBP14.36□□□□□ -0.11
SCLT1-208ENST00000506368 EDARADDQ8WWZ3 215 aa14.36□□□□□ -0.11
SCLT1-208ENST00000506368 OR8D1Q8WZ84 308 aa14.36□□□□□ -0.11
SCLT1-208ENST00000506368 C4orf45Q96LM5 186 aa14.36□□□□□ -0.11
SCLT1-208ENST00000506368 SYT4Q9H2B2 425 aa14.36□□□□□ -0.11
SCLT1-208ENST00000506368 XKR8Q9H6D3 395 aa14.36□□□□□ -0.11
SCLT1-208ENST00000506368 WDR76Q9H967 626 aa14.36□□□□□ -0.11
SCLT1-208ENST00000506368 DZANK1Q9NVP4 752 aa14.36□□□□□ -0.11
SCLT1-208ENST00000506368 ADAM18Q9Y3Q7 739 aa14.36□□□□□ -0.11
SCLT1-208ENST00000506368 PCDHGA1Q9Y5H4 931 aa14.36□□□□□ -0.11
SCLT1-208ENST00000506368 A0A087WUJ7 227 aa14.35□□□□□ -0.11
SCLT1-208ENST00000506368 A0A1B0GVT2 93 aa14.35□□□□□ -0.11
SCLT1-208ENST00000506368 M0QYG6 137 aa14.35□□□□□ -0.11
SCLT1-208ENST00000506368 TXNDC12O95881 172 aa14.35□□□□□ -0.11
SCLT1-208ENST00000506368 HTR2CP28335 458 aa14.35□□□□□ -0.11
SCLT1-208ENST00000506368 SCGB2B2Q4G0G5 96 aa14.35□□□□□ -0.11
SCLT1-208ENST00000506368 FNDC3BQ53EP0 1204 aaKnown RBP14.35□□□□□ -0.11
SCLT1-208ENST00000506368 DNLZQ5SXM8 178 aa14.35□□□□□ -0.11
SCLT1-208ENST00000506368 PRSS54Q6PEW0 395 aa14.35□□□□□ -0.11
SCLT1-208ENST00000506368 LILRA6Q6PI73 481 aa14.35□□□□□ -0.11
SCLT1-208ENST00000506368 MAMDC2Q7Z304 686 aaPredicted RBP14.35□□□□□ -0.11
SCLT1-208ENST00000506368 LIPHQ8WWY8 451 aa14.35□□□□□ -0.11
SCLT1-208ENST00000506368 HOXB13Q92826 284 aaPredicted RBP14.35□□□□□ -0.11
SCLT1-208ENST00000506368 WNT2BQ93097 391 aa14.35□□□□□ -0.11
SCLT1-208ENST00000506368 SLC6A7Q99884 636 aa14.35□□□□□ -0.11
SCLT1-208ENST00000506368 SULT4A1Q9BR01 284 aa14.35□□□□□ -0.11
SCLT1-208ENST00000506368 SELENOIQ9C0D9 397 aa14.35□□□□□ -0.11
SCLT1-208ENST00000506368 DNAJB12Q9NXW2 375 aaKnown RBP14.35□□□□□ -0.11
SCLT1-208ENST00000506368 CACFD1Q9UGQ2 172 aa14.35□□□□□ -0.11
SCLT1-208ENST00000506368 IKZF2Q9UKS7 526 aa14.35□□□□□ -0.11
SCLT1-208ENST00000506368 RPH3AQ9Y2J0 694 aaPredicted RBP14.35□□□□□ -0.11
SCLT1-208ENST00000506368 PCYT1BQ9Y5K3 369 aaPredicted RBP14.35□□□□□ -0.11
SCLT1-208ENST00000506368 PSMD9O00233 223 aa14.35□□□□□ -0.11
SCLT1-208ENST00000506368 NKX2-2O95096 273 aa14.35□□□□□ -0.11
SCLT1-208ENST00000506368 CD2P06729 351 aa14.35□□□□□ -0.11
SCLT1-208ENST00000506368 FCGR3AP08637 254 aa14.35□□□□□ -0.11
SCLT1-208ENST00000506368 CPT2P23786 658 aa14.35□□□□□ -0.11
SCLT1-208ENST00000506368 CD1CP29017 333 aa14.35□□□□□ -0.11
SCLT1-208ENST00000506368 MAS1LP35410 378 aa14.35□□□□□ -0.11
SCLT1-208ENST00000506368 CD81P60033 236 aa14.35□□□□□ -0.11
SCLT1-208ENST00000506368 ACTR1AP61163 376 aa14.35□□□□□ -0.11
SCLT1-208ENST00000506368 CDK3Q00526 305 aa14.35□□□□□ -0.11
SCLT1-208ENST00000506368 PLAURQ03405 335 aa14.35□□□□□ -0.11
SCLT1-208ENST00000506368 DLX2Q07687 328 aaPredicted RBP14.35□□□□□ -0.11
SCLT1-208ENST00000506368 ZNF627Q7L945 461 aa14.35□□□□□ -0.11
SCLT1-208ENST00000506368 C12orf76Q8N812 135 aaPredicted RBP14.35□□□□□ -0.11
SCLT1-208ENST00000506368 RAB7BQ96AH8 199 aa14.35□□□□□ -0.11
SCLT1-208ENST00000506368 INSM2Q96T92 566 aaPredicted RBP14.35□□□□□ -0.11
SCLT1-208ENST00000506368 CST11Q9H112 138 aa14.35□□□□□ -0.11
SCLT1-208ENST00000506368 C5orf51A6NDU8 294 aa14.34□□□□□ -0.11
SCLT1-208ENST00000506368 ELOA3DA6NLF2 546 aaPredicted RBP14.34□□□□□ -0.11
SCLT1-208ENST00000506368 MBTPS2O43462 519 aa14.34□□□□□ -0.11
SCLT1-208ENST00000506368 ALOX12BO75342 701 aa14.34□□□□□ -0.11
SCLT1-208ENST00000506368 FGF19O95750 216 aa14.34□□□□□ -0.11
SCLT1-208ENST00000506368 FOSL2P15408 326 aa14.34□□□□□ -0.11
SCLT1-208ENST00000506368 SULT1A2P50226 295 aa14.34□□□□□ -0.11
SCLT1-208ENST00000506368 RAB1AP62820 205 aa14.34□□□□□ -0.11
SCLT1-208ENST00000506368 PMPCAQ10713 525 aa14.34□□□□□ -0.11
SCLT1-208ENST00000506368 ELOA3BQ3SY89 546 aa14.34□□□□□ -0.11
SCLT1-208ENST00000506368 BIVMQ86UB2 503 aa14.34□□□□□ -0.11
SCLT1-208ENST00000506368 ELOA3Q8NG57 546 aa14.34□□□□□ -0.11
SCLT1-208ENST00000506368 ASB17Q8WXJ9 295 aa14.34□□□□□ -0.11
SCLT1-208ENST00000506368 RSC1A1Q92681 617 aa14.34□□□□□ -0.11
SCLT1-208ENST00000506368 ARRDC3Q96B67 414 aa14.34□□□□□ -0.11
SCLT1-208ENST00000506368 ZDHHC12Q96GR4 267 aa14.34□□□□□ -0.11
SCLT1-208ENST00000506368 NRTNQ99748 197 aa14.34□□□□□ -0.11
SCLT1-208ENST00000506368 MACROD1Q9BQ69 325 aa14.34□□□□□ -0.11
SCLT1-208ENST00000506368 HRH4Q9H3N8 390 aa14.34□□□□□ -0.11
SCLT1-208ENST00000506368 TMEM231Q9H6L2 316 aa14.34□□□□□ -0.11
SCLT1-208ENST00000506368 RAB18Q9NP72 206 aa14.34□□□□□ -0.11
SCLT1-208ENST00000506368 UFSP2Q9NUQ7 469 aa14.34□□□□□ -0.11
SCLT1-208ENST00000506368 SPACA6W5XKT8 324 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms